Ictalurus furcatus (blue catfish): 128608241
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Entry
128608241 CDS
T09387
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04382
Cornified envelope formation
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04518
Integrin signaling
ifu04810
Regulation of actin cytoskeleton
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128608241 (itgb4)
04518 Integrin signaling
128608241 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128608241 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128608241 (itgb4)
04810 Regulation of actin cytoskeleton
128608241 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128608241 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128608241 (itgb4)
04515 Cell adhesion molecules [BR:
ifu04515
]
128608241 (itgb4)
04090 CD molecules [BR:
ifu04090
]
128608241 (itgb4)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128608241 (itgb4)
Exosomal proteins of bladder cancer cells
128608241 (itgb4)
Cell adhesion molecules [BR:
ifu04515
]
Integrins
Integrin beta subunits
128608241 (itgb4)
CD molecules [BR:
ifu04090
]
Proteins
128608241 (itgb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
PSI_integrin
EGF_Teneurin
EGF_2
I-EGF_1
EGF_integrin
Fn3_PBP1
EGF_TEN
vWA_SIBA-E
I-set
SEA
Motif
Other DBs
NCBI-GeneID:
128608241
NCBI-ProteinID:
XP_053481819
LinkDB
All DBs
Position
5:33790101..33818586
Genome browser
AA seq
1917 aa
AA seq
DB search
MGRWAWHLSVVFLSLTLIGHHVISANRCAASKATSCSVCLQTGFGCAYCRDEVFGFDRCD
LLENLKSHSCALIVSVKSSMKMLKKIAIDKNLKHSQVAPQEMSMTLLPGEERVVEMEVFE
PSRGPLDLYILMDFSNSMSDDLDNLKKMGDSLATLVGTLSDDYTIGFGKFVDKVTEPQTD
MRPSKLKEPWTNSDPPFSFQHVITLTSNLNTFKEILQKERISGNLDAPEGGFDAILQAAV
CQSQIGWRQHSTHLLVFSTESAFHYEADGINVLAGILPRNDEACHLDNKGLYTHATQQDY
PSVPTLVRLLVQNNIIPIFAITNHSLSYYEKLVPYFPIAELGVLTDDSSNILNIIKIAFD
NIRSKISIQAENKPRAIGAQMLSAAGVASDYGNFSIQPGEIGKFKLLLNAKTSVNDKPVC
SLNTNERTGTIRVKPTTFSSALEIQTSVLCETCECEKFPEENAARCSGNGKLVCGTCHCY
DKWLGPFCNCSSQVSSDTSGCVEKTGEEPCNGRGDCLCGMCLCYNPNQYEGQFCQFDRSQ
CHRSGGFLCNDRGQCYMGRCVCDSGWTGDACECPLSNATCLDNKGGLCNGHGVCKCGRCE
CEYSGLELGTTCEPNFQAQLGMCEGRRSCVQCQAWKTGEMKGEKCKECLFTIKMVDELKD
RDKVIETCEYRDEEDDCTYYYTVNYPPNPTDKEHEVEVLKKKECPPGGFLWLIPLIMFLM
LLLGLLLLCCWKYCACCKACLARLFACCPCCAMGRMVGFKEDHYMLRQSLLSSDHLDTPL
VRTGPPKSTDVVRWKVKDNVHRGPNHPQNQIQPNPKEIIDFPLSLRLHRPFSDELSRPEG
RNTEILKQEVEENLNNAFRQIPGVHRVQKTRFRTQRNAGKRQNNTIVDTVLSAPRSSYRD
