Ictalurus furcatus (blue catfish): 128607590
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Entry
128607590 CDS
T09387
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128607590 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128607590 (ogg1)
Enzymes [BR:
ifu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
128607590 (ogg1)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128607590 (ogg1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
DUF7178
Motif
Other DBs
NCBI-GeneID:
128607590
NCBI-ProteinID:
XP_053480539
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All DBs
Position
5:7898249..7905914
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AA seq
394 aa
AA seq
DB search
MSQHAFLSLGAKAWRCLSCPKSQLRLDLTLGCGQTFRWHETGEGHWTGVMGGRVWTLTQT
DDTLWYHVYRRHEDPDLVNGRKRKKAENSQDSGKKLKEMADVKEEEVETSLCVLTSEQDH
KDEEVLRDYFQLSVKLEDLYKEWGDADPHFSHTGNVFTGVRMLRQDPVECLFSFICSSNN
HISRIQGMIERLCSTLGTPLCELDGTHYHDFPSIEALAESSVEARLRDLGFGYRARFLQQ
SAHMIMSDHGPKWLHTLRNTPYLQARDALLTLPGVGPKVADCVCLMSLDKSEAVPVDTHV
WQIAKRDYGYAAGGRQKTLTNKVYKEIGDFFRKLWGSYAGWAHSVLFCADLKKFQKLKEI
PTIKEEKKPAKMGKKEEKNTNCKKRVNVKKEGGD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgcttttctctcactgggggccaaggcatggcgctgcctgtcctgcccc
aaatctcaacttcgcctggacctgacactgggatgtgggcaaactttcagatggcacgag
acaggggaaggccactggacaggagtgatggggggacgagtgtggacactaactcagacg
gacgacactttatggtaccatgtatacagacgtcacgaggatccggatctcgttaacgga
cggaaaaggaaaaaagcggagaactcccaagactcagggaagaagcttaaagaaatggct
gacgtgaaggaggaagaggttgaaacgagcctttgcgtgttgacctctgagcaggatcac
aaagacgaggaggtgctgagagactatttccagttgagtgttaaactggaggacttgtac
aaagagtggggtgatgcagatccgcacttcagccatacaggcaatgttttcacaggagtg
cgcatgttgcgccaggaccctgtggagtgtctcttctcgttcatctgcagctcaaataat
cacatctctcggattcaggggatgatcgagcgtttgtgtagcacactcgggacaccactc
tgtgagctcgatggcacacactatcacgacttcccctccattgaggctttagcagagagc
agcgtagaggcacggctacgggatttgggttttggctaccgagctcgtttcctacagcaa
agtgcacacatgattatgagcgatcatggtcctaagtggctccatacactacgtaacacc
ccctacctgcaggccagagatgctctccttacactccctggtgttggcccaaaggtggcc
gactgtgtgtgtttaatgtcattggacaagtctgaagccgtccctgtagacacacatgtg
tggcagattgcgaagcgcgactatggctatgctgcaggaggtagacagaagactctgacc
aataaagtctacaaagagatcggggatttcttcagaaagctttggggatcctatgctggc
tgggcgcactctgttttgttctgtgctgatctaaagaagttccagaagctgaaagaaatc
ccgaccataaaagaagaaaagaagccagcaaagatgggaaaaaaagaagaaaagaataca
aactgtaagaagagagtgaatgtgaaaaaggaaggaggagattaa
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