Ictalurus furcatus (blue catfish): 128607697
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Entry
128607697 CDS
T09387
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128607697 (gapvd1)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128607697 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF7260
Motif
Other DBs
NCBI-GeneID:
128607697
NCBI-ProteinID:
XP_053480763
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All DBs
Position
5:13434036..13586337
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AA seq
1490 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNCEVLKTAERLYRTAWIAKQQRINLDRLIL
TSAEASPAECCLHAKVLESTQFVDGYKILGFQESIYGEFLGRLRENPRLVASCLVAGERL
NQEHTQGVIHTVFTSLYGNCIMQEDEIYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERFTPTQQERLFGEKGS
DSYCQKVQAVVESNQAKLVALVNSFIGYLKQNTYCFPQSLRWIVSQMYKSLAQVEGLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADTDDGD
PRRKSNLSKFDKSCVAAFLDVMTGGRTVETPPMSSMNLLEGLTRTVVYITNNQLLALVDF
VRRSVTTGDHLREEDHLALETLLASVPQSHAVKSNSLELTPQLSPATTPVNRKNRLPLAA
TRSRSRSNIIQDSEADASYQDPQLEVLPEEVLVISIGTSSQTMPGMMPENEVLNLQLSDD
AQGDAPADEAKLHGKPDKTLRFSLCSDNLEGVSEGPSNRSNSVSSLDMEAESVSDLGPGP
SVSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSD
FDPNIDEDRLQEISGAMVENMLGSLLCFPAPGPVLLDPCGSTMSETTSEAWSVEVLPSDS
ETADLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSIISGISVTSEDIPNKVED
LRSECSSDFGGKDSVTSPDGEDSAHGAHGLSCVPAQTDSLLTMFDPLSSGEAPSDKSIDI
SGKPWQLPAEESGQYCPPSMRSCFPPAGTGTIVRPKAHYTRPPHPPPDPPIPEACATGPS
EPRASLFSAHDPEHPKQRHSYPERLVRSRSTDIVCAGRRPNSDPGINRRTMVEDQDQAVA
FAAGSTTSPNKDSLKVEIDDKKDSDDEKSDRNRPWWKKRFVPAIPKVLYWTAESEMPAPI
AAFRKRDKHEKDDLGAEKVPQGMSDEPSLLGQGCQAQAVEDILDKYRNIKRTSPSEGSTP
STYDVPDMCKEGEREHKSHRNEGLQNISTDDLTDSASQVAQPQDSKFSFSDAKKKLRLAL
CSADSVVFPIMPTVTRNGLPDHADPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETMRCV
SRLDPRTCRKLLTAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLEKLLQRVLRDKEVANRY
FTTVCVRLLLEHMESRMQDFIRAFQGFTAADDKTAAVEDFLRYLYGAMAHDVIWQYASEE
QLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQVLQEHISRLSKVVTANHKALQIPEVY
MREAPWPTAQAEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVF
VLIKANPPCLLSTIQYICNFYASQLSGEECYWWMQFTAAVEFIKTIDERK
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaaacaggagaggctatacgtg
gcttcagagaaacagcttatccagcggctcaattgtgaagtactaaagacagcagaaaga
ctctatcgtacagcctggatagccaaacaacagaggattaaccttgatcgcctcatcctc
accagtgctgaggcatccccggctgaatgctgcttgcatgctaaggtgttagagagtacg
cagtttgttgatggctacaagattctgggctttcaggagagtatctatggagagttcctt
ggccggctgagggaaaatccacgcttggtggcatcctgtctggttgctggggagagactt
aaccaagaacatacacaaggagtgatccatactgtgtttacctcactttatggcaactgc
ataatgcaagaggatgaaatctacctactacaagtcctgcgttacctagttgagttcgag
cttaaggagagtgataatcctcgtcgtttgctacggcggggcacatgtgcttttagtatc
ctgtttaagctattctctgagggcctgtactctgccaagctattcctcactgccacctta
catgagcccattatgcagctactggtggaggatgaagaccacctagagactgatccagcc
aaagtgactgaaagattcaccccaacacaacaggagcgtctgtttggggagaagggttct
gattcttactgtcaaaaggttcaggcagttgtagaatccaaccaagccaaacttgtggct
cttgttaactcatttattggctatttgaagcaaaatacctactgcttccctcagagcttg
cgctggatcgtgtcacagatgtacaagtcactggcccaagtggaagggctggaggttggg
gaggtgaggaccatgtgcacagacctgttgctgacttgtttcatctgcccagccattgtt
aaccctgaacagtatggaatcatctcagatgctcccattaatgaagtggcacgctttaac
ctaatgcaggtggggcaattgctacagcagctagccatggctgacacagatgatggagat
cctcgacggaaaagcaatttgtcgaaatttgacaaaagttgtgtcgctgcctttttggat
gtcatgactggtggaagaactgtggagacccctcccatgtcttcaatgaaccttttagag
