Ictalurus furcatus (blue catfish): 128607715
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Entry
128607715 CDS
T09387
Symbol
polb
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128607715 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128607715 (polb)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128607715 (polb)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
128607715 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128607715 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
128607715
NCBI-ProteinID:
XP_053480803
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All DBs
Position
5:complement(14316527..14330024)
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AA seq
341 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANYEKNVNRATHKYNAYRKAASVIAKYPNKIKSGNEAK
KLDGVGAKIAEKIDEYLTTGKLRKLEKVLSSHIRNDDTSSSINFLTRVTGIGPAAARKFY
DEGVKTLDDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMEKMEALILQELGQLDPEYIG
TICGSYRRGAESSGDIDILLTHPDFTSQSQKQPWLLHAVLEHLESIGFVTDTLSKGDTKF
MGVCQLQRGVKDEKDYDHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLN
EYTIRPLGVTGVPGEPLLVDSEKDIFDYIHMKYREPKERSE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaagcaccgcaagaaactttaaacgagggaatcacggactttcttatt
gaattggccaattatgaaaaaaatgtaaatcgggctacccataagtacaatgcatacaga
aaagctgcttctgtgattgctaagtacccaaataaaatcaaaagtggcaatgaagccaag
aaactggatggggttggtgcaaagattgctgaaaaaattgatgagtatttaaccacaggg
aaactccgcaaactggaaaaggtcttaagttcacatattcgcaatgatgacaccagctcc
tctatcaactttttaactagagtgactggaataggcccagctgctgctaggaagttctat
gatgaaggtgtcaagaccctagatgatctaaagaagattgaacataagctgaaccatcat
cagcagattggccttaaatattttgaagaatttgagaagagaattccccgctcagagatg
gagaaaatggaggctttaatattacaagagttggggcagctcgacccggagtacattggc
accatctgtggcagctacagacgaggtgcagagtcgagtggtgatattgatatactgctg
actcatccagactttacctcccaatctcaaaaacaaccctggctgctccatgcagtgttg
gagcaccttgagtctattggctttgtcactgatactttgtccaaaggagatacaaagttc
atgggtgtatgccagctgcaaagaggagtcaaggatgagaaggattatgatcatcgccgt
attgatatcaggcttattcctaaggatcaatattactgtggtgtgctctacttcactggg
agtgatatattcaataagaatatgagaacccatgcgcttgagaaaggcttcacccttaat
gagtacactattcgtccactaggagtaactggtgtgcctggagagcccttactggtggac
agtgagaaggacatttttgactacatccacatgaaatacagagagccaaaagaacgcagt
gaatga
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