Ictalurus furcatus (blue catfish): 128608187
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Entry
128608187 CDS
T09387
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03083
Polycomb repressive complex
ifu04980
Cobalamin transport and metabolism
ifu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128608187 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128608187 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128608187 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128608187 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128608187 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128608187 (hcfc1b)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128608187 (hcfc1b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
128608187 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
128608187 (hcfc1b)
MLL-HCF complex
128608187 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128608187 (hcfc1b)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128608187 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
128608187
NCBI-ProteinID:
XP_053481696
LinkDB
All DBs
Position
5:30409381..30432309
Genome browser
AA seq
1855 aa
AA seq
DB search
MVFSFHFVKGEMASSGTNTTSSASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVV
FGGGNEGIVDELHVYNTATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYS
NDLYELQASRWEWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIP
RYLNDLYTLELRPGSSVAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGC
RLGDLWTLDIDTLTWNKPAISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHE
KEWKCTNTLACLNLDTMTWETILMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAW
NNQVCCKDLWYLETDRPLAPSRVQLVRANTSSLEVSWGAVPTADAYLLQLQKYEIPAATT
ASSPSVTPTSSLPSNSPKSPAPAAAAPASQSVPVTGVTLIPQVPSPTASMPVSPLAAASP
RGPAILKVAAPQSAAGTSIVTVRQANQVGKSPVTVASLPAGVRMVVPAQSAQGTPIGSSP
QMSGMAALAAAAAATQKIPPSSSATMLNVPAGATIVKTVAVTPGSAALPATVKVASPVTV
SNPATRMLKTAAAQAGTSTITTPNTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTIT
LVKSPLTVGSGGTLISSLGKVMSMVQTKPVQTAAVTGQAGSPVTQIIQTKGPLPAGTILK
LVTSADGKPTTIITTTQGGGTGTKPTILGISPTTTNKPGTTIIKTIPMSAIQQGAAGLSY
RKFGATSSTGIKSPITIITTKMMTPGTPGKIITAVPKLATGTAQQGVTQVVLKGAPGQPG
TILRTVPMGGVRLVSPGTVSAVKPTVTTLVVKGTTGVTTLGTVTGTISTSLAGGNVPTAN
ASLATPITTLGTIATLSSQVISPTAITVSAAQTNLTTAPTVAIQAATQPTQVTLISTPSG
VEAQQDLPVSILASPTSEQPSTTGAEAGDTPGEVTLVCSNPPCETHETGTTNTATTASAK
IGTERVCSNPPCETHVTGTTNTTTTASSDMGRVQQVCSNPPCETHETGTTNTSTQASSNM
GSAETNTVQRVCSNPPCETHETGTTNTATQASSSMGSGETNTVQRVCSNPPHETHETGTT
NTATQASLSMGSGETNTVQRVCSNPPHETHETGTTNTATQASSSMGSGETNTVQRVCSNP
PCETHETGTTNTPTQASSTIGSGQNGTVQRVCSNPPCETHETGTTNTATTATSSLESAEG
TAQQSGNGQDAGTSAEATSSTEPANPPIQSRAITTVTQATPTPGPSVPEISSMAGSVAVV
EGSGEAEAMEQGDSEAVAMGEEPMQTEGELGEDGAVRVVAIEEGAAGEAGTMLQVHVAME
AQPGQGEQAEMEQGGEGAEAVALAGQDSEALALPQELMSAEGQQTTLMVTGLTPEELAVT
AAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDSGQDGQQTTTIPIVLTQQELAALV
HQQQQLQEAQAAAAAAAAAAQQLAADSGTATLPTEGLAPADSLNDPMTESNGHEMAAAAV
TAAVAQLLPSTSAETLAPSSTLAPSQPMVVASPAKIQAATTLAEVANGIESAAGKPGVPP
