Ictalurus furcatus (blue catfish): 128608480
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Entry
128608480 CDS
T09387
Name
(RefSeq) glucosylceramide transporter ABCA12-like
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128608480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128608480
Transporters [BR:
ifu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128608480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_30
AAA_15
DUF4162
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
128608480
NCBI-ProteinID:
XP_053482190
LinkDB
All DBs
Position
6:2124237..2181645
Genome browser
AA seq
3119 aa
AA seq
DB search
MLNCTAVGDLWEQVAEAANLNSSVFTVWCNNRLVPLLDMYHTSDYQPAVHNITGTDPQWV
DAIVAEIVGSLEAFYSASLNESLSMQHLSQGLVEHFNLSLSAEGNLSDWSGLLSQLQSQS
FAQMALESATLQLNKLDWNPYVLAVQKAIEYTRGSQNVTASPEMVIHALDVALTAMNFSS
EQIERFLSSDILTMPNSLSTDMLIMEVMSKIIDMRLLGNWPLVYDVMEQLLYVENTSNIL
RAVSELVSWYNTTEDTGVYFGIEMLAKLYEMLTPLVPASSPLPCYSDLFIGLAGNALYAL
QHIAGTTNLLTPINDYLKPIQMKLALGDNLRDLLSATQNARRPVLNLTREPVDDFLDLLE
INYQTLSQILSIPLSSQEMLETMHVFFANPDLGIFLKGVSRDMTGSSFEDETIDTILGTL
ASLTLPSNGQTFIEMITQTISQAWSLNDMQLVESLGGMVGMVRMLSQQSSLSIAQRIEQM
ANQLNSAASYTVAQQGNRSEILTAINNILSQNLQQMPNTSFEDQSVLQNVISSVSLMSES
QIDFGSYMMLINQTTEAFASLVPPEEMVYFNISARMMEAFALLMSSPTDLEKVVTSSHEI
ADSLGLSFALTGMTTLPNGQSIEDTAYPFILNSVLATEILFNLSASNYTFESDSERSMIL
NQMTSSLPMEVQADLHPLMSALISALSDVSNTAQIRPAFFQISQNATMLLLEYLNLTGDP
TSMRMYSVLSTVSDEVSTSLGEGLMGNSSSVQLPYVLESLRAIISSLSLELPVEEQQYPD
AVFNFMETVALALNHTITTGDGTDGTNMLSSSVQRLLVMMPNNNMDTSSGITSELENTVK
MLLMTLSSGQDPLTKSANTTDEILTTIQYLLAVANSSSEIDLATAIVGAVRMNVGSLLAA
KDNNWAQKLQMVLSSISNILPADLQFGPFNRTIFESLANEPPENLNILLQTASTVSELFS
TNWMNDSFGELLNQMQMQVCSLENMESVQLLSQVLSLSPGMLCDTALPSIHALHVLATNM
VNQTTGVYDLLYQHLVGDPSTYDLKVNWTAILSDLLGIDINSLPGFDINQTAPSELKVSD
LLNNKALFVSDVTRYTSIPPQVLNTLLESSLPQSNLQILSQLANLQRCADLSSLQLDPAS
SLIFSSLCSLPVQEWYSLAVLSAQHVNMDNVMYKLMLSSEIQGLFNALVRMLEFFMDMMS
KLSPTLNRLQGYFTSIKDMNLMSNSEFRNLVRGKRSTISSRATFNTISRALCQNGMMSLF
GISQLPSMSESNPSLQDQQTVEDLMTKFKIPKDATPFCKNFYLDMVSTTGGAVAWAFLKP
MLLGQVLYYPDTPLTQTIIKQSNSTLQQFGDLRVYADEWIRSSSYLAQSVQLLNKTLPML
KNSLSNPFIQNFIKKQIDIDIAQMEETLNAFANMTQMLENNKFILQQITTLSNLMMNLSS
CVNFDRYRAFNSIQDLEKQAEKLGQNRELYASVIFKLPTGQNSSSTLPPKVDYTIRMHID
NSMRTDRTRNPFWVRAAYISPVLTQRYNRGFIYLQESIERAIIGMQTGNAVQEPPVQIQA