IVNLTDKQVQAGNFSDMKVVPGYYTVATDREATGAVELQEGVESVDVRVPLFIKDEDDDK
KQLLVEAIDVPVGIAGIGKRYVNITVIKEHAKSVLTFLQPSYTFARQDGVANIPISRDII
EDGRTQVTYCTRDLTAKDKKDYISVDGDLMYQPGETQKMVPVKLLELGEGDALLDKQSKQ
FVMDLSNPRQGAKLGKYPRTTINIADKPDPSVIMFKNTTQNFSISDALYNIPVIRTQGLE
NPSTVNWRTISSRFNLSGPVKFAPGDMEKNIVIDPRMQQIPSKPETFQLELYDPSPNSLV
RDRKTTLVNITDSKDVLTKTGSLSFKAPSPTGRIFAPTNINATATGPKKMLLNWNPQSGA
KGYKVKYWIYGDPEAEAQVVDVKSPHAELTNLYPYCDYEMRVCSYNAQGDGDYSDIVPCQ
TLEDVPSEPGRLAFNVIGPTVTQLSWAEPAEPNGVITDYEVVYTPINEDSKPIGPDKKVK
IDNPKKRMLLIENLQQSQTYRYKVRASNKVGWGPYRDATINLATQPHRPMSIPIIPDIPI
VDAEAGDDYDSFLMYSNEVLRSPTSSTRPSVSEFSEDQNINGKWDQGFLFPGGSGSLSRN
ISTSSTSYSVSPRPGGANQSVETSMTYITNKGGSVPRKHDIHTEDVIMRKRSENRTYYDN
DGVRDSIVMSDLTGGFSDILSGSSFSQTTTSYSLNSRVHNHSDDINEALQNLDRVLQDTR
LQRGVPETPSRLVFSALGPTALKVSWQEPHCEKPILKYSVLYQLLNGGEMKRLDITNPAQ
NSVVVQDLMPNQSYLFKVKAESQEGWGPEREGVITIESAVDPKSPLSPVPGSSFTLSTPS
APGPLVFTALSPETLQLSWDKPRKPNGEILGYVVTCEQLHGGGDQRSFQLSGNSATSLTV
SDLSENVPYKFKVQAQTTQGFGPEREGIITIESQDGSMGQYSSQSVMKREMFNLPSQNSS
QTTHTMFTEPFITPEGMMMSSRQVTQHTEMSGSITRQVEMVQRGVTSTVTKKQYYEA
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatgggcgtggcacctcagtgtggtatttctctctctcaccctgattggtcat
catgtcatcagtgccaatcgctgtgcagcgagtaaagccaccagctgttctgtgtgtctg
cagactggattcggctgcgcatactgtcgtgatgaggtctttgggtttgatcgctgtgac
ctgctggagaacctgaaatctcacagctgtgctctgatcgtatcggtgaagagctccatg
aaaatgttgaagaaaattgcgattgataagaacctgaaacactcccaagtggctcctcag
gagatgagtatgactctgttacctggtgaggagcgagtggtggagatggaggtgttcgag
ccatcgcgtggtccactcgacctctacatcctcatggacttctccaactccatgtctgat
gatctggacaacctcaagaagatgggggacagcctagctacgttggttgggactctctct
gatgattacacaattggattcggcaaatttgttgataaagtcactgaaccgcagacagac
atgagaccatcaaagttgaaggagccgtggacgaacagtgaccctccgttctccttccag
cacgtcatcactctcaccagtaacctcaacaccttcaaagagatcctgcagaaggagaga
atatctggcaacctggacgctcccgaggggggattcgacgccatcctgcaggccgccgtg
tgtcagtctcagatcgggtggaggcagcacagcacccatctcctcgtcttctccaccgag
tcggcgtttcattacgaagcggacggcataaacgtgttggcgggaattttgccacggaac
gacgaggcgtgtcacctggacaataagggtctgtacacgcacgccacgcagcaggattac
ccatcagtccccactctggtgcggctgctcgtccagaacaacatcatccccatcttcgcc
atcaccaaccactcgctctcctactacgagaaactggttccgtatttccccatcgcggag
ctcggagtgctgacagacgattcgtccaacatcctcaacatcatcaagatcgccttcgat
aatatccgttcgaagatcagcatccaggctgagaataaacccagagcgatcggtgctcag
atgctctcagcggccggagtcgcgtcagattacggaaacttctccatccagccgggagaa
