Ictalurus furcatus (blue catfish): 128608270
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Entry
128608270 CDS
T09387
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00310
Lysine degradation
ifu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128608270 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128608270 (prdm2a)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128608270 (prdm2a)
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
128608270 (prdm2a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128608270 (prdm2a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128608270 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
128608270
NCBI-ProteinID:
XP_053481880
LinkDB
All DBs
Position
5:23463150..23471991
Genome browser
AA seq
1546 aa
AA seq
DB search
MGDSENVKAEELLVSSEKQQQYVILHCPADSHQHSLTGESPPLHDSLKEKEREPEGGTDD
IMEQSEEDQNILPAQRIGKPTMEPVPLQTIDLINQNIPCKTGETELLEMLKQDNKSADAD
LDPDYDPKINPDGNHKGSCMFFCQHCQRRFTTKQGLERHMHALSSCHTQIFKCRYCRKCF
STQFCRRRHERRHSNTNRRAGGLIISPAPQVVVETQGMVSSQEEDQLALTAQPVSNSPVP
DVEGRGDADEFGETKCSFACKYCKKAFGTHTSLRRHERRIHERRLLPRGVRQKVVNSHEV
QIQHSGGPPETSSNTQRNDAVRQEEEYMVDISSNISENLSFYIDGKIISTSAVTNCEVME
LNSAAAVIGLDAFIVNPAQITQALKIDSNDCNMTSDLSGQSSGKRRTSTPPLLPQIKTEL
ESESILTTPSAASEGTLIGTVFPRTLETIVLQKEKTIYLSPKLKQLLQNQDSSKSSFSLI
SEGQKLCPPLSLTLLPATSSRFKRRTTSPPISPQQSSPPMLKSTVVQETDSSAPKVPKID
SHCTSAVMSSSKNGEIETVNPATNHPAETIQESLLLDCSASGTGGRSCNQQPLDLSSAVG
KRDSEVLADCVLDLSMSRKSTESDSTACLAFQTSVRRTKPNSSMLEKVLLSQYAVVDVPT
PAHETINAPLETDLAAMAVSEPIPANPESVMSELPPPSPPALDATPSLPNSAALHTASPA
QPLSATSEPTEILLPAQTSITNQEVQPICSTAQSSSTVALNTPVELSVGNSLAAFNVSLP
NWLNSAPGSVTHALIPTTPALSLQGPQYLTDTSVCELAQRTLVIDSVLSPETHLISPVLV
NQSNISSLSFSPNVVVIEYTVALESSNPTPVPQANAVHSLFDKTPPDHTEAQELQPSSQL
QAANIEPSVSELPEAGIVEAQDQVLDTSSNGESLENSVAAVLPSLGPSVSEKVETTVEPA
ENSSSTDNLKVESSDITIQQNPMSEEQLPLPPLCKRFMCNACDELFHSMKGLSQHIGEHS
GTWPYKCEFCVQLFESDTGLFEHRSSYHGIGKIYVCRICSKEFAFLCNLEQHHRDLHPGQ
ECSHTEVENGKLRPENHNCPVRADTFTKACLRKDKLSQSYQTIPKPEADNNSENTTEELY
TTIKIMASEGVKPKGTDVRLGINQHYPSFKPPPFPYHNRTPVGPVTTTATNFTTHNIPQT
FSTTVRCTKCGRGFDNMPELHKHILACANASDKKRYTPKKNPIPLKQFAKVQNGVLLPAR
GVNLRQNISQKLGQPKKLHFHEAEAKTKLSAHSKRKSMWVQRGRPVGRKSSQEELVVYVC
PHCSREFTYHASLKKHMAFSCPMKPICRKPPKRKGSIAPTQENHGRIRTRVSDVIMKPQR
LNQGQKSLAKTQTNETGSASNVNLPVKAQIGKGKITVRNYRPKTSYILSGSAVHISKKNR
LILMEATQSPLASKSLVATGKSQLQSNGVHGMERKIKQRDVELKPSTEEQFSLRVRGPVT
RSLQQVTSNVTSNTNKKANSTNPAKCLVQTDDQNVAEHQAVAESKK