FPYPCFYKDDYLNSIAFAFPLVLMISWVLFVANFVKKLVHERELRLHEYMKMMGVNPFSH
FLAWFMESAAFLLVTVIILTVILKSGGVLPKSDGFVVFLYLCDYALSILAISFLVSSFFD
KTNIAGLSGSLIYVICFFPFIVVMCLEDTLSFFAKGMLSLFSPTCFSYASQYITRYEKQE
EGIQWNNMYLSPVAGDTGSFGSLCWLLLVDSVIYFLLGAYIRTVFPGKYGIAARWYFPVT
PSFWADVFGCNRRKQKKAGRGLLFSNMMQESQGNGKDKSKGTSDLHPHGDDEFPELPVGV
SLRGLTKTYGDRKAIDNLNLMFYEGHVTALLGHNGAGKTTTMSLLTGLFAPSSGSIEVYG
KDLQMFSKDVRKELGVCMQYDVHFDHLTTEEHLLLYGHIKAPHWSKQELQEQVRKTLEET
GMYAHRHKRVGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWDIVLKHKS
DRTIILSTHHLDEAEVLSDRIAFLERGGLKCCGSPLYLKDKLARGYKLTLTKKVLPPDSD
DKFDIETVKSFVHSHMPEAQLKKGEVGDIVYSLPVYSSHNASAYRSLLSGLDHNLEALQL
GCYGISDTTLEEVFLQLTKDCAAREDVEDRPYTVSNSELDTGASQDSLSDDLNSSMHFGE
RASLTGNSTVSGLALKGQQVMAMLIKRLHHTRRNWKGLISQVLLPVLFVLAAMGLGSIKS
DLWYFPELELTPAMYDSGKQYAFFSNQNSSSSYLVDSMMSYPGIHHYCMDKPDSAACRKK
DASVSDQWTSGGNPTSVFEICECGNFSQTCPESGYEPPHKTNPSSQIVYNLSDIDVESYL
LATANDFIRNRYGGWSFGNPLPNSLQMDILEVPKNRTLTKVWYNPEGHHTMPAYLNSLNN
FILRAKIPASKQPQQYAISVSSHPYPGQVEEEDAIVRNLVNLLVAMCVLTGFSIMTASFV
IYEVQEHHTGSKRLQHISGISEPFYWTVNFFYDMALYMIPVILSIITIAAFQLPAFTDRL
NLGAVSLLLILFGFASFPWMYLVSTVFKDAEMAFICYVCINLFISMNTIISTAIVYFLGQ
TKHDVENIQAVYHTLSNVFLVFPQFSFGNGLMELARVDLQVQILSTYGVDAYKNPFSMDV
LGGMFISLFLQGFICFTLRLLMNKWLLRKVRRLWTRRPWVPQTGSRGEDVDKDVLAERQR
VDSGVAGSDLLQVSQLTKIYQHLNHRVQAVTNLSFGIPAGECFGLLGVNGAGKTTTFKML
TGDISPTRGSAQVLDRDGRTVDIMDCRTEGINIGYCPQVDALDDLLTGEEHLYFYARIRG
ICKREIDQVVNYLLKKLELNYHRHIISERYSCGTRRKLSTALALIGQPQILLLDEPSSGM
DPRSKRHLWKIISDEVMGKCAVILTSHSMEECEALCTRLAIMVQGQFRCLGSLQHIKNRF
GSGFTVKMYLTSSSCDVDAITTFMQEHFPSTYLKDHHSSMVVYHVPVAPGGVADIFDQLE
SNKAALQIKHFSVSQTTLDEVFINFAMGTVGRDARGDGEASDVDSPDGEMQRNETSRLE
NT seq
9360 nt
NT seq
+upstream
nt +downstream
nt
atgctgaattgcacagcagtgggtgatctctgggaacaggtcgctgaggcagcaaatctg
aacagcagtgtgtttacagtctggtgcaacaatcgtctcgttccactactcgacatgtac
cacacctccgattatcagccagcagtccacaatataacaggtacggatcctcagtgggtg
gatgccatagttgcggagattgtgggctctctggaggcgttttactcagccagtcttaat
gagtctctgagcatgcagcatctgtcacaaggcctggtggagcacttcaacctgtctctc
tcagcagagggaaatctatctgactggagcggcctgctctcgcagctacagagtcaatcc
tttgctcaaatggccttggagagtgctacgctgcagctgaataaattagactggaatcca
tacgtcctagcagtgcagaaagccatcgaatacacccgggggagtcagaatgtaacggcg
agccctgagatggtcatacacgccctggacgtggcgctcactgcaatgaacttcagtagc
gaacaaatagaacgtttcctgagtagtgacatattgaccatgcctaatagcttgtccact
