KEGG   Ictalurus furcatus (blue catfish): 128608428
Entry
128608428         CDS       T09387                                 
Symbol
itgav
Name
(RefSeq) integrin alpha-V
  KO
K06487  integrin alpha V
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04081  Hormone signaling
ifu04145  Phagosome
ifu04148  Efferocytosis
ifu04510  Focal adhesion
ifu04512  ECM-receptor interaction
ifu04514  Cell adhesion molecules
ifu04810  Regulation of actin cytoskeleton
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    128608428 (itgav)
   04512 ECM-receptor interaction
    128608428 (itgav)
   04514 Cell adhesion molecules
    128608428 (itgav)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128608428 (itgav)
   04148 Efferocytosis
    128608428 (itgav)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128608428 (itgav)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128608428 (itgav)
   04810 Regulation of actin cytoskeleton
    128608428 (itgav)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ifu04131]
    128608428 (itgav)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128608428 (itgav)
   04515 Cell adhesion molecules [BR:ifu04515]
    128608428 (itgav)
   04090 CD molecules [BR:ifu04090]
    128608428 (itgav)
Membrane trafficking [BR:ifu04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    128608428 (itgav)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128608428 (itgav)
  Exosomal proteins of epithelial cells
   128608428 (itgav)
Cell adhesion molecules [BR:ifu04515]
 Integrins
  Integrin alpha subunits
   128608428 (itgav)
CD molecules [BR:ifu04090]
 Proteins
  128608428 (itgav)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 128608428
NCBI-ProteinID: XP_053482074
LinkDB
Position
6:413147..442301
AA seq 1043 aa
MGKQLIYYLYFTLSLFSVFPVTPFNLDTEKPSVFSGPQGSYFGFSVDFFSPTDKLQNILV
GAPKANTSSSSSVRERGAVYSCPWQSGGTCMQIEFDNSDNRVENGQQMEFKSSQWFGATV
RSDGEHILACAPLYQWSTYGFKEREPVGTCFLKKGSTVVEYSPCRSGSATPEGQGFCQAG
FSADIVKNKRVVVGGPGSFYWQGQLISDDISEVLSRFTKELTTKYSNQMATKSASAQYDD
SYLGYSVAVGDFNDDGVDDYVTGVPRGEKALGYVNIFNGKNMASAVNFTGLQMAAYFGNA
VAATDINNDGRMDLLVGAPLFMERGSDGKLREVGQVYVYLSSGGFSFQPPLKLTGSEIYS
RFGSSVSNLGDLDRDGFNDVAVSAPYGGSSRQGLVYIYNGRAGGPDSQPSQILEGKWASA
SLPPSFGYAMHGAMDIDQNGYPDLVVGVFGADKAILYRARPVISVNSTLDITPQILSLED
KRCALPGTTAMVSCFMVKYCLKASGKGAPSILKFQVDLTLDRLKQKGAIKRVLFLHNRLS
QYTKFMSVTNGGVQSCEELQAYLIDESEFRDKITPISIFMEFSLDYVSAADKTGLQPILD
QSKPANITKQAHILLDCGDDNICKPDLRLDVVSDQKQIYIGDDNPLTLEVTAENRGEGAY
EAELSIIIPPQADFIRGVRNSETSSRLSCAYKRENQTRVVCDLGNPMKGGTKIVAGLRFS
VHQLSEQDTSVKFDLQILSSNQYNSSSNLVTVVTKLAVLAKVEIRGASAPEQVFLPIANW
QPKENPVVEDDIGPLVQHIYELRNKGPSAFSKAMLDVEWPYRYNNGSLLYITKYEVDGAM
NCSTDIEINPLNVTNPMYWNKNTTVSGGDRTEGRARSHVHRRDLQDQRAEEDMLTLDCEK
AQCLKIKCQVGRLERGQSAILYIYSRLAVSTFLQADVQNHSYVVKSSAAFSVIEMPYKNL
DFELPVNSTSASLSVVWVNSELTQPAPIWVVVVAVLAGLLLLALLIFIMYKLGFFKRVRP
PQEDGTEKEQLQPQENGDKSTET
NT seq 3132 nt   +upstreamnt  +downstreamnt
atggggaaacagctgatttattatctttatttcactttgtcacttttctccgtttttcct
gtgactccctttaacctggataccgagaagccctcggttttctccggacctcagggcagc
tacttcggcttctctgtggatttcttcagtcccactgataaactgcagaacatcctggtg