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattctgagaacgtgaaagcagaggagctgctcgtttcgtcagagaagcagcag
cagtatgtaattctgcactgccccgctgatagtcatcagcattctctgactggggaatct
ccccctctacatgactcactgaaggagaaagagagagagccagagggagggactgatgac
atcatggagcagtctgaggaggaccaaaacatcttgccagcacagaggatcggtaaacca
accatggaaccagtacccttgcaaaccattgacttaataaatcaaaatataccctgtaag
acgggtgagactgaactcttggaaatgctcaaacaggacaataaatcagcagatgctgac
ctggacccagactatgaccccaagattaaccctgatggcaaccataagggttcatgcatg
ttcttctgtcagcactgtcaaagacggtttactaccaagcaaggcctggaacggcacatg
catgccttgtcatcctgccacacacagatatttaaatgccgctactgcagaaagtgcttc
agtacacagttctgccgacgtcgacatgagagaagacatagtaacaccaatagaagggca
ggtggtctcataattagccctgctccacaggttgtcgtagagactcagggaatggtctct
tcacaagaggaagaccagcttgccctgactgcccagccagtcagcaactctcctgtgcct
gatgtggaaggaagaggtgacgcggatgaatttggagagactaaatgctcttttgcctgc
aagtactgcaagaaagcatttggaactcacaccagcttgcgaaggcatgagcgcaggata
catgaacgtcgtctattgcccagaggagtccgtcagaaagttgtaaactctcatgaggtt
caaattcagcattctggtggtccgccagaaacctcttccaatacacaacgcaatgatgca
gtcaggcaagaagaggagtatatggtcgatatttccagcaacatctctgagaacctcagc
ttctacattgatgggaaaatcatctccaccagtgctgtcactaattgtgaagtgatggag
ctgaattctgccgctgctgtgattggtctggatgcctttatcgtcaacccagctcaaatt
acacaggcccttaaaatagattctaatgactgcaacatgacctctgacctcagtggtcaa
tcctctggcaaaaggaggacatctaccccacctttactgccacaaattaaaactgaactg
gagtctgaatctatcttaacaacaccttccgctgcttcagaaggtacgttgattggcact
gttttcccccggacattagagaccattgttttacagaaggagaaaactatttatctgtct
cccaagctaaagcagcttctacagaaccaggatagcagtaagtcatcattttctctgatc
agtgaaggccaaaaactctgcccacctttatcactaacacttttacctgcaacaagtagc
aggtttaagagaaggacaacatcccctcctatctccccacagcaaagcagtccgccaatg
ctgaaatctaccgttgtacaggaaactgattcttctgcacctaaagtgccaaagatagac
agtcactgcacatctgctgttatgagctcatctaaaaatggagaaatagaaactgtaaat
ccagctacaaatcatccagctgaaaccattcaggaaagtctgctattggattgctctgca
tcggggactggtggcaggtcatgtaatcagcagccactagatctctccagtgctgtcggt
aagagagacagtgaggtcttagctgactgtgttctggatctgagcatgagcagaaagagt
acagagtctgactcaactgcatgtttagccttccagacatcagttaggaggactaaaccc
aactcaagcatgttggagaaagtattgctaagccagtatgctgtagtggatgttcctaca
ccagcacatgaaactatcaatgctcctttagaaacagatctagcagcaatggctgtgtct
gagccaattcctgctaaccctgaaagtgttatgtctgagctgcctccaccctctcctcct
gcactggatgcaaccccttctctgccaaattctgctgcactgcatactgcctctccagcc
cagcccctttcagctacttcagagcccacagagatattactaccagcgcaaacatccata
accaatcaagaggttcaacctatctgctccactgctcagtcctccagtactgtagcgctc
aacactcctgtggagctctctgtcggaaattcgttggcagcttttaatgtgtctcttcct