gacatgctcataatggaggtgatgagtaaaatcattgatatgagactgcttggaaactgg
cccttagtgtatgacgtaatggagcaactgctatatgtagagaacaccagcaacatcttg
agggcggtgagtgaactggtcagctggtacaacactactgaagacactggagtgtatttt
ggcatagagatgctcgccaagttgtacgagatgctaacaccattagtgccagcttcaagc
ccgctaccatgctactccgacctctttattgggcttgccggcaatgctttgtatgcactg
caacatattgctggcaccaccaacctgctcacccccatcaatgactatctcaagccaatc
caaatgaaacttgctctgggagacaatctaagagatcttctgtcagcgacccaaaacgcc
agaagaccggtgctaaatctaacaagagaaccagtggatgactttctcgacctcctggag
atcaactaccaaactttatctcagattctttccatcccactcagctctcaggaaatgttg
gagaccatgcatgttttctttgcaaacccagacctgggcatcttcctcaagggtgtatcc
agggacatgacaggaagctcgtttgaagacgaaactattgacacaatcctcggtacacta
gcctctttgacacttccgagcaatgggcaaacgtttatagagatgatcacacagaccatc
agtcaagcctggagtctgaatgatatgcagctggtagaaagcttgggtggaatggttgga
atggtgaggatgctttcccagcagtcatctttgagtatagctcagaggatcgaacagatg
gctaatcagctcaattctgcagcatcgtataccgtggcgcagcaaggtaatcgtagtgaa
atcctcacagccatcaacaatattctgtcacaaaatctgcagcagatgccaaacaccagc
tttgaggaccaatccgtccttcaaaacgtaatcagctctgtatccttaatgtccgagtca
cagatcgactttggatcctacatgatgctgataaaccaaactaccgaagcctttgcctcc
cttgtgcctcctgaggaaatggtgtatttcaacatttcagcacggatgatggaagctttc
gcattgctcatgtcgtctccaacagatctagagaaagtggtgacgtcaagtcacgagatt
gctgattcactgggcctcagttttgcccttacgggtatgaccactcttccaaatggtcag
tccattgaggacactgcataccctttcattctaaacagtgtcttggcaactgaaatcttg
ttcaatctctccgcttcaaactacacctttgaaagtgattcagaacgtagcatgattttg
aaccagatgacgtcaagtctcccaatggaagtgcaagctgacctccatcctctcatgtct
gctctcatttcagctctttcagatgtctcaaacacagcccaaatcagaccagctttcttt
cagatctcccagaacgcgaccatgttacttctggaatacctaaatctaacaggagatccc
acgtccatgagaatgtattctgtcctgtccactgtttcagatgaggtatccactagtctc
ggtgagggcctaatgggaaattcttcctccgtccagctcccatacgtgctcgagtcttta
cgagcaatcatatcttcactgtcattagaactacctgtggaggaacagcaataccctgat
gccgttttcaacttcatggagactgtggccttggctctgaaccacactatcaccacaggg
gacggaacagatggaacgaatatgctttccagctctgtccagcgcctcctggtgatgatg
ccaaacaacaacatggatacgtcaagtggcattacgagtgaactggaaaatactgtcaag
atgctgctgatgactctgtcgtcaggtcaagaccctctaactaagagcgctaacacgacc
gacgagatcctgaccaccattcagtatctgcttgccgtggctaacagcagctctgagata
gatctagcgactgcgatcgtgggggccgtcaggatgaacgtcgggtctctgctggcggca
aaagacaataactgggctcagaaattgcaaatggtgctgtcatccatctccaacatcctt
ccagctgaccttcaattcggtccgttcaacagaaccatctttgaaagtttggccaatgag
