Ictalurus furcatus (blue catfish): 128608084
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Entry
128608084 CDS
T09387
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03420
Nucleotide excision repair
ifu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128608084 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
128608084 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128608084 (ercc8)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128608084 (ercc8)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128608084 (ercc8)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
128608084 (ercc8)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_SCAP
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
Ge1_WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
128608084
NCBI-ProteinID:
XP_053481468
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Position
5:26726460..26737303
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AA seq
397 aa
AA seq
DB search
MLSFLTARQTGLDDPVRLRRAESTRRVLSLELNHDRDVERIHGNGVNCIDIEVIEGRYML
SGGSDGVIVIYDLENCSKKSHYTCKSVCTVGRSNRHVHNFSVETVQWYPYDTGMFVSSSF
DKSMKVWDTETLKPADVFEFDGNVYCHHMSPIARKHNLIAVGTKDPKVQLCDLKSGSRIH
ILQGHRGEILSVQWSPRYEHILATASADGRVRMWDVRRAAGSLFTLDQYNGDKSKASSEA
VNTAHNGRVNGLRFTDDGLYLLTTGTDDRMRLWNSATGHNTLVNYGKVVNESRKGVKFTV
SRGCSPEFAFVPCGSSITVYSLYTGKLVTTLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRQPDVEDEGKRGGDQAAVNPAFEDAWSSDED
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctttcttacagccagacaaacaggtttggacgatcctgtacgcttgagacga
gcagaatcaacaagaagggtgctgagtttggagttgaatcatgatagagatgtggaacga
attcatgggaatggagtgaactgtatcgatattgaagtgattgaagggagatatatgtta
tcagggggttccgatggcgtaattgtgatctacgacctggaaaactgcagcaagaagtca
cattacacttgtaaatcagtttgtactgtaggcaggtcaaatcgtcatgtgcacaatttc
agtgtggagacagttcagtggtatccttatgacactgggatgtttgtatccagctcattt
gacaaaagcatgaaagtttgggacacagaaacactcaagccagctgatgtgtttgagttt
gatgggaatgtctactgccaccacatgtctcctattgccaggaaacataatctcatagca
gttggaaccaaagacccaaaagttcagctgtgtgatctgaagtctggttctcgcatccac
atcctgcagggtcacagaggagagattctctctgtccagtggtccccgcgctatgagcac
atcctggccactgctagcgctgatggcagagtgcgtatgtgggacgtccggcgagctgct
ggaagcctctttactttagatcagtacaatggggacaagtctaaagcatcttctgaagca
gtgaacacggcccataatggacgtgtgaacggcttgcgcttcactgatgatggcctttat
ctcctgaccactggcacagatgaccgtatgcgcctgtggaacagtgccacaggccacaac
acactggtcaactacggaaaggtggttaatgaaagccggaaaggagtgaagttcactgtg
tcgagaggctgcagcccagagtttgcgtttgtgccatgtggcagctccattacagtgtac
agcctttacacaggaaagctagtgacgacattaagggggcattacaataatgtggactgc
tgtgagttccacccagactatcaggagctctacagtggtgggaaggactgtaacatcttg
gcatgggttcctgtgctgcgtcaacctgatgtcgaagacgaggggaaaaggggtggagac
caagctgcagtaaatcctgcatttgaagatgcctggagcagtgatgaagactga
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