Ictalurus furcatus (blue catfish): 128608441
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Entry
128608441 CDS
T09387
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128608441 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128608441 (spopla)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128608441 (spopla)
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
CR_prot_dom_plant
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
128608441
NCBI-ProteinID:
XP_053482112
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Position
6:1358906..1373783
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AA seq
401 aa
AA seq
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MSRVLTPPPPPPPPPPPSQGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEV
LKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKR
EETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNIS
GQSNTNVLKVPECQLSDDLGNLWECSRFTDCTLCVGGQEFKAHKSILAARSPVFNAMFEH
EMEESKKNWVDISDVEPDVFREMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEE
SLCSSLCVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKYWNSNHAADIM
ETPGWKAMIQSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgtccttactcctcctcctccccctcctcctcctcctcctccttctcaggga
gagatgagcagcggccctgtggccgagagctggtgctacacacaggtaaaagtagtgaaa
ttttcctacatgtggaccattaacaacttcagcttctgtcgagaggagatgggtgaagta
ctgaaaagctccaccttctcttcaggtcccagtgataaaatgaaatggtgcctcagagta
aacccaaaaggactcgatgatgaaagcaaagactacctgtcactgtatcttctcctggtt
agctgtcccaaaagtgaagtgcgtgcgaagtttaagttttctttactcaacgctaagcga
gaggagactaaagctatggaaagccaaagagcctaccgatttgtccaaggcaaagactgg
ggcttcaaaaagtttattagaagagattttcttctcgacgaagcgaacggccttcttcca
gacgacaagctcactctgttctgtgaggtgagtgtagtgcaggactctgtaaatatctca
ggtcaatctaacacaaatgtgctgaaagttcctgagtgccaactctcagatgatctggga
aatctgtgggagtgttcacgcttcactgactgcacactgtgtgtgggggggcaggagttc
aaagcccacaaatccattctggcagcgagatcaccggtttttaacgccatgtttgagcat
gagatggaggagagcaagaagaactgggtggacatcagcgacgtcgagccagatgtcttt
agagaaatgatggggtttatatacacggggaaagcaccaaatctggagaaaatggccgac
agtttgttggcagcggctgataaatacgctctggagcgtttaaaggtgatgtgcgaggag
tctctgtgcagcagcctgtgtgtggagaacgtagccgacacgctcatcctcgccgacctg
cacagcgccgagcagctcaaagctcaagccatcgattttatcaataggtgcagcgtcctc
cgacagctggggtgcaaggatggaaaatactggaatagcaaccacgccgcagacataatg
gagactccgggctggaaggcaatgatccagtctcatccacacttagtggccgaggctttc
cgcgctctggcttcggctcagtgccctccgttcggcctgcccaggaagaggctcaagcag
tcctga
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