ggtctcacacgaactgtggtttatatcacaaacaatcagcttctggctttggtggacttt
gtgcgccgcagcgtgactactggtgaccatctcagagaggaagaccatttagctctggaa
acactgctagccagtgtacctcagtcccatgcagtcaagagtaacagcttggagctcaca
cctcagctttccccagctactacacctgtcaacaggaagaacagattgcccttggcagcc
acccgtagccgctcccgctccaacatcattcaggacagtgaggcagacgctagctaccag
gaccctcagctggaagttttgcctgaggaggtgcttgtcatctcaataggaacttcctct
cagactatgcctggaatgatgcctgaaaatgaggtgctgaacttgcaactttctgatgat
gctcaaggagatgccccagctgatgaagctaaactgcatggaaaacctgacaaaaccctc
cgcttctctctatgtagtgacaatctggaaggagtctctgaggggccatctaaccgttcc
aactctgtctcatctctggacatggaagcagagtctgtgtctgacttaggcccagggccg
tccgtcagtaatggtgttgaagctttgcagctactagaacatgaacaagccaccacgcag
gataatctggatgataaactcagaaagtttgagattcgggacatgatgggtctgacagat
gatcgggatatctctgagacagtcagtgaaacctggagcactgatgtccttggtagtgac
tttgatcctaatatagatgaagacagacttcaggaaatatcaggggctatggtggagaac
atgcttggaagtctgctgtgcttcccagcacctggccctgttcttttggacccctgcggt
tcaacaatgtctgagaccacaagtgaggcctggagtgtggaagtcctgcccagtgactca
gagactgcagatttaaagcaagaggagcgcttgcaggaattagaaagctgctcaggggtg
ggcagcacttcagatgatactgaagtcagagaggtcagctcccgaccaagcaccccagga
ttaagcatcatctcaggtattagtgtaacatctgaagatatccccaacaaggttgaagac
ctgcgctcagaatgtagctcagattttggaggcaaagactctgtcacaagcccagatgga
gaggattctgcacacggagcacatggtttgtcctgtgtgcctgctcaaactgactctctg
ctgaccatgtttgatccactctcttctggagaagcacctagtgacaaatctatcgacatt
tcgggcaaaccttggcaacttcccgcagaagagagtggccagtactgccccccaagcatg
aggtcctgctttccacccgcaggtactggcactatagttcggcccaaggcacattacacc
agaccccctcatcctcccccagacccaccaatcccagaggcttgtgccacaggaccttct
gaacccagggcatctctcttctccgcccacgatccagagcaccccaagcagagacactca
taccctgagcgtttggttaggagccgcagcacggacatagtctgtgcagggcgcagaccc
aacagtgatccaggcataaaccgcaggaccatggtggaggaccaggaccaagcggttgct
tttgctgctggatccaccacttctccaaacaaagattcactcaaagtggagattgatgac
aagaaggacagcgatgatgagaaatcagacaggaacagaccctggtggaagaaacggttt
gttcctgccattcctaaagtgctctattggactgcagagagtgaaatgccagcaccaatc
gcagcattccgaaagcgggataagcatgagaaggatgatctgggagcagagaaggtccct
caaggtatgtcagatgagccttcgttactggggcagggctgtcaggctcaagcagtagaa
gacatattggacaaatacaggaacatcaagagaaccagcccaagtgagggatcaacaccg
tccacctatgatgtaccagatatgtgtaaagagggtgaacgtgaacataaatcccataga
aatgagggcctgcagaacatctctacggatgacctgacggactctgccagccaggtggca
cagcctcaggacagcaagttttcctttagtgatgctaagaagaaattacgtctggctctg
tgctctgcagattcggttgtttttcctattatgcccactgtaacacggaatggcctcccc
gaccatgcagatcctgaggataatgagattgtgtgctttctgaaagtgcagctggcagag
gctattaacttgcaggataaaaaccagatggctcagatccaggagaccatgcgttgtgtc
agtcgcctcgacccacgcacctgcagaaagctcctcacagcaattgctgaggactacaga
aagcgggctccatacatagcgtatttgacacggtgccggcagggactacagacttctcag
gctcatctagagaagctgttgcagagagtacttagagataaagaagtggccaaccgctat
tttactactgtctgtgtccgactgcttctagaacatatggaatccaggatgcaggacttt
atcagagcatttcagggctttacagcagctgatgataagactgcagcagtggaggatttc
ctgcgttacctctatggtgcaatggcgcatgatgtcatctggcagtatgccagtgaggaa
cagctacaggatgcccagatggctattgaacgtagtgtcatgaatcgcatcttcaaattg
gctttctacccaaaccaggatggagacattctgcgagaccaggttctgcaagagcatatt
agtcgtctgtccaaagtagtgactgccaaccacaaggccctacaaatcccagaggtgtat
atgagagaggctccatggcctactgcacaggcagagatcaggacgatcagtgcatacaag
acacctcgtgataaagtgcagtgcatcctgcgcatgtgctccaccatcatgaatctgctc
agcttggccaacgaggatgctgtgcctggagctgatgactttgtccctgtgcttgtattt
gtccttataaaggcaaacccaccctgccttctgtccaccattcagtacatatgtaatttc
tatgccagtcagctgagtggggaggagtgctattggtggatgcagttcacagccgctgtt
gaatttattaaaaccattgacgagcgcaagtga
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