AVVKPPVKKENQWFDVGIVKVTNTVVTHYYVPADDSEVTDDDSGAIPDYSQMKKVELSPG
TAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGK
IIEYSVYLAIQSSQTTEAKASAPAQLAFMRVYCGPNPSCLVQTSSLSNAHIDYTTKPAII
FRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSSPDTKGTGPKKARADQ
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttcttttcattttgtgaagggggaaatggcttcttctggtaccaacaccaca
tcgagcgcttcgggctccgtgttgcagccgaggtggaagcgggtgctcggatggtccggc
ccagtacctcggcctcgtcacggccaccgcgccgtcgccattaaagagctgatggtggtt
ttcggcggcggcaacgaaggaatcgtggacgaacttcatgtatacaacacagcaactaat
cagtggtttatcccggctgtccggggcgacgtgccacccggctgtgctgcatatggattt
gtgtgtgacggcacccgcctgttggtgttcgggggaatggtcgaatatggaaagtacagc
aacgatctttatgaactacaggccagtagatgggagtggaaacggctgaagcctaaagct
ccaaagaatggccctcctccttgtccacgcctgggccacagcttctccctcgtggggaat
aaatgctacctattcggcggacttgccaacgacagcgaagatcccaaaaacaatattcca
agatacctgaatgacctgtacacactcgagctgcgtccgggctccagcgtggcaggctgg
gacatccccatcacatacggcgtgcttcctcctcctcgcgagagccacacagccgtagtg
tacacagagaaaacctcaaagaagtctcgcctcgttatctacggaggcatgagtggctgc
cgcctcggagacctttggacgttagatatagacacactgacttggaacaagccggcaatc
agtggcactgctccgctccctcgcagtctccactctgccaccaccataaccaacaagatg
tacgtgtttggcggttgggtgcccttggtgatggatgacgtgaaagtggctacacatgaa
aaggaatggaagtgtacaaacacactggcatgcctaaatctggacacaatgacatgggag
actattttaatggacactctggaagacaacatcccgagagccagggcaggacattgctcc
gtagccatcaactcccgactgtatgtttggagtggcagagacggctaccgcaaagcctgg
aacaaccaagtgtgctgcaaagacctctggtatttggagacagaccgtcctctggcgccc
tctcgcgtgcagttggttcgtgccaatacaagttctctggaggtgagctggggcgctgtg
cccaccgctgatgcctacctgctgcagctgcagaaatacgaaattccagcagcgacgacg
gcctcatcccccagcgtcactcccacttcctcgctgccctccaactcacccaagagcccg
gccccagccgctgcggcccctgcctctcagagcgtgcccgtcacaggggtaaccctcata
ccccaggtgccctcaccaactgcgtccatgcctgtgagcccgctcgctgcagcctcaccg
cgcggtccagccatcctgaaagtggcagcacctcagtccgctgctgggacttctattgtc
accgtgcgtcaggccaatcaagtgggaaaatccccggttacagttgcatcacttcctgct
ggagtccgaatggtcgttcctgcacagagcgcacaaggaacaccgatcgggagcagccct
cagatgagtggcatggccgctctggctgcagcggcggctgccacacagaaaatccctcct
tcgtcatcagccactatgctgaatgttccagcaggagccaccatcgtgaaaactgttgct
gtcactccaggctccgcagctcttcctgctacagtgaaagtagcctcgccagtgacggtg
agcaacccagccacccgcatgctaaagactgctgcagctcaagctggaacttctaccatc
acgacccctaacacgccaacacgtcccatcatcaccgtgcacaaatcgggcacggtgact
gtggcccagcaggctcaggtggtcaccactgtggttggaggagtcactaaaaccatcacg
cttgtcaagagcccactcactgtgggcagcggcggcactctgatctcaagccttgggaag
gtgatgtccatggtccagacaaaaccagtacagaccgctgccgtgacaggccaggctggc
agccctgtcacacagatcattcagacgaagggtcctctgcctgcaggcaccatactgaag
ctagtcacctcagcagacggcaaacccactaccatcatcactaccacacaggggggtggt
actggcacaaaaccaaccattctgggcatctcccctaccaccactaacaagcctggcacc
accatcatcaagaccataccgatgtctgccattcagcagggagctgcaggtttgtcttac
cgcaagttcggtgctaccagtagcacaggtataaagtctcctatcacgatcattacgacc
aaaatgatgacgcctggaacaccaggaaaaataatcacagcagtaccaaaactggctact
ggaactgcacagcagggagtgactcaggtggtcctgaagggggcgccagggcagcctggc
accattcttcgcactgtgcccatgggcggtgtgcgtctcgtttctcctggtaccgtttct
gctgtcaagcccacagttaccacactagtagttaaaggcaccacaggagtaactactctc
ggcactgtgaccggaacaatctcaaccagcctggcagggggcaatgttcccactgctaat