cccccagaaaatctgaatatccttcttcagacagcaagcacagtttctgaacttttctca
accaactggatgaacgacagctttggagagctactgaaccaaatgcagatgcaggtgtgc
agtttggagaacatggagtctgttcagctgctcagtcaggttctttctctcagtccgggc
atgctgtgtgacacggctctgcccagcatccacgctcttcacgttctcgccaccaacatg
gtgaaccagaccaccggcgtgtacgacctgctctaccagcacttagtcggggaccccagc
acttacgacctcaaagtgaactggaccgccatcctttctgacctgctcggcatcgacatc
aactctttgccgggattcgacatcaaccagaccgccccaagtgaactgaaggtgtctgac
cttttaaacaacaaggccctgtttgtatctgatgtcacccggtacaccagcattcctcct
caagtcctaaacactctgctggagtcgtccctgccccagagcaacctgcagatcttgtct
cagctggcgaatctgcagcgctgtgcggatctctcgtccctgcagctcgacccggcgtcg
tcgctgatcttcagttctctctgctcgctgccggttcaggagtggtacagcctggcggtc
ctctcagctcagcacgtcaacatggacaacgtcatgtacaagctgatgctgtccagtgaa
atccagggtctgtttaacgccctcgtgcggatgttggagttcttcatggacatgatgagt
aagctgtctcccactctcaaccggctgcaggggtatttcacctccatcaaagacatgaac
ctgatgtccaactcggagttcagaaatttggtgagagggaaacgctcgaccatctccagc
agggctacgttcaacaccatctcccgagccctgtgtcaaaacggcatgatgtcgctcttc
ggaatctcgcagcttcccagcatgagtgaaagtaatccgtctctccaggaccagcaaaca
gtggaggatctcatgaccaagttcaaaatcccaaaagatgccactccattctgtaaaaac
ttctacctggacatggtgagcaccacaggtggcgctgtagcctgggccttcctcaagccc
atgctcctgggacaagtgctgtattaccctgacacaccactcacccaaaccatcatcaag
cagtcgaactccacgctgcagcagttcggcgacctgcgcgtctacgccgacgagtggata
cgttcctcgtcctatctcgcgcagtcagtacagctcctgaataaaacactgcccatgctg
aagaattccctgagcaaccctttcatccagaatttcataaagaagcagatcgacatcgac
atcgcacagatggaagaaactctcaacgctttcgcgaacatgactcagatgttggagaac
aacaagttcatcctgcagcagatcaccacgctgtccaacctcatgatgaacctctcgtcc
tgcgtcaacttcgaccgctaccgcgccttcaactccatccaggaccttgagaaacaggct
gagaaactgggccaaaaccgcgaactctacgctagtgtcattttcaagcttcccacagga
cagaactcgtcctctacccttccccctaaagtggactacactatccgcatgcacatcgac
aactccatgagaaccgaccgaacccgcaacccattctgggttagggctgcctacatctct
ccagtcctgacgcagcgctacaaccgtggcttcatctacctgcaggagagcatcgagcgg
gccatcatcggcatgcagaccggaaacgcggtgcaggagccgcccgtgcagatccaggcc
ttcccctacccctgcttctacaaggacgattacctcaacagcatcgccttcgccttcccg
ctcgtcctgatgatcagctgggtgctcttcgtcgctaacttcgtcaagaagctcgtccac
gagagagagctccgtctgcatgagtacatgaagatgatgggcgtgaatccgttcagtcat
ttcctggcctggttcatggagagcgccgcgttcctcttggtcaccgtgatcatcctgacc
gtcatcctgaaatccggcggggttctccccaagagcgacggcttcgttgtcttcctctac