attggtaaatttaaactgcttctgaacgctaagacgagtgtgaatgataaacccgtgtgc
agcctgaacaccaacgaacgcacggggacgatcagggtcaaacccaccacgtttagctcc
gccctcgagatacaaacctccgtcctctgtgaaacctgcgagtgtgaaaagtttccagaa
gagaatgcggctcggtgtagcggtaacggaaagctggtgtgtggaacctgccactgttat
gataaatggttgggtccgttctgtaactgctcgtctcaggtgtcctcagatacgagcggg
tgtgtggagaagacgggggaggagccatgtaacgggagaggagactgtctgtgtggaatg
tgtctgtgttacaaccccaatcagtacgaaggacagttctgtcagttcgacagatcacag
tgccacagatcaggaggattcctctgtaacgatcgaggccagtgctatatggggaggtgt
gtgtgtgatagtggatggacaggagatgcatgcgagtgtcctctcagtaatgcgacctgt
ctggacaacaaagggggtttgtgtaatggtcatggtgtgtgtaaatgtggacggtgtgag
tgtgaatactccggactagagctgggaacaacatgtgaaccaaacttccaggctcagttg
gggatgtgtgagggcaggaggagttgtgtacagtgccaggcctggaagaccggagagatg
aaaggagagaagtgcaaggaatgtctatttaccatcaagatggtggacgagctgaaggac
agagataaagtgatagagacgtgtgaatatcgtgatgaagaagatgactgcacgtattac
tacacagtgaattatcctcctaatcctactgataaagaacacgaggtggaggtgctcaag
aagaaagagtgtccccctggaggttttctctggttgattcctctcatcatgttcctgatg
ctgttgttgggcctcttactgctctgctgctggaaatactgcgcatgctgcaaggcatgt
ttggctcggctgtttgcctgctgtccgtgctgtgcgatgggtcgtatggtgggatttaaa
gaagatcactacatgctgcgtcagtctttactgagctcggatcacttggacacgccgctg
gttcggaccgggccgcctaagagcacagacgtggtgcgctggaaagtgaaagacaacgtc
caccgtggaccgaaccaccctcagaaccagatccaacccaaccccaaagaaatcatcgac
ttcccgctctcactgcggctccacagaccgttttctgacgaactttcacgtccagaaggt
cgcaacactgaaatcctcaaacaggaagtggaggaaaatctgaataacgcattcagacaa
attcccggtgttcaccgcgtgcagaaaaccagattcaggacacagagaaatgcaggaaag
aggcagaacaacacaatcgtggacacggttctctcggctcctcgttccagctaccgcgac
atcgttaacctgacggataaacaggtgcaggctgggaatttcagcgatatgaaagtagtg
ccgggttactacacagtggccacggacagagaggcgacgggggctgtggagctgcaggag
ggcgtggagtctgtggatgttcgggttccgctcttcatcaaagatgaggatgatgataag
aaacagctgctggtggaggccatcgacgttccggtgggaatcgcaggcatcggaaaacgc
tacgtcaacatcacagtgattaaagaacacgctaagagcgttctgaccttccttcagccc
tcgtacacttttgctcggcaagatggcgtagctaacatcccgattagccgtgacatcatt
gaggacggtcgcactcaggtcacctactgcaccagagacctcaccgccaaggacaagaag
gactacatctcagtagacggagatctgatgtaccagcctggagaaactcagaagatggtt
cctgtgaagctgctggagctcggggaaggagacgccctgttggataaacagtccaaacag
tttgtgatggatctgagcaacccacgtcagggcgctaaactcggcaaatacccgcgaacc
accatcaacatcgccgacaaaccagatccgagcgtgatcatgttcaagaacaccacgcag
aacttcagcatatccgatgccctctacaacatccctgtgatccgcactcagggtctggaa
aacccctccaccgttaactggcgcacaatctcctcccgcttcaacctgtccggcccggtc
aagttcgccccaggagatatggagaagaacatcgtgatcgaccctcgtatgcagcagatt