gctagcctggctactcccataaccaccctgggcaccatcgccacactctccagccaggtg
atcagccctacagctatcactgtgtctgcagcccagacaaacctgactactgcacctaca
gtggctatacaggcagctacacagcccactcaggtgacgctgataagcacccccagtggt
gttgaggcccagcaggacctccccgtgtccatcctggcctctcccacctctgagcagccc
tccaccacaggtgctgaagcaggcgacaccccaggtgaagtgactctggtctgctccaac
ccaccgtgcgagacccacgaaaccggtaccaccaacacggccaccacagcttccgccaag
atcggaaccgagcgcgtgtgctctaacccaccttgcgagacacacgtgaccggaacaacc
aacacgacaaccacggcatcatccgacatgggccgtgtgcagcaagtatgcagcaacccg
ccgtgcgaaacacatgaaacgggcactacaaacacatctacgcaggcgtcctccaacatg
ggcagtgcagagaccaacacggtacagagagtgtgttctaacccgccatgtgagacccat
gaaaccggcaccaccaacaccgctacgcaggcatcttcgagtatgggcagtggggagact
aacactgtacagagagtgtgttccaacccacctcatgaaacccacgaaacgggtaccacc
aacaccgctacgcaggcatctttgagtatgggcagtggggagactaacactgtacagaga
gtgtgttccaacccacctcatgaaacccacgaaacgggtaccaccaacaccgctacacag
gcatcttcgagtatgggcagtggggagaccaacacggtacagagagtgtgttccaaccca
ccatgtgagacccacgaaaccggcaccactaatacacctacacaggcttcatccaccatc
ggatcagggcagaatggcacggtgcagagagtgtgttccaacccaccatgtgagactcat
gagaccggcaccaccaacacggctactaccgccaccagcagcctcgagtcagccgaagga
acagcgcaacagagtggtaacggacaagacgctggcaccagtgcagaggcaacttcgtcg
acagaacctgccaatcccccgattcagagcagagccatcaccacagtgactcaggccacg
cccaccccaggaccctccgttccggaaatctcatccatggcaggctccgttgctgtagtg
gagggctctggtgaagctgaggcaatggagcagggagactctgaggcagtagcgatgggt
gaggagcccatgcaaaccgagggcgaactgggtgaagacggagctgtccgagtcgttgct
attgaggagggtgctgccggtgaggcgggcaccatgctgcaggttcatgttgccatggaa
gcacagccgggtcagggagagcaagctgagatggagcagggcggtgagggcgcggaggcc
gtagctctggcagggcaagactccgaggccttggcgctgcctcaggaactgatgtcagct
gaggggcagcagaccacgctgatggtgacaggactgaccccggaggaactggctgtcact
gctgcagcagaagctgctgctcaggctgcagccacagaagaggcccaggcgctcgccata
caggccgtgctacaggcagcccaacaggccgtgctcaatgaaggagactctggacaggac
ggtcagcagaccaccaccattcccatcgtactgacgcaacaggaactggctgctctggtc
caccaacagcagcaactccaggaggctcaagcagctgctgcagctgcagcagccgctgcc
cagcagctggcggccgattctggcacagcgactttacccaccgagggcctggcacccgca
gacagcctcaacgaccccatgaccgagagcaacggccatgagatggccgccgcagcagta
accgcagctgtggctcagcttctccccagcacttctgcagagactttggctccatcgagt
acacttgccccgtcccaacccatggtggttgccagccctgcaaagatacaggccgccact
acgcttgctgaggtggccaatggcattgagtctgcagctgggaagccaggagtgccccct
gcagtcgtgaaaccgccagtgaagaaagaaaatcagtggtttgatgtcggaatcgtcaag
gtgaccaacacggtcgtcacacactattacgtcccagcagacgattcagaggttactgat
gatgattctggggccataccagactacagtcaaatgaagaaagtggagctctctcccggc
accgcgtacaagttccgtgtggccggaatcaacgcttgtggccgtggaacgttttctgaa
gtttcggcgttcaagacctgcttgcctggcttcccaggagcaccgtgtgccattaaaatc
agcaagagccctgatggtgctcacctcacctgggaacctccgtctgtgacgtcagggaag
atcatagagtactccgtctacctggccatccagagctctcagacgaccgaggcaaaagca
tctgccccggctcagctggccttcatgcgggtgtactgtggcccaaatccctcctgccta
gtccagacctccagcctgtccaacgcccacatcgactacaccaccaaaccagccatcatc
ttccgcattgccgctcgcaacgagaagggctacggccctgctacgcaagtcaggtggcta
caagaaaccagtaaagatggatctgctgccaaacctgcagcgaagagaccggtctcatct
cctgatacgaaaggtaccggtccaaaaaaggccagagccgaccagtga
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