ctgtgcgactacgccctgagcatcctggccatcagcttcctcgtcagctcgttcttcgac
aagaccaacatcgccgggctgagcggcagtctcatctacgtcatctgcttcttccctttc
atcgtggtcatgtgcctggaagacaccctctccttcttcgccaagggcatgctgagcctg
ttttctccaacatgcttcagttacgccagtcagtacatcacccgctacgagaaacaggaa
gaaggtatccagtggaacaacatgtacctttctcccgtggccggagacaccgggtcgttc
gggtcgctctgctggctcctcctcgtcgactcggttatctacttcctgctcggtgcctac
atccgcacggtcttcccagggaagtacggcatcgcggctcggtggtatttccccgtgacg
ccgtcgttctgggccgacgtgttcggctgcaacagaagaaagcagaagaaagcaggcaga
ggactcctcttctccaacatgatgcaggagagccaggggaacggcaaagacaaaagcaaa
ggtacgagtgatttacaccctcacggtgacgacgagttcccggagctgccggttggcgtt
tcgctgcgaggcctcacgaagacctacggcgacaggaaagccatcgataacctgaacctg
atgttctacgagggtcacgtgaccgcactgctcgggcacaacggagctgggaaaaccacc
accatgtccctcctgaccggcttgttcgctccctcctccggttcgatcgaggtttacggg
aaagacttgcagatgttttcgaaggacgtgcgtaaagagctgggagtgtgcatgcagtat
gacgtccacttcgaccacctgaccaccgaggagcacctgctgctgtacggccacatcaaa
gccccccactggagcaagcaggaactgcaggagcaagtgcgcaagactctggaggagact
gggatgtacgctcaccgtcacaagcgggtgggtacgctgtccggtggcatgaagaggaag
ctctccatctccatcgctttcatcggcgggtctcggctggtggtcctggacgagcccacc
accggcgtggacccctgctcacgccgcagcatctgggacatcgtcctcaaacataagagc
gatcgtaccatcatcctctccacccatcacctggacgaagcggaggtcctcagtgaccgc
atcgcgttcctggagcgcggaggcctgaaatgctgcggatccccgttgtacctgaaggac
aagctggcccgcggatacaagctcactctcactaagaaggtcctgcctcctgactcagac
gacaagtttgacattgagacggtgaaatcgttcgtccattctcacatgcccgaggctcag
ctgaagaagggagaggtgggagatatcgtctactctcttcctgtctacagttcccacaat
gcatctgcctaccgctcgctgctcagtggcttggaccacaacctggaggctctacagctg
ggctgctacggcatctccgacaccacgctggaggaggttttcctgcagttgacgaaagat
tgtgcggcgcgagaggacgtggaggatcgcccgtacacggtgtcgaactcagagctggac
acgggcgcttcccaagacagcctgagcgacgacctgaactccagcatgcacttcggagag
agagccagtctcacagggaactccacggtgagtggtttggcgctgaagggtcagcaggtg
atggccatgctcatcaaacgtcttcatcacaccagaaggaactggaagggtctgatctct
caggttctgctcccggtgctgttcgtcctcgccgccatgggcctcggctccatcaagagc
gacctgtggtacttccccgagctggagctaacgcccgccatgtacgactctgggaaacag
tacgccttcttcagtaaccagaactccagctccagttacctggtagactccatgatgtca
tatcctggtatacatcactactgtatggataaacctgacagcgcggcgtgtcggaagaaa
gacgcgtccgtatcggatcagtggacctctggaggaaatcccacatccgtgtttgagatt
tgtgaatgcgggaacttttcacagacgtgtccggagtccggctacgaaccgcctcataag
accaacccctcgtctcaaatcgtctacaacctgagcgacatcgacgtcgagagttacctc
ctggccaccgctaacgacttcatccgaaacaggtatggaggctggtcctttgggaatccc
cttcccaacagtctccaaatggacattttggaggtgcccaagaacaggacgttaacgaag
gtgtggtataaccctgaaggccatcacacgatgccggcctacctcaacagcctcaacaac
ttcatcctgcgcgccaaaatcccagcaagcaagcagccacagcagtatgcaatctccgtg
tccagccacccctaccctggccaagtggaagaagaggatgccatcgttcgcaacttggtc
aacctcctggtggcgatgtgcgtcctcaccgggttctccatcatgacggccagcttcgtc
atctacgaggttcaggagcatcacaccggctctaagaggctgcagcacatatcaggaatc
agcgaacctttctactggaccgtcaacttcttctacgacatggccctgtacatgattcct
gtgattctctccatcatcacgatcgcagcgttccagcttcctgccttcactgacagactc
aacctgggggccgtctcgctgctcctcatactctttggatttgccagcttcccctggatg
tacctggtgtcgaccgtgttcaaagacgcagagatggccttcatctgctacgtgtgcatc
aacctcttcatcagcatgaacaccatcatctccacggccatcgtgtacttcctgggacaa
acgaaacacgacgtggagaacatccaggcggtgtaccacaccctcagcaacgtgttcctg
gtgttccctcagttcagttttgggaacgggttgatggagctggctcgggtggacctgcag
gtccagatcctgagcacgtacggagtggacgcctataagaacccgttcagcatggacgtc
ctgggggggatgttcatctcgctgttcctgcaggggttcatttgcttcactctgcggctg
ctgatgaacaagtggctcctccgcaaagtccggcggttgtggacacgccgaccgtgggtg
cctcagacaggaagtcggggcgaggacgtagacaaggacgtgttggctgagcgtcagcgt
gtggacagcggagtcgccgggtctgacctgctgcaggtcagtcagctcaccaagatctac
caacatctgaaccaccgagtgcaggccgtcaccaacctgtccttcggaataccggcggga
gagtgctttggattgctgggagtcaacggagcaggaaagaccaccacgtttaagatgcta
accggagacatcagtccgacacgcggctcggcacaagtgctcgaccgggacgggaggacg
gtggacatcatggactgcaggacggaggggataaacatcggctactgcccgcaggtggac
gctctggatgacctgctgacgggagaagagcacctgtacttctacgctcgcatcaggggc
atctgtaagagagagatcgatcaggtggtgaactatctcctgaagaaactggagctgaac
taccacaggcacatcatcagcgaacgctacagctgtggaacacgccgtaaactctctaca
gccctggctctgattggacagccacagatcctgctcttggacgagcccagctcaggaatg
gacccgcgctccaaacgccacctctggaagatcatctctgatgaagtgatgggaaaatgc
gccgtgatcctcacatcacacagcatggaggagtgtgaggctctgtgcactcggcttgcc
atcatggttcaaggccagttcagatgtttgggctccttacagcacatcaagaacaggttc
ggcagcggcttcacggtgaagatgtacctgacctcatcatcctgcgacgtggacgccatc
accacgttcatgcaggagcacttccccagcacttacctgaaggaccatcactcgtctatg
gtggtgtaccacgttcctgtagctcccgggggcgtggctgacatttttgaccagctggaa
tccaataaggcggcgctgcagatcaagcacttttccgtcagtcagaccacactggatgag
gtcttcatcaacttcgccatgggaacggtcggccgagacgcacggggcgacggcgaggcc
tccgatgtggacagccctgacggtgaaatgcagcgaaatgaaacatccaggctcgagtaa
DBGET
integrated database retrieval system
