Ictalurus furcatus (blue catfish): 128607845
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Entry
128607845 CDS
T09387
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128607845 (apex2)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
128607845 (apex2)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
128607845 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
128607845
NCBI-ProteinID:
XP_053481032
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Position
5:complement(19526939..19530670)
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AA seq
584 aa
AA seq
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MKIVTWNINGIRTFKNGIKSALDSFDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRTGYSGVATFCKDSATPFAAEEGLTGRLVNHGEAVGCYGDQGDFSIEELQTLDNEGRAV
ITQHKFKHSLEAEGSETLTVINVYCPRADPEKPERKLFKLQFYKLLQSRAEAIVGPRSHV
IILGDINTSHQPIDHCDPDDVENFEDNPGRKWLDSFLFELAENGNDEEDGSEPSLNCVSG
GKFIDTFRYFHPTRTNAFTCWSTRTGARQTNYGTRIDYIFANRLLVETNLLNADIMPEVE
GSDHCPIWAKLSCTFVPSPRCPALCTCYMPEFMGKQQKLLRFLVKVSGQHTDGRDIEKPL
PGSQEVGEIRENLSPLAVGVSSGSKRPSDGLPESSTFKGKKSKQAKKATKPQGNLLTFFK
PKLTPVLSSSQSLSSGENTETCFKSEGVMPEIHEGTENYVNSCIATHSMLTEDHTEVKVK
GETNNLSISKTKEDEERCQDQLQSNTMLNQETKKGSCPDFWKSVLHGPPQPPRCNAHDEL
CVLRTVKKPGPNLGRQFFVCARPQGHSSNPQARCNFFAWVDKRK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcacttggaacataaatggcataagaacctttaaaaacgggataaagtct
gcgcttgactcgttcgacgctgatataatatgcgttcaggaaaccaaagtgacgcgcgat
ctgctggacgaaaggacagcaattgtggatggatacaactcttacttcagctttagccga
ggacgcactggctactcgggggtcgcgacgttttgtaaagactccgccaccccattcgcc
gcagaagaaggattgacaggtcgccttgtcaaccatggagaggctgtcggttgctatggt
gatcagggggacttctccatagaggagctccagacacttgataatgaaggacgagccgta
atcacccaacacaagttcaagcattcgctggaagcagaaggatctgagaccctgactgtc
atcaatgtgtattgcccacgtgcagatccagaaaagccagagagaaagctttttaaactg
cagttttacaaactcttacaaagcagagctgaggcaattgtcggacctcgaagtcatgtg
atcatattgggtgatataaacacctctcaccagccaatagaccactgtgacccagatgat
gtggagaactttgaggacaatccaggcagaaagtggttggacagcttcctgtttgagctg
gcagaaaacgggaatgatgaggaggatggttctgagccctctctgaattgtgtgtctggt
ggtaaatttattgacaccttccgatatttccatcctacacgtaccaatgccttcacatgc
tggtctacacgtacgggtgcgaggcaaaccaactacggcacccgcatcgactatattttt
gccaatcgtttactagttgagacaaacttactgaatgcagatatcatgccagaagtggag
ggttctgatcactgtcccatatgggctaaactaagttgtacttttgtacccagtcctaga
tgcccggctctgtgcacctgttatatgcctgagttcatggggaagcagcagaaactcttg
cgctttcttgttaaggtttctggacaacacacagatggcagagacattgaaaaacctttg
cctggatctcaagaggttggggagattcgtgagaacctcagtcctctagcagtaggtgtc
agttctgggagcaagagaccttcagatggattaccagagtcatctacattcaaggggaaa
aaaagcaaacaagctaaaaaggcaactaaacctcaaggcaatctcctgaccttctttaaa
cctaaattgacccctgtattatcttcaagccagagcctaagctcaggtgagaacacagag
acatgtttcaaaagtgagggagtcatgcctgagatccacgaaggtacagaaaattatgtc
aacagctgcatagcaacccacagtatgcttacagaggaccacactgaggtgaaagtgaag
ggtgaaacaaataacttaagcatctcaaagactaaggaagacgaagagcgttgtcaggat
cagctccaaagcaacaccatgctcaaccaggagaccaagaaaggatcctgtccagacttt
tggaaatcagttttgcatggaccaccccagccgccacggtgtaacgcgcacgacgagctg
tgcgtgctgcggactgtgaagaaacctggaccaaatttgggccgtcagttttttgtatgt
gctcgtcctcagggccactcgtccaacccacaggcaaggtgtaatttcttcgcctgggtg
gacaaacgcaaatag
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