Ictalurus furcatus (blue catfish): 128608291
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Entry
128608291 CDS
T09387
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04010
MAPK signaling pathway
ifu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128608291
04020 Calcium signaling pathway
128608291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128608291
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128608291
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128608291
NCBI-ProteinID:
XP_053481902
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Position
5:33043606..33148625
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AA seq
1362 aa
AA seq
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MLEVSDMLAVPVLCQDTESWHKHRGALLDPLLLHTGSCDALCPTQEGGPGAMEGQPGVST
TIFTRRRGGLIEQKDIVKAHQAHKIQSTPQARRKEWEMARFGDAVPPGHGVLDGGSERSR
TREPPSSSTGGVSPVFKQTKAQRARTMALYNPIPVRQNCFTQNRSLFIFSEDNVVRKYAK
RIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGXKI
VALGFVFHKGXYLRNGWNVMDFIVVLSGILATAEAHMNIPVDLRTLRAVRVLRPLKLVSG
IPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGRLHKTCIPDPDIQENETV
PDWEAEFPCGDRRCPYKYSCNGLWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNA
NDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIER
ELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDSIHHGPEEQCVDIASV
GGPLNRASIRSVKRGPAAYFRRKERMLRISVRRMVKTHTFYWTVLGLVALNTICVAIVHH
NQPEWLSTFLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDFGVIVGSIFEVIWS
FFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFA
LLGMQLFGGRFIFEEFTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWS
SIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEAEEEAFNQKHALQKAKEVGPMS
SFISSERRRRPYLYRKRALIHRGRTAFSLEESDSFGDAPPLNPSRSFMSRRERRRRLTMS
VWEQRTSQLRRHRQTSSREILYGSSVCHHRKLAHSTEIPPSPEISSALDPLESLEPSMEE
QTVSVGPLPDPPESENSNAKDLYGNPAHAHTQISTTLELLDPLDAVKDEQDVDNAQLPGN
APEEFQDKNHLSVRRANGERRQRGTRKYSKYGKHSKHRNPETHHRRHDEPNADERSRSAS
RERTTGNDGEEAEEEKSNDGGGSPEERTAEDRFGCQDQSTDTSATPRERDSKALHVDVGV
SLSPYMEVFKIAHVFSDISSYLLVLAADSEPATLQIADSSTPECVVPGKATTEGENNNNQ
DKTSLSTNVVIEDMDTTPGLELSTITTNNKDLEASKSEKEDEQAANRSRTPPDSMFIFKP
HNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVATNSDXNKVLRYFDYVFTGXFT
FEMIIKVSDSGLILHDGSYFRDLWNILDFIVVVGALVAFALT
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagtcagcgacatgctcgcagtgccagtgttgtgccaggacacagagagttgg
cacaaacacagaggggcactgcttgaccctctcttacttcacacgggcagttgtgatgcc
ctctgccccacacaggaaggggggccgggagcgatggaggggcagccaggggtcagcacc
accatcttcacccgaaggagaggaggacttatcgagcaaaaggacattgttaaagctcat
caggcccacaagatacagagcacaccacaggcacgacgcaaagaatgggaaatggctcgg
ttcggggacgcggtgccgccgggccacggtgtgctggacggcgggtcggagcgcagccgg
actcgcgagcctccttcatcctccaccgggggagtttctccggtgttcaagcagaccaaa
gcgcagcgcgcgcgcaccatggccctgtacaaccccatcccggtccgacagaactgcttc
acccagaaccggtccctcttcatcttcagcgaggacaacgtggtgcggaagtacgccaag
aggatcatagagtggccgccgttcgagtacatgatcttagccaccatcatcgcaaactgc
atcgtcttggctctggagcagcatttacctggagaggacaagacgcctatgtcaaagaga
ctggagaaaaccgagccgtacttcatcgggatgttctgtttcgaggcggggnataagatc
gtcgcgctgggattcgtgttccataagggtncgtacctgaggaacggctggaacgtcatg
gacttcatcgtggtgctcagcgggatcctggccactgccgaagctcatatgaatatcccg
gttgatctgaggacgttgcgagctgttcgagttctgcggcccctcaaactggtgtcagga
atcccaagtctgcagatcgttttgaagtccatcatgaaggcgatggttcctctgctgcag
