Ictalurus furcatus (blue catfish): 128607542
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Entry
128607542 CDS
T09387
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128607542 (rbm39b)
Spliceosome [BR:
ifu03041
]
Common components
Common spliceosomal components
General mRNP proteins
128607542 (rbm39b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
128607542
NCBI-ProteinID:
XP_053480449
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All DBs
Position
5:complement(6326471..6335259)
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AA seq
496 aa
AA seq
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MADDFDIEAMLEAPYRKGDSKSYSANGYEEHSRKKRHSRSRSPSAERRRSRSRERKKGRD
KRKSRSREKKRSRSREQHPSRSHERHGRYRGHKSPHRKRSRSKSPFKKEKSPIRKPIDNL
SAEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEAT
SVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAALNLQKGNAGPMRLYVGSLHFNITE
EMLRGIFEPFGRIESIQLIMDSETGRSKGYGFISFADAECAKRALEQLNGFELAGRPMKV
GHVTERSDGSSASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAKHALQMSG
SIPFGNLPGVISAPSMNQAMNLPTQPLATHCLQLSNMFSPQGENEPGWDIEIQDDVIEEC
NKHGGVVHIYVDKNSTQGNVYVKCPSIPAAMAAVSALHGRWFAGKMITAAYVPLPTYHNL
FPDSVTAIQLLRPTRR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatatcgaggcaatgcttgaagcgccttacaggaagggtgacagc
aagtcctatagtgcaaatggctatgaggagcacagcaggaagaaaaggcacagtcggagt
cgaagcccgagtgccgaacgccgcaggagtaggagcagagagcgcaagaagggcagagac
aagcgtaagagccgcagccgggagaagaagcgatcacgtagcagagagcagcacccttct
cgaagtcatgaaaggcatggacgttatagaggtcacaaaagcccccaccgcaaacgctct
cgaagcaagagcccatttaagaaagagaagagtccaataaggaaacctattgataatctg
agtgcggaggagagagatgcccgcacggtattctgcatgcagctggctgccagaatcaga
cccagagacctggaggaattcttctctgctgtgggcaaagtgcgtgatgtgaggatgatt
tcagacagaaactctcgcagatctaagggtattgcatatattgagtttgtggaggccacc
tccgtgcccctggctattggactgacagggcagaggttgctgggagtgccgatcatcgtt
caggcctcgcaggccgaaaaaaacagagcagcggcagcggcagcagcccttaacttgcag
aaaggcaacgcggggccaatgcggctctatgtgggttccctgcacttcaacatcaccgag
gaaatgctcagaggcatattcgagccatttgggaggattgaaagcatccagttgatcatg
gacagcgagacgggcaggtcaaaaggttatggctttatatcgtttgcagatgctgaatgt
gccaagagggccctagagcagctgaacggttttgagctggctggccggcccatgaaggtg
ggtcatgtgacggagcgctcagatggctcatcagccagctctttcttggacaacgatgag
ctggagagaacaggcatcgacttgggcaccacgggccgcttgcagctgatggcccgactt
gcagaaggtacagggctgcagattcctccagccgcaaagcacgctctgcagatgagcggc
tctattccgtttggtaaccttcctggagtgatctctgcaccaagcatgaaccaggccatg
aacctccccacccaacccctggcaactcactgcctacagctttccaacatgttcagccca
cagggagaaaacgagcctggctgggatatagagattcaggatgatgtcattgaagagtgc
aataaacatggaggcgttgttcatatatatgtagacaagaattctactcaaggtaacgtg
tacgtgaagtgtccgtctattccggccgccatggctgctgtcagtgccctacatggacgc
tggtttgcaggcaaaatgatcaccgctgcctatgtacccctcccaacctaccacaacctg
tttcctgactcagtcacagccatacagctgctgagacccacacgccggtga
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