ggcgctcctaaagccaacacctcctcttcttcctcggtgagggagcgaggcgccgtgtac
agctgtccatggcagtcaggtgggacgtgtatgcagatagagttcgacaactccgataac
cgtgtggagaacgggcagcagatggagtttaagtcgagtcagtggtttggagctacagtg
cgttcagacggagaacacatcctggcgtgtgcaccgctgtaccagtggagtacgtacggc
tttaaggaacgtgaacctgtcgggacgtgttttctgaagaaaggctccacagtggtggaa
tattctccctgtcgctctggttcagccactcctgaaggacagggcttttgccaggcaggc
ttcagcgctgatatcgtgaagaataagcgtgtggtggttggaggtccggggagtttttac
tggcaggggcagctgatctcagacgatatctcggaggttctcagcaggttcactaaagaa
ttaaccaccaaatacagcaaccagatggccaccaaatccgccagcgcgcagtacgacgac
agctacctcggttactctgtggcagtcggagattttaacgacgatggtgtggatgattac
gtcaccggcgttccgagaggagagaaagctctgggatacgtgaacatctttaatgggaag
aacatggcctccgcagtgaacttcaccggcctgcagatggcagcgtatttcggaaacgca
gtcgctgcaacagacatcaacaatgacgggaggatggacctgttggttggagctcctctg
tttatggagcgtgggtctgatgggaagctgcgtgaggtgggacaggtgtacgtttacctg
tcgagcggcggcttctccttccagcctcctctcaaactcaccggctctgagatctactct
cgcttcggcagctccgtctccaacctgggggacctggaccgggacggcttcaacgatgtg
gcggtgtcggctccgtacggaggttcctctcggcagggtttggtgtatatctataacggg
cgagcgggtgggccggactctcagccctctcagatcctggaaggaaagtgggcgtcggcc
tcactgcctcccagcttcggatatgccatgcacggagccatggacatcgaccagaacggc
taccccgatctggtggtgggcgtgtttggagctgacaaagccattctttacagggctcgg
ccagtgatcagtgtgaactccaccctggatattaccccacagatcctgagtctggaggat
aaacgctgcgcgctccctggaacaaccgccatggtgtcatgtttcatggtgaaatactgt
ctgaaggccagtggaaaaggagctccttctattctgaagttccaggtggacctgactctg
gaccggctgaagcagaagggagcgataaagcgtgtgttgtttctacacaaccgtctgtct
cagtacaccaaattcatgagcgtcactaacggaggagtgcagtcctgtgaggagctgcag
gcttatctcatagatgagtcagagttcagggataagatcactcccatctccatcttcatg
gagttcagtctggattacgtgagtgcagcagataaaacgggtctgcagcccatcctggac
cagtccaaaccagcgaacatcaccaaacaggcccacatactgttggactgtggtgacgat
aatatatgtaaaccagatctgagactggatgttgtcagtgatcagaagcagatctatatc
ggagatgataatcctctgactctggaagtgacggcagagaatcgtggtgagggagcgtac
gaggccgagctcagcatcatcatcccacctcaggctgacttcatacgtggagtgagaaac
agtgagacgtcatcacggctctcctgtgcgtataaaagggaaaatcagaccagagtggtg
tgtgatctgggaaaccccatgaaaggaggaactaagatcgtggctggtttgcgctttagt
gttcatcagttgtcagagcaggacacatcagtgaagttcgacctgcagatactgagctcc
aatcagtataacagcagcagtaacctggttaccgtagtaacgaagctggctgtgctcgct
aaagtggagattcgaggtgcatctgccccagagcaggtgttcctgcccatcgctaactgg
cagcccaaagagaaccctgtggtggaggacgacatcggcccactagtgcagcacatctac
gagttgaggaataaaggtccgagtgcgttctcgaaggccatgctggacgtggagtggccg
tatcgctacaacaacggctctctgctctacatcaccaagtacgaggtggacggagccatg
aactgcagcaccgacatcgagatcaaccccctcaacgtcacgaaccccatgtactggaat
aagaacacgaccgtttccgggggcgaccggaccgaggggcgtgcacggagccacgttcac
cggcgagacctgcaggaccagagggctgaggaagacatgctcacgctggactgtgagaag
gctcagtgcttgaagattaagtgtcaggttggccgcttggagcgaggtcagagtgcaatc
ctctacatctactccagactggctgtgtccaccttcctgcaggccgatgttcagaaccac
tcgtacgtggtgaagtcgtcagctgccttcagcgtcattgagatgccgtacaaaaacctg
gattttgagctgccagttaacagcacgtctgcgagcctcagcgtggtatgggtgaactct
gagctgacccagcctgcccccatctgggtggtggtggtagccgtattagccggtctgctg
ctgctagcactgctaatcttcatcatgtacaagctgggcttctttaagcgagtacgcccc
ccacaggaggatgggacagagaaggagcagctccagcctcaggagaacggagacaagagc
actgagacctga

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