Ictalurus furcatus (blue catfish): 128607431
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Entry
128607431 CDS
T09387
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04217
Necroptosis
ifu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128607431 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128607431 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128607431 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128607431 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128607431 (si:dkey-32e23.4)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
128607431 (si:dkey-32e23.4)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
128607431 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
128607431 (si:dkey-32e23.4)
RhoA-dependent endocytosis
128607431 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
128607431 (si:dkey-32e23.4)
Retention of mitochondria
128607431 (si:dkey-32e23.4)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128607431 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
FeoB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
128607431
NCBI-ProteinID:
XP_053480259
LinkDB
All DBs
Position
5:complement(3989392..4008167)
Genome browser
AA seq
658 aa
AA seq
DB search
METLIPIINRLQEVFLTVGAEVIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVPALEERRKQENGIKAEEWGTFLHCKHQVFTDFTEIRNEIEEETDRIANNK
GISAEPIHLKIYSPNVLNLTLVDLPGITKVPVGDQPEDIETQVQEMILSFISNPNSLILC
VSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEVLLGRIIPVRLGIIG
VVNRSQHDLNTQKSVADACRDEQAFLQRYYPSLASRCGSRHLARTLSRLLMHHIRECLPE
LKARVTTLSAQFQARLSSYGQPVEDYSATLLQIVTKFASDYCNTIEGTARHIQTSELCGG
ARICYIFHETFGRTLQSIDPLGGLTELDVLTAIRNATGPRPALFVSEVSFELLVKKQIKR
LEEPSLRCVELVHEELQRIIQHCSSHSTQELLRFPKLHESIVEVVTSLLRKRLPITNEMV
HNLVAIELAYINTKHPDFTDAAQVSASVNSQQTESLDGGKRWKNDKMLSEEKGSVPGFGS
PTKAVNLLDTALPISRKLSAREQRDCEVIQRLIKCYFLIVRKNIQDSVPKAVMHFLVNFV
KERLQSELVGQLYKQPLLQELLIESQETAQQRTEVAHMLEALQKANNIISEIRETHLW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagactttaatccccatcattaaccggctgcaggaggtctttctcaccgtcggagcc
gaggtcattcagctccctcagatcgtcgtagttggctcacagagcagtgggaagagttct
gtgctggaaagtctggtcggacgagattttttaccccgtggttcaggaatagtcacgcgg
cgccctctagtgttgcagcttgtcaacgtcccggcactggaggagcgccggaaacaggag
aatggaatcaaagctgaggagtggggaaccttccttcactgcaaacaccaggtttttacg
gatttcaccgaaattcgaaatgaaatcgaggaggagactgaccgcatcgctaacaacaag
ggtatcagcgcagaacccatccacctgaagatttactcccctaacgttctaaacctcacc
ttggtcgacttgcctggaatcaccaaggtgccagttggtgaccagccagaagatattgag
actcaggttcaggagatgatcctgtccttcatctccaaccctaactccctgattctgtgt
gtatctccggctaactcagacctggccacttcagacgcactaaaactggcccgtgaggtc
gaccctgatggtcggagaactctgctcgtcgtgagtaaactcgatctgatggatgctggg
acggacgcactggaggttctgcttggacgcatcattcctgtcaggctcggcatcattggc
gtggtcaacaggagccagcatgacttgaacactcagaaaagtgtagcagatgcgtgccgt
gacgagcaggcgttcctgcagcgctactatccgtctttagcgtcacgctgtggctcacgc
cacctggcacgcacgctgagccgtctgctcatgcaccacatccgcgagtgtctgcccgag
ttaaaggcacgcgtgacgacgctgagtgcccagttccaggcgcgtctgagcagctacggg
cagccagtggaagactacagcgccaccctgctgcagatcgtcaccaagtttgcttcggac
tactgcaacaccatcgagggcacggcccgacacatccagacctctgagctatgcggcggc
gctcggatctgttatatattccacgagacgtttggccgaaccctgcagtccatcgacccg
ctgggaggactcaccgagctggacgtcctcacggccatccgaaacgccacgggtccacgg
ccagcgctgtttgtttctgaggtgagctttgagctgctggtgaagaagcagattaagaga
ctggaggagccgagcctgcgctgcgtggagctcgtccacgaggagctgcagaggatcatc
cagcactgctcgtcccacagtacacaggaactgttgcgctttcccaaactgcatgagtca
atagtagaggtggtgaccagtttactcaggaaacgtcttccaatcaccaatgaaatggtc
cataatctagtggcaatagaacttgcgtacatcaacactaagcacccagacttcacagat
gctgcacaagtgtctgcttctgtcaacagccaacagactgagtcactagatggaggaaag
cgctggaagaacgataagatgttgtcggaggaaaaaggctcagtgcctggatttggaagc
cctaccaaagcagtcaacctattggacacggccctgccgatctctcgaaagctgagtgca
cgtgagcagcgggactgcgaggtcatccagcgcctcatcaagtgctacttcctcattgtg
cgcaagaacatccaggacagtgtgcccaaagcagtgatgcacttcctggtgaactttgtg
aaggagcgtctgcagagcgagcttgtgggtcagctgtacaagcagcctctgctgcaggag
ctgctcattgagtctcaggaaacggcacagcagcgcactgaggtcgcccacatgctggag
gcgctccagaaagccaacaacattatctccgagatccgagagacccacctgtggtag
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