ccctccaaaccagaaaccttccagctggagctgtatgacccgagccctaatagcctcgtc
cgagacaggaagaccacgctggtcaacatcactgattccaaagatgtcttgaccaagaca
ggatctctttcatttaaagccccgtctcccactggacggatctttgctccgactaacatc
aatgctacagctacaggccctaaaaagatgctccttaactggaaccctcagtctggagcc
aaaggatataaggtgaagtattggatctacggagaccctgaagccgaagcccaggtggtg
gacgttaaaagccctcatgctgaattgacgaatctctacccgtactgcgattacgagatg
cgtgtgtgttcatataatgctcagggagacggggactacagtgacatcgtgccgtgccag
actcttgaagatgtcccaagtgaaccaggccgcctggccttcaatgtcattggcccaact
gtcacgcaactgagctgggcagaaccagcagagcccaatggtgtgatcacagattatgag
gttgtctacacacccatcaatgaggacagcaaacccattggacctgataagaaggtgaag
attgacaaccccaagaagcgcatgttgcttattgagaacctgcagcagtcccagacatac
cgctacaaagtgcgtgctagcaacaaggtgggatgggggccatacagagatgccaccatc
aatctggcaacccaacctcacagacccatgtccattcccattattcctgatattcctatt
gtggatgcagaggcgggggatgattatgacagttttctcatgtacagtaatgaagttctt
cgttcacccacctccagcaccagacccagcgtgtcagagttctccgaagaccagaacata
aacggaaagtgggatcaagggttcctgttcccaggtggaagtggttccctgtcacgcaac
atcagcacttcttcaactagctacagcgtctcaccccgccctggtggtgccaaccagtca
gtggagaccagtatgacttacataaccaacaaaggaggatctgtgcctcgcaagcatgac
atccacacagaggacgtcatcatgagaaaacgatccgaaaacaggacttattatgataat
gatggtgtaagagactccatcgtgatgagcgacttgactggaggattctctgacattcta
agcggttctagcttcagccagactacaaccagctacagcctgaactcccgcgttcacaat
cactcagacgacatcaacgaagctctgcagaacctggacagggttctccaggatactcgg
ctgcaacgtggagtccctgaaaccccaagcaggctggtgttttcagctctgggtcccacg
gcactgaaggtcagctggcaggagccccactgtgaaaagccaatattaaaatactctgtc
ctctaccagcttctcaatggaggtgaaatgaagcgcttggacatcactaaccctgcgcag
aactctgtggtggttcaggacttaatgcccaaccagtcgtacctgttcaaggtaaaagct
gagagtcaggagggttggggtccagagagagaaggagtcatcaccattgagtctgctgtc
gaccccaagagccccctcagccctgtgccagggtcttcattcactctgagcacacccagt
gctccaggtccgctggtgttcactgcattaagtccagagactctccagctcagctgggat
aaaccacgaaaacccaacggcgagatcctgggctacgtggtcacctgtgaacagctgcac
ggtggaggagatcagcgctccttccagctcagcgggaactcggccacgtctctgaccgtt
tctgatctgagtgaaaatgtaccgtataaatttaaagtacaggctcagaccacgcagggc
tttgggccggagagagaggggatcatcactatcgagtctcaggatggttctatgggtcag
tacagcagtcagtctgtgatgaagagagaaatgtttaatttgccatcacagaactcgtca
cagacaacacacaccatgttcaccgaaccctttatcacaccagaaggtatgatgatgtcg
agcagacaggtcacacagcacacggagatgagcggtagcatcacgcggcaggtggagatg
gtgcagagaggagtgacgtccaccgtcaccaagaaacaatattatgaagcctga
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integrated database retrieval system
