| Entry |
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| Symbol |
xpc
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| Name |
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
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| KO |
| K10838 | xeroderma pigmentosum group C-complementing protein |
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| Organism |
ifu Ictalurus furcatus (blue catfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ifu00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128608049 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ifu03400]
128608049 (xpc)
DNA repair and recombination proteins [BR:ifu03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128608049 (xpc)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:26135846..26150322
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| AA seq |
897 aa
MAKRKHRADAAATEKDNTKKKLSQAVKKRKAAPKTPSIKDKGTKAKNVAKPRGQASKKAD
KPTDEKKSKYFSEPLKEEPEDIFEDSSMSPPESSVLKSSDYKMKEEKKESDIESDESDDD
EDWEEVEELAGPLAPTEADQEPAVPSQPVEIEIETAEARHKRQKKEKIQAEFEIYLRRMM
KRFNKGIQEDTHKVHLLCLLASGLFRNRLCCEPDLLAITLSLVPTHFTKVIKKRINTVYL
EGLLKWFKVTFTLNPALPEEKDVGLRKLLERRLGSLSARDHQEMTYLFLLVLRSLHLYCR
LVLSLQPLPLKPSTNMDKAPTSSSSSSKVKSNEADKKPPEPKVSPGSKRPSTPSIEGQPK
RGGKRQKRNVADGGNKEKEAVGGQRPKNTKRRSIASKVSYKEVSSDGEDELSDGEEYKPT
REDESDDSDCDAKRSNRYSKAKGKGKSQAPLHSSKPQKRTKKEEEEETDEEEEQLKGKKQ
YGRRRQVKGDDEWIEVYLKGAKRWICVDVDQGVGQPERCSNKATQPITYVVGVDEDGYLK
DVSSRYDPTWLTSSRRRRIDSDWWEETLSFYECPDTKQKQEEDKELQDKLIGKPLPKVIS
EYKNHPLYALERHLLKYEALYPPTAAILGYCRGEAVYSRDCIHTLHSRDIWLKKARTVRL
GEEPYKMVKGCSNHSRKARRMSENKDKKDLGLFGHWQTEEYQPPAAINGKIPRNEFGNVY
MFQPCMLPVGCVHVHLPNLNRVARKLNLDCAPAVTGFDFHGGHSHAVIDGYIICKEHEEI
LKAAWENEQEIQRKKEKEKREKRALANWKLLVKGLLIKERLQRRYGQQGVAKDTGIAEGS
SSGEEDEGGAHTAPPSLAVSWPQNRQEEKEEGGAKKSVSKRERRGQHKHLFPFEKRV |
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| NT seq |
2694 nt +upstreamnt +downstreamnt
atggctaaacgtaaacaccgggcagatgctgctgcgactgaaaaggacaacacaaagaag
aagctgagtcaggctgtgaagaagagaaaagctgctcctaaaacgccgagtatcaaagac
aaaggtaccaaagccaaaaatgttgccaagcccagaggccaagcatcgaaaaaggcagat
aagccaacagatgaaaagaagagcaaatacttcagcgagccattaaaagaagagccagag
gacatctttgaggattccagcatgtcacctccagagagttctgtgctgaagagcagtgat
tacaagatgaaagaagagaaaaaagaaagtgatattgagagtgacgagagcgatgatgat
gaggattgggaggaggtggaagaactggcaggcccattagccccaacagaggcagaccaa
gaacctgcagttccttctcaacctgtggaaattgagattgagacagctgaggccaggcac
aagagacagaaaaaggagaagatccaagctgagtttgagatttacctgcgcagaatgatg
aaacgtttcaacaaggggatacaggaggatacacacaaggttcatctgttatgtttattg
gctagcggactgttccggaaccgcctgtgctgtgagcctgacctattggccatcactttg
tccttagttcccacccacttcaccaaagttattaaaaaacgtatcaacactgtttatctg
gagggtcttctgaagtggtttaaggtgacattcacactaaaccccgccctccctgaagag
aaggacgtgggactgcgtaagctgctggagagacgtttgggaagtctgtcagcacgtgat
catcaggagatgacctatctgttcctgctggtgctgaggtcactgcacctctattgtcga
ttggtgctctcactacagccattacccctcaaaccttcaacaaacatggataaagcaccc
acctccagtagtagttcttctaaagtcaaatctaatgaagctgataaaaagccaccagaa
ccaaaagtttcccctgggtccaaacgcccatctaccccaagtattgaggggcaaccgaag
aggggaggaaagagacaaaaaaggaatgttgcggatggagggaacaaagagaaagaagca
gtagggggacaaaggccaaaaaacaccaaaagaaggagtatcgcatccaaagtgtcatat
aaagaagtgagcagtgacggggaggatgagcttagtgatggggaggagtataagccgaca
agagaggacgaaagcgatgactcggattgtgatgcaaaaaggtcaaacaggtattcaaaa
gctaagggaaagggcaaaagtcaggctccactacactccagcaagccccagaagagaaca
aagaaggaggaggaggaagaaacagatgaagaagaagaacagctaaaagggaaaaagcag
tatgggagaaggaggcaagtaaaaggagatgatgaatggatagaggtgtacctgaaaggg
gcaaagagatggatatgtgttgatgttgatcaaggggtggggcaaccggaacgctgctcc
aataaggctactcagccaattacgtacgtagtgggtgtagatgaagacggttacctgaaa
gacgtgagcagcagatacgaccccacctggctcacgtcgtcacggagacgacgtatcgac
tcagactggtgggaggagacgttaagcttctacgagtgtcccgatactaaacaaaagcag
gaagaagacaaagagctgcaggacaagttgattggtaagccattgccaaaagtgatatcg
gagtacaaaaaccatcctctgtatgcactagagaggcacctgctgaagtacgaggcactg
tacccccccactgccgccattttgggctactgtcgaggagaagctgtctattcacgagat
tgtatccacacactgcattccagagacatctggttaaagaaagcgcgcactgtccgactc
ggggaggagccttacaagatggtaaagggctgctccaaccactcacggaaagccaggagg
atgtctgagaacaaggataaaaaggacctgggcctgttcggccactggcaaaccgaagag
taccagcctcccgcagccatcaatggcaagattccacgtaacgaatttggaaacgtgtac
atgtttcaaccatgcatgttgccagtggggtgtgtgcacgtgcatctgcctaatctgaac
agagtggctcgaaaactcaacctggactgtgctcctgcagtaacaggcttcgatttccat
ggaggacactcacatgctgtaattgacggctacatcatctgtaaggaacacgaagagatt
ctgaaagctgcctgggaaaacgagcaagagattcaaaggaagaaggaaaaagagaagcgt
gagaagcgagcattggctaactggaagctgctggtgaaagggctgctgattaaagagcgg
ctgcagcggcgttacggacagcagggcgtggccaaggacacgggcattgcggaaggatcc
tcatctggagaggaggacgaaggtggagctcacacggctcccccatctctggctgtttca
tggccacagaacaggcaggaggagaaggaagagggaggagctaaaaagtctgtcagtaag
agggagaggcgtggccagcacaaacatctcttcccttttgaaaaacgtgtgtga |
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