Ictalurus furcatus (blue catfish): 128608775
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Entry
128608775 CDS
T09387
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128608775 (nyx)
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
128608775 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRCT_2
LRRNT
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
128608775
NCBI-ProteinID:
XP_053482785
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All DBs
Position
6:17476400..17479950
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AA seq
449 aa
AA seq
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MVLPHGMTLWACSSSCPPSCMCTQEKSCTVLCDRVNMAELPREFPCDASTINLEKNSLKF
LSERAFGTLPVLKSLFLDHNNISFITPGAFRGLPNLLELTMAHNEYIRYLHTRTFTSLKR
LLRLDLSGCNLFNLPDRIFLEQTSLRELFCFQNNFRRIPSAIRGMENLTHVYLERNKIEA
VAYNTLLGLCNLKYLNLQENRISVIHDEAFKDLRQLQNLYLNDNLLVDLPRRSFKGLCNL
KMLNLGGNLLTNISNTWFGDLVELEVLYLDRNWLSFIDKGAFENLTSLMTLHLNSNKLTS
LPFSIFQPIYFIGHLYLFRNPWECSCELAWLKKWMENYKLVRDIPCASPPSVAGLDLSKV
LYAHVNGTCIDPAEFNLTTAVPDYSTMQRKFNSLISTLMNQEFREVERNFTEGQRNGTVL
EPAEGQVSAAHRPSSVGLVLLLLLPHIQA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtcctacctcatggcatgactctctgggcctgctctagttcctgtccccccagctgc
atgtgcactcaggagaagagctgcactgtgctctgtgaccgtgtcaacatggctgagctg
cccagagagttcccctgcgatgcctccaccatcaacctggagaagaacagcctcaaattt
ctgtcagaacgagcttttggaacacttcccgtgcttaagtccctcttcctggatcacaat
aacatctccttcatcacaccaggagctttcagagggcttcccaacctgctggagctcacg
atggcccacaacgagtacatccgctatcttcacacacggaccttcacctccctcaaacgc
cttttgcgcttggacctttctggctgtaacctcttcaacttgcctgaccgcatcttcctg
gaacagacctccctcagagagctattctgcttccagaacaatttcagacgcatcccaagc