Ictalurus furcatus (blue catfish): 128608179
Help
Entry
128608179 CDS
T09387
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a
KO
K14960
COMPASS component SPP1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128608179 (cxxc1a)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128608179 (cxxc1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
128608179 (cxxc1a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
128608179 (cxxc1a)
COMPASS/SET1 complex (yeast)
128608179 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
128608179
NCBI-ProteinID:
XP_053481674
LinkDB
All DBs
Position
5:complement(30228316..30234889)
Genome browser
AA seq
571 aa
AA seq
DB search
MDSETSEFELHSGPEMSTNQGNAPVYCICRKPDINCFMIGCDNCNEWFHGDCINISEKMA
KSIRVWYCEKCRSNDDSLETKFRSKKSRERESDGDDMDMDGQFENDTPDFKNDRRRGSRI
KRSARMCGECEPCMRTEDCALCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEEE
FSMSKGQERFQSDYPLSDEYSENELELYQQYCAGKYADQGWNSDEDDGPYLDSTLRKRAV
KVKHVKRREKRSEKKKEENKPRKHKPKQKHRDKVRHSERTEARDSGEVRQCLGPGCVESA
RPNSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLLERIRREQQLARTRL
TDMEKRFHELEGIIAKAKQQVVQHDEEVNEGDDDTDLQIFCVSCSHPVNPKVALRHMERC
YSKYESQTSFGSMYPTRIEGATRLFCDVYNTQSKTYCKRLQVLCPEHSRDPKVPADEVCG
CPLVRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRIA
MTNRAGLLALMLHQTIQHDPHSTDLRANKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgagacttcagagtttgagctgcattcaggaccggagatgagcacgaaccag
ggcaacgctccagtttactgcatctgtcgcaaaccagacatcaactgcttcatgatcggt
tgtgacaactgcaatgagtggtttcatggcgactgcattaatatatccgagaagatggca
aaatccattagggtgtggtactgtgaaaaatgtcgcagtaacgacgactctttagagacc
aaatttcgttccaagaaaagccgggagagagagtcagacggagacgacatggacatggac
gggcagtttgagaacgacacgcctgattttaagaacgatcgcagacgtgggtcacggatt
aagcgctcggcgcgcatgtgcggggagtgtgagccctgcatgcggacagaggactgcgct
ctgtgtgacttctgtaaggacatgaagaagtttggtgggcccaacaagatcaggcagaag
tgcaggctccggcagtgtgaagtgcgcgcccggaaaatgctgcgtgtgaaggaagaggag
ttctccatgtctaaaggccaagagcggttccagtccgactaccccctgtcagacgagtac
agcgagaacgagctggagctctaccagcagtactgcgccggcaaatacgcagaccagggc
tggaacagtgatgaagacgacggtccgtatcttgattccaccttgcgaaagagagccgtg
aaggtcaagcatgtgaagaggagagagaagcggtctgagaaaaagaaagaggagaataag
ccccgtaaacacaaaccgaagcagaaacacagggacaaagtgaggcacagtgagaggaca
gaagcgcgagacagcggtgaagtcaggcagtgcctcggaccaggctgcgtcgaatcggcg
cgtcccaactccaagtactgctccgatgactgtggcatgaagctcgctgccaaccgaatc
tatgagatcctccctcagcgtatccagcagtggcagcagagcccctgcatcgccgaagag
cagggaaagaagcttctggaacgcatccggcgcgagcagcagttagcccggacacggctc
acggacatggagaaacgttttcatgagttagaaggcatcatcgctaaggccaagcagcag
gtcgtccaacacgacgaagaggtgaacgaaggagatgacgacacagaccttcaaattttc
tgcgtctcctgcagtcacccggtcaaccccaaggtggcgctacgtcacatggagcgatgc
tattccaaatacgagagtcagacatcatttggctccatgtatcccacacgcatagagggt
gcaacgaggttgttctgtgacgtgtacaatactcaaagcaaaacatattgtaaaaggctt
caggtcctctgtcctgagcactcccgagatccaaaggttccagcagatgaggtgtgcgga
tgtcctttggtgcgtgacgtctttgagcccacgggcgagtactgccgagtatcgaaacgc
aagtgcaacaaacactactgctgggagaaactccgccgggccgaggtggacctggagaga
gtgcgagtgtggtacaagttggacgagttgttcgaacaggaacgcaacgtccgaatagcg
atgacgaatcgcgccggtctcctggctcttatgctacatcagacaattcaacatgaccca
cattcaacagacctgcgcgccaacaaagacagatag
DBGET
integrated database retrieval system
