Ictalurus furcatus (blue catfish): 128608732
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Entry
128608732 CDS
T09387
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128608732 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128608732 (clasp1a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128608732 (clasp1a)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
128608732 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
Adaptin_N
RTP1_C1
Paxt-1_C
MMS19_C
ParcG
HEAT_DAAF5
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
128608732
NCBI-ProteinID:
XP_053482674
LinkDB
All DBs
Position
6:15623053..15689870
Genome browser
AA seq
1560 aa
AA seq
DB search
MEPNMEYCLAQVLQKDVGRRLQVGQDLIDYITDKEKSHDLEQDQTALDKMVDGLASSWVN
SSNFKLALLGIDILSTLVTRLQDRFRTQIGTVLPSLIDRLGDAKDQVRDQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNVYGAQGLTLNKIVPHICNLLGDPT
SQVRDSAMNCLVEIYRHVGERVRVDLTKKGLPQSRLNVIFARFDEVQRSGNMILSTGSDK
NFDDEDSVDGGRSSSSTSSKGLSSSRRGGNMGSMRRPSSASAPRAAGKEGASAGAVDEED
FIKAFEDVPTVQIYSSRELEDSMTKIREVLSDDKHDWEHRVAALKKVRSLLLAGAAEHEG
FLQQLRLLEGAFKLSAKDLRSQVVREACITLGHVSSVFGNKFDHGAEAIMPTLLNLVPNS
AKVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHALE
RHVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKAIQSYLK
SSDSIVSLPQSDRSSSSSQESLNRPLSVRSVMGGSMTRSKVVGSRTPSSTPGSLQRSRSD
VDVNAAASAKSRMPAVPSLPSPSPFSSAAALPPGSYASLGRVRTRRQSSGSAVGANATVT
DSRGRSRAKVASQSQPGSRSSSPGKLLGHAYGRVPRTTAMASTSSDKRARVPRSQGCSRE
TSPSRALGIAELCGKALLPAASRYRTLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGF
TPLDRFGLLHQARISASVNAMRVLNTGTDVEAAVADALLLGDSRNKRKPMRKRYESPGMY
SDDDANSDASSACSERSYGSRNGGVPHYLRQTEDVAEVLNHCASANWSERKEGLLGLQNL
LKSQRVLSRVEMKRLCEIFTRMFADPHSKVFSMFLETLVDFVTVHREDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIE
SLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWASEEFSGRPSTTAVLPG
EGNLEERCKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHTHLKNSSSTSGVS
SPSNTIGRTPPRHPSSRTSPLTSPTNSSHTGLSPSMLEYDTENMNSDEIYSSLRGVTEAI
QSFRYRSEEDLNEPIRREFKKDDGVGRDTASPGSDSRLGLDIVEGGRTALDNKTSLLNTP
SPRSFAGPRTREFAPYGYGDTIGGYDKSALKEAVFDDDVEQFRDCRRQECSENKMVLSKG
FSPDLVADLLKELSNHNERVEERKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDK
DHTIRAMALRVLKEILRIQPGRFKNYAELTIMKTLEAHKDTHKEVVRAAEESASTLAGSI
HPEQCIKVLCPIVQTADYPINLAAIKMQTKVVERIVKDSLHQLLPDIIPGLLQGYDNTES
SVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaatatggagtactgtctggcacaagtgctgcagaaggacgtgggccggagg
ctgcaggttggtcaggatctcatcgactacatcactgataaggagaagtctcatgacttg
gagcaggatcaaactgcattggacaagatggtagatggcctcgcttcttcctgggtcaac
tccagcaacttcaagttggctttgctgggaattgacattttgtccaccttggtgacaaga
ttgcaagaccgtttccggacccagattggaacagttttacctagcttgatagatcgatta
ggtgatgccaaagatcaagtcagagaccaggatcagactctgctgctgaagatcatggac
caggccgctaaccctcagtacgtgtgggacagaatgctcgggggattcaaacacaaaaac
aacaggaccagagaaggcgtctgtctttgtctcattgcaacattaaatgtgtatggtgcc
cagggcttaactctaaacaaaattgtaccgcatatatgcaatctgttgggagaccctaca
agtcaggtgagggacagtgccatgaattgccttgtggaaatatatagacatgttggagaa
agggtcagagtggacctcaccaagaaaggattgccacaatcacggttgaatgtaattttt
gccagatttgatgaggtccaaagatctgggaacatgatcctctctactgggtcagataag
aactttgacgatgaggactctgtggacggaggcaggtcctcctcttccacttcatctaaa
ggtctgtccagcagcaggcgaggaggaaacatgggctcaatgagacgacccagttcggcc
tcagcacccagagctgcagggaaagagggagccagtgcgggagctgtcgatgaggaagat
tttattaaggcgtttgaagatgtccctactgtgcagatctattccagtagagagctggaa
gactccatgactaagatccgggaggtgttgtcagatgataaacatgactgggagcacaga
gtggctgctctgaagaaagtacgctcgctgctcctggcaggagccgcagaacacgagggt
ttccttcagcagcttcgacttttagaaggtgccttcaagctatctgcaaaagacttgcgc
tcccaagtggtccgggaggcctgcatcactcttggacatgtgtcctcagtgttcgggaac
aaatttgaccacggagcagaggccatcatgcccacgctgctcaatctcgtgcctaacagc
gccaaagtcatggccacatcaggcatggctgctattcgtcttattttacggcatacacac
tatcctcgtcttatcccaatcatcaccagtaactgcacatctaaatcagtagctgttcga
agacggtgttatgaatttcttgacctgttgttgcaagaatggcagacccatgcactagag
aggcatgtcgcagttctcactgagaccatcaagaaaggaattcatgacgctgactcggag
gccagatctatagccagaaaatgttattggggatttcacggccactacagccgagaggct
gagcacctgtttcaggctctggagtcgacctatcagaaggccatccaatcttacctgaag
agttctgacagtatagtgtcactgcctcagtctgaccgttcctcctccagctctcaggag
agcctcaatcgaccactttctgtgaggagtgtgatgggaggaagcatgaccagaagtaag
gtggtgggctccagaacaccgtcctccaccccaggctcactccagcgctcacgcagcgac
gtcgacgtgaacgccgctgctagtgccaagtcccggatgcctgccgtgccctctctaccc
tctccttcccccttcagctcagctgcagccctccccccaggatcctatgcctccctgggt
cgcgtgcgcaccagaaggcaaagctccggaagtgcggttggtgcaaacgctacagtcaca
gacagccgaggtcgaagcagagctaaagtggcatctcagtctcagcctggcagccgttcc
agttccccaggaaagctgctgggtcacgcatatggcagagtcccgcgtaccacagccatg
gcttctacatcctcagacaaacgagcaagggtcccaagaagccagggctgcagccgagag
accagcccaagcagagccctgggcatagctgagctgtgtggtaaagctcttcttcctgct
gcttctcgttaccgcacgctagcccggagcagtcgcatcccacgccccagcatgagtcag
ggctgcagccgtgacaccagtcgcgagagcagccgcgataccagccccgctcggggtttc
actcctctggatcgatttgggctactccaccaagcccgtatttctgcctctgtcaatgcc
atgagagttctgaacacggggacagacgttgaggcagctgtggctgatgctttactgtta
ggagactccaggaataagcgtaaacctatgagaaagcggtatgagtctccagggatgtac
tcagatgacgatgctaacagcgatgcatccagcgcatgctctgagcgctcatacggatcc
cgtaacggaggagtaccacactacctacggcagacagaggatgtcgctgaggtgcttaac
cactgtgctagtgccaactggtctgagagaaaggaaggactcctggggttgcaaaactta
cttaagagccagcgcgtccttagccgagtggagatgaaaagattatgtgagatcttcacg
aggatgtttgcagatcctcacagcaaggtgttcagcatgttcctggagactctggtagac
tttgtcactgttcatagagaggaccttcaggactggctttttgtcctgctcactcagctg
ctaaagaagatgggcgctgatctcctgggttcagttcaggccaaagtccagaaggctcta
gatatcactcgtgagtctttcccattcgaccaacaattcaacatccttatgaggtttatt
gtcgatcaaacgcaaactcccaacttgaaggttaaggtggccatcctgaagtacattgag
tccctggcaaggcagatggaccctgcagactttgtgaattccagtgagacaagattagct
gtgtcccgcatcataacctggaccacagaacccaaaagctctgatgtcaggaagaccctt
cataactgggcgagtgaggagttttcaggcaggccaagcactacagccgtgctgcccgga
gagggtaatctggaggaaaggtgtaagcaggctgcccaggtggtgctgatctctctcttt
gagctgaacacgcctgaattcaccatgcttcttggagctttgcccaaaacattccaggat
ggagccaccaagctcctccacacccacctgaagaactctagcagcaccagtggagtgagt
tctcccagcaacacaattggtcgtacaccacccaggcatccatccagcaggacgagcccc
ctcacctctcccactaactcctctcacactggtctttcaccaagtatgctggagtatgac
accgagaatatgaactctgatgaaatctacagttcactgcgtggcgttacagaggccatc
cagagctttagatatcgcagcgaggaggacctcaacgagccaatcagacgtgaattcaag
aaggatgatggggttggcagggacactgcatcacctgggtcagattctcggttaggtttg
gatatagtggagggagggcgcactgccttggataacaagacgtctctgctcaacaccccc
tctccacgttcttttgctgggccaaggacacgagagtttgcaccatatggctatggagac
accattggtggttatgataagagtgctttgaaagaggctgtctttgatgatgacgtggaa
cagttccgtgattgccgtcggcaggagtgcagtgagaacaagatggtgctctccaagggc
ttttctcctgacctggtggcagacctgctgaaagagctgtccaatcacaatgagcgagta
gaagagagaaaaggggcactggtggaacttctgaagatcacccgagaagacagcctagct
gtgtgggacgagcattttaaaaccatcctattgctgctcctggagacacttggagacaaa
gatcacactattcgagctatggctctgcgtgttctcaaagaaatcctaaggattcagcca
ggccgcttcaagaactatgcagaactcaccatcatgaagacattagaggctcacaaagac
actcacaaggaggtggtaagggctgctgaagagtctgcatccacactggctggctccatc
caccctgagcagtgcatcaaagtgctgtgtcccattgtacagactgcagactaccccatc
aacctagcagctattaaaatgcagacaaaagtcgttgaacgcattgtcaaagattctctt
catcaactgctgccagacattattcctggcctcttacaaggctatgacaacacagaaagc
agtgttcgcaaggccagtgtcttctgcctagtggccatctactctgtcatcggtgaagag
ctcaagccccacctggcacagctcacgggcagtaagatgaagttgctaaacctgtatatc
aagagagcccagacaaccaacagcaacagcagcagttcgtccgacgtgtcctctcacagc
taa
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