atcggcttgttgttattttttgccattttaatgttcgcaatcatcggcctggagttctac
agcggccgcctacacaagacctgcatccccgatccagatatacaggagaacgagacggtt
ccggattgggaggcggagttcccgtgtggagatcgtcggtgtccgtataaatacagctgt
aacgggttgtggatcgggccgaacgacggaatcacgcagttcgacaacatcctgttcgcc
gtgctcaccgtcttccagtgtatcaccatggagggctggaccaccgtcctgtacaacgcc
aatgatgcattaggtcccacgtggaactggctgtacttcatccccctcatcatcatcggc
tccttcttcgtgctcaacctggtgctgggagttctgtctggagagtttgctaaggagaga
gagcgtgtggagaacaggagagcttttatgaagctcagacgtcagcagcagatcgaaaga
gaactgaatggatatcgagcttggattgaccgagcagaggaagtgatgctggcggaggag
aataagaactcgggtccttcagctctggacgtgttaaagagagccaccacgataaagagg
aggggcgtggactccatccatcacggtcctgaagagcagtgtgtggacatcgcttctgtc
ggtgggccgctgaaccgggcgagtatccgcagcgttaagcgagggccggccgcgtatttc
cggaggaaagagaggatgctgcgtatctccgtccgccgcatggtgaagacacacaccttc
tactggaccgtgctgggactcgtggccttaaacaccatctgcgtggccatcgttcatcac
aaccaacccgagtggctctccaccttcctctattacgcagagttcctgttcctgggtttg
tttctgacggagatgttcctgaagatgtacggtctcggccctcggctctacttccactcc
tcctttaactgcttcgacttcggagtgatcgtcggcagtatctttgaggtgatctggagt
ttcttcagacccggaatgagtttcgggatcagcgtcctgcgcgcgctccgactgctgagg
atcttcaaaattaccaagtactgggcgtctctgaggaacctggtcgtgtctttgatgaac
tccatgaagtccatcatcagtttgctcttcctcctcttcctcttcatcgtggtttttgcg
ctgctgggcatgcagctgttcgggggaaggttcatctttgaagaattcacccccactaac
tttgatacgtttccggctgccatcatgaccgtgtttcagatccttacaggtgaggactgg
aacgaagtgatgtacaacgggattcgctctcagggcggagttaagtcgggaatgtggtct
tccatttacttcatcgtcctcacgctgtttggaaactacacacttctcaacgtcttcttg
gctatcgccgtggacaatttagccaacgctcaggagctcaccaaggatgaagaggcggaa
gaggaagcgtttaaccagaaacacgcgctgcagaaagcgaaagaggtcggcccgatgtcg
tccttcatctcctcagagcggaggagacggccgtatctgtacaggaagcgcgcgctgatc
caccgcggccgcacggctttctctctggaggagtcggacagtttcggcgacgctcctcca
ctcaatccctctcgctctttcatgtccaggagagaaagacgccggcgtctgaccatgtcc
gtgtgggagcagaggaccagccagctccggcgccatcgccaaacctccagccgagaaatc
ctctacggttcgtctgtgtgccaccatcggaaactggcgcactccaccgagatccctccc
tcgccggagatcagttccgctctcgaccctctggagtctctcgagccgtccatggaggag
cagaccgtctccgtgggtccgctgccggatcctcctgaatccgaaaactccaacgccaaa
gatctgtacggaaaccccgcgcacgctcacacacagatcagcaccactctggagcttctg
gatcctctggacgcggtgaaagacgagcaggacgtcgataacgcccagttacccggaaac
gcccccgaggaatttcaggataaaaaccacctgagcgtccggagagccaacggagagcgg
cggcagcgagggacgcgtaaatacagcaaatacggtaaacacagcaaacacagaaaccca
gaaacgcaccatcggcggcacgacgagccgaacgcagacgagcgcagccgctccgccagc
cgagaacggacgacgggaaacgacggtgaggaagcggaggaggagaagagcaatgacgga
ggtggcagtccagaggaaaggaccgctgaggacagatttggatgccaggaccagagcacg
gacacgagcgcaactccgcgtgagcgcgactcgaaggctttacatgtcgatgtgggcgtg
tctttgagtccatatatggaagtcttcaagattgcgcatgtattttcagacatttctagc
tacttgctagttctggccgcggactcggagccggccacgctccagatcgccgacagcagc
acgccggagtgtgtagtacccggtaaggccactaccgagggagaaaacaacaacaaccag
gacaaaacgtctctcagcaccaacgtggtgattgaagacatggacaccacaccaggactg
gagctctccaccattacaacaaacaataaagatctggaggcttcgaaatctgagaaggaa
gacgagcaagcagcaaatcgctcgagaactcccccagacagcatgttcatcttcaaaccc
cacaatccgatccgcagggcgtgtcattatgtcgttaatcttcgttattttgaaatgtgt
atcctgttggtcatcgctgcgagcagtatcgctctggcggctgaagatccagtggccaca
aactcagacntgaataaagtgctgcgttactttgattatgtgttcactggangtttcacg
tttgaaatgatcattaaggtgagtgacagcggcctgatccttcatgatggctcttatttc
cgtgatctgtggaacattctggatttcattgtggtggttggagcactggtagcattcgct
ctcacgtga
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