Ictalurus furcatus (blue catfish): 128608141
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Entry
128608141 CDS
T09387
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5
KO
K08538
farnesoid X receptor beta
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128608141 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128608141 (nr1h5)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128608141 (nr1h5)
Nuclear receptors [BR:
ifu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
128608141 (nr1h5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128608141
NCBI-ProteinID:
XP_053481598
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Position
5:28511167..28524466
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AA seq
489 aa
AA seq
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MREWMDPEMGMMTGGYLSGADAYGMAEPQYYDVLVDPLGYSYQDLDLQAFPYSQQHYNPT
NVQVSVYGPPSSQPCNPAYPYSPQCPEPPCPADVELHEQVRGGMGTTPGMKRPRLGPGAR
VRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGSCEMDMYMRRKC
QDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGAKHRGDSLSVLTAEDEESNESRNVSSTS
RLPAPARVPSGLSREQKCVLNRIVEAYRRYRAQDGTRVRVSQGSCLQDGADRLTDLTPLE
IDRLLQFSKSIPGFELLDSADQSILLSSSSVEVMFLLLAQQFTENPSLYTSSLYPGNVSD
SSHSWVKTSQSKTNSHEMLLNSGMSEELLGPVLNFFHSMAAISVTDAEYALLVATSVLCS
DRPYLCAVSCVENLQEFILELLSKVCRNGQGTTHGPCRFARLLGRLTELRTLHHNHLTLR
PQQIWDMQH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggatggatcctgagatgggcatgatgaccggaggctacctctctggagca
gatgcttacggcatggcagaaccgcagtactatgatgtgctggtggatccgttgggatat
tcataccaggaccttgatctacaggcttttccctacagccagcagcactacaatccaaca
aacgtgcaagtctctgtgtatggaccccccagctctcaaccgtgtaacccagcgtacccg
tacagcccgcagtgtccggagcctccgtgtccagcagacgtggagctgcacgagcaagtg
agaggaggtatgggtacgacaccgggcatgaagcgaccccggctggggcctggagctagg
gtcaggggtcaggatgaactctgcgtggtgtgtggggacaaagcttcaggataccactac
aatgctctgacctgtgaaggctgcaaaggcttcttcaggcgcagcgtcaccaagaaggct
gtgtatcggtgcaagagtggtggcagctgcgagatggacatgtacatgcgtcgcaagtgc
caagactgccgactgcgcaagtgtcgagctgtcggcatgctagccgagtgtctgctgact
gaggtacagtgccagtcaaagaggttaagaaagggggccaagcaccgaggcgactcactt
tcggtgctcaccgctgaggatgaggaaagcaatgaaagcagaaatgtgtcctctaccagt
agactacctgcaccagcacgggtgccatcaggattgtccagagagcagaaatgtgtcctg
aacagaattgtggaagcttatcgtcggtacagagctcaggatggcactcgtgtccgggtg
tcccaaggatcctgtttacaagatggtgctgatcggttgaccgacttgacccctctagaa
atagatagacttctgcagttctcaaagagcatacctgggtttgagctcttggatagtgct
gatcaaagcattcttctctccagctcgtctgtggaggtcatgttcctgctcttggctcaa
cagtttactgagaatccgtccctgtacacctcatctctgtatcctggcaatgtgagtgac
tccagtcacagctgggtgaaaacctcacagtctaagaccaacagtcatgagatgctatta
aactcaggaatgagtgaggaactcttggggcctgtgctgaatttcttccacagtatggca
gccatctcagtgacggatgctgaatacgctcttctcgttgctacttcagtgctgtgctca
gacagaccctatctgtgtgcagtgagctgtgtagagaacctgcaggaatttattctggag
ctgctttccaaagtgtgcaggaacgggcagggtacgactcacgggccatgccgtttcgcc
aggctgcttggccggctaacagagctgaggacgctgcaccacaaccacctcacactccga
ccgcagcagatctgggacatgcagcattga
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