Ictalurus furcatus (blue catfish): 128608717
Help
Entry
128608717 CDS
T09387
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128608717 (lcmt2)
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
128608717 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
128608717 (lcmt2)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128608717 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_6
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
128608717
NCBI-ProteinID:
XP_053482651
LinkDB
All DBs
Position
6:15067524..15076190
Genome browser
AA seq
700 aa
AA seq
DB search
MLTNFRRVEPHLLFAGEQFCNQYVLPCQVQGTNDSSVVSKVSAAAQGYFHDDFLRHFVGK
VSRRAPLINRGYYVRWKAVDRCVKQFLCVTDACDRRQILSLGAGFDSLFFRLHAEGALER
VSVFEVDFPDVARRKASLISSNHILKDALPDCRVVAGPVYVNSAHYNLLGVDVRNEREVE
EALSAAGLQWNSPTLILSEVVLTYMETRWSDAVIGWAARILPQALFVMYEQIRPEDPFGT
VMQNHFLKLNSKIHALCQYPDTATQTERLLQKGWEKCVCLDMNQFYFGLLTEDERERVEK
LEPFDEFEEWHQKCSHYFILTASKGSLTSHAVLTLPRDTPIPSIKPDLKGLPMAVRLMAG
APCVEAMGMASSLLEPGVVLLTGGCGRRGRNTAATFLIREHTAWRCVTVEPEGEKGVRLY
HSMTSVPGWGAVILGGRTSPLNPIDDILRVTYLTDQFNSKNMLVSMEKMVCTGTAPKPRW
RHTATLLSHGDRNYLFVFGGRTETEPVLGDAHFLCLEDQHWTDVPAEGCIPEPRHSHSTC
AYTQGLAMFGGLGRGGVPLGDVVLLKPTAIGFCWEKLHVFPALVPRYSHSAHVIGENLVV
VGGVWLQADGVPGVAVINLTTGVSVEVSLDTSSVPWPLMLHSFCSELLDSDRAEMVLIGG
GGNCFSFGTHLNSHPVILDLRPVLQNTARFDHPVKTPLET
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgttaactaatttcagaagagtagagccgcatctcctgtttgctggtgaacagttttgt
aatcagtatgtccttccctgtcaggttcagggcactaatgacagcagtgtggtcagtaag
gtgtcagcagcagctcaaggctacttccacgatgactttctcagacattttgtgggcaag
gtgtcacgaagagctcctctcatcaacaggggctattatgttcgctggaaagctgttgat
cgctgtgtgaaacagttcctgtgtgttactgatgcctgcgataggagacagatcctgtct
ttgggtgcaggcttcgactcccttttcttccggcttcacgcagaaggagcgctggagcgg
gttagcgtattcgaggtcgacttccctgatgttgccagacgcaaggcgtccttaatcagc
agcaatcatattctgaaagatgctcttccagattgcagagtcgtagctggccctgtgtat
gtgaacagtgctcactataacctgctgggcgtggatgtgaggaatgagcgagaggtggag
gaggctctgagtgcagccggactacagtggaactcccctacactgattctctcagaggtg
gtgctcacttatatggaaacacgctggtcagatgctgtgattgggtgggcagcgaggatc
ctcccccaggctttgtttgtgatgtatgaacaaatccgcccagaggatccctttggcaca
gtcatgcagaaccacttcctgaagctcaactccaaaatccatgccctctgccagtaccca
gacacggcaacacagactgagagactgttgcaaaagggatgggagaaatgtgtatgcttg
gatatgaaccagttctacttcggtcttttaacagaggacgagagggagagggtggagaag
ttggagccgttcgatgaatttgaggaatggcatcaaaagtgctctcattacttcatcctc
accgcctccaaaggctctctgaccagtcacgcagtcctcacactccccagagataccccc
attccctcgataaagcctgatctgaagggtctgcctatggcagtgcggctcatggctgga
gctccatgtgtagaggccatgggaatggcctcctccctgctggagcctggggttgtactc
ctcacagggggctgtggaagacgaggccgaaacactgcagccacgtttttgatcagagag
cacacagcctggagatgtgtcactgtggagccagagggagagaaaggtgtgaggctgtat
cactccatgacctctgtccctggttggggtgcagtaattctaggtggcagaacttctcca
cttaaccccattgatgacattctgagagtcacctatctgactgaccagtttaactccaaa
aatatgctggtatctatggagaagatggtctgtactggcacagcgccaaaaccaagatgg
cggcacacagctaccttactgagtcatggtgataggaactacttatttgtttttggaggc
cgtacagaaacggaaccggttctaggtgatgcacacttcctgtgtttggaggaccagcac
tggacagatgtcccagctgaaggctgcatccctgaaccacgccactcccactccacatgt
gcctatacacaaggactggcgatgtttggcggcctgggccgaggaggtgtccctttagga
gacgtcgtcctgctgaagcccacggccataggtttctgctgggagaagctgcatgtcttt
ccagccttggtgccaaggtattcccattctgcccatgtgattggtgagaatctggtggta
gttggtggagtctggctccaggcagatggtgtcccaggagttgctgttataaacctgacc
actggggtcagtgttgaagtcagcttagacacatcatctgtcccctggcccctcatgcta
cattcattctgctcagagttgctggactcagacagagctgagatggtgctcattggtggt
ggaggaaactgcttctcttttggcacccacctcaattcccaccctgtcattctagacctg
aggccagtgcttcaaaacacagcacgtttcgaccacccagtcaaaacacctctggaaaca
tag
DBGET
integrated database retrieval system