aattggcttaattccgcccctggaagtgtgacccatgcgctcatccccacaaccccagct
ctaagcttacaaggtcctcagtatcttacagatacatctgtgtgtgaactagcacaaagg
accttggtgattgattctgtcttgtcacctgaaacacatctaatttctcctgtgttggtg
aaccagtcaaacatcagttccctgagtttttctccaaatgtggttgttattgagtatact
gttgcactggagtcctctaatcccacccctgttccccaagctaatgctgttcactcgctc
tttgataaaacaccaccagatcacactgaagcacaagaactccagccttcatctcaacta
caggctgccaacatcgagccatcagtttcagaactgccagaggctggcattgttgaggct
caagatcaagtattggacacatcctctaatggagaatcattagagaattcagtagcagca
gtactgccgtcacttggtcccagtgtttcagagaaagtagagacaacagtggagcctgca
gaaaattcatcctctactgataatctcaaagtggaaagctcagacattaccatacagcag
aatcctatgagtgaggagcaattgcccttgcctcctctatgcaagcgctttatgtgtaat
gcctgtgatgagctcttccattccatgaagggtctgagtcagcatattggtgaacactca
ggcacttggccatataagtgtgaattttgtgtccagctatttgagagtgacactggttta
tttgagcaccgatccagttaccatggcattggtaaaatctatgtctgcagaatatgctcc
aaagagtttgcttttctttgcaacctagaacaacatcatcgagatctccatcctgggcag
gagtgctcacatactgaagtagaaaatggtaagttaagacctgaaaaccataattgtcca
gtaagagctgatacttttactaaagcgtgtcttagaaaagacaaacttagccaatcctac
caaacaattccaaaaccagaggctgacaataactctgaaaacactactgaggagttatac
actaccatcaagattatggcatctgaaggtgtcaaacccaaaggtacagatgtgcggctt
ggcattaaccagcattacccaagttttaagccacctccatttccataccacaaccgaaca
ccagttggaccagtcaccaccacagccactaacttcacaactcataatatcccacagact
ttcagcactacagttcgctgcaccaagtgtggcaggggctttgacaacatgcccgaacta
cacaagcacatattagcctgtgctaatgctagcgacaaaaaacgctacactccgaaaaag
aaccccattccactcaagcaatttgcaaaagtgcaaaatggagttctgttgcctgctaga
ggagtcaaccttagacagaatatctctcaaaagcttggacaaccaaaaaagctccatttc
catgaggcagaagctaagacaaagctgagcgctcatagtaagaggaaatctatgtgggta
caaagagggaggccagtagggcgaaagagttcacaggaggagctggtggtttatgtttgt
cctcattgtagtagggagttcacttaccatgccagcctgaagaaacatatggctttcagc
tgcccaatgaaaccgatttgcaggaaacctccaaaaagaaaaggtagcatcgcaccaacg
caggaaaaccatggacgtatccgcacacgtgtatcagatgtaataatgaaaccacaaagg
ttaaatcaaggacagaaatccttagcaaaaacacagaccaatgagactggttcagccagc
aatgtgaatctaccagtcaaggctcaaattggcaaagggaaaattactgtgcgcaattat
aggcctaaaacatcttatattctctcaggctcggcagttcacataagtaaaaaaaataga
ctcattctgatggaagccactcagtcaccattggcatcaaaatctttagtagcaacaggg
aaatctcagctgcagagcaatggggtacatggtatggagaggaaaataaagcaaagagat
gtggagttgaagcccagcacagaggagcagttctctctgcgagtgagaggtcccgttacc
cgcagtctgcagcaggttacatctaatgtcacatctaatactaacaaaaaggctaactca
actaatccagccaaatgcttagtccagacagatgatcagaatgtcgctgaacatcaagca
gttgcagagtcaaagaaataa
DBGET
integrated database retrieval system