Ictalurus furcatus (blue catfish): 128607582
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Entry
128607582 CDS
T09387
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128607582 (ybx1)
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128607582 (ybx1)
03041 Spliceosome [BR:
ifu03041
]
128607582 (ybx1)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
128607582 (ybx1)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128607582 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
128607582 (ybx1)
Spliceosome [BR:
ifu03041
]
Common components
Common spliceosomal components
General mRNP proteins
128607582 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
128607582
NCBI-ProteinID:
XP_053480528
LinkDB
All DBs
Position
5:complement(7673225..7678526)
Genome browser
AA seq
311 aa
AA seq
DB search
MSSEAETQQQQPPQPADDEESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRN
DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKY
AADRNRYRRYPRRRGPPRDYQDNYPSDGEGDKREAGDSAGESDQQPRKPTFPGRRRYPPY
YVRRRYGRRPPYTNAPPRGEMTEGGEGDENQGGPDQGNKPVRQNYYRGYRPRFRPRGPPR
PRPAREGEEDKENQGEGSQNQEPRQRRYRRNFNYRRRRPQTTKPQDGKDGKAADTSSDKS
AAPEAEQGGNE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgaaacacagcagcagcagccgccgcagcctgccgacgacgaggag
agcccatccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaacaaag
gtcctggggacagtgaagtggttcaacgtaagaaatggctatggtttcatcaacaggaat
gacacgaaagaagacgtctttgtacatcagactgcgataaagaagaataacccaaggaaa
tacctccgcagtgtaggggatggagagactgtggagtttgatgtggttgaaggagaaaag
ggtgccgaggcagccaatgtgactgggccaggcggcgtgcctgtacagggcagcaaatat
gcggccgacaggaacaggtatagacgctacccacgcaggaggggtcccccacgtgactac
caggacaactacccaagtgatggagagggagacaagagggaggcaggagacagcgctggt
gaaagtgatcagcagccgcgcaaacccaccttccccggcaggagacgctaccccccatac
tacgtgagaagacgctatggccgcagacccccctacaccaacgctccacccaggggagag
atgactgagggtggtgaaggtgatgagaaccagggtggtccagaccagggcaataaacca
gtgagacagaactactacagaggctaccgaccaaggttcagaccaaggggcccacctcga
ccccggcctgcgcgggaaggggaagaggataaggagaaccagggcgagggcagtcagaat
caggagcccaggcagcgccgctaccgccgcaacttcaactaccgccgcagacggcctcag
accaccaagccccaggacggcaaagacggcaaggcagccgatacatcaagcgacaaatca
gccgctcccgaggctgaacagggcgggaatgagtag
DBGET
integrated database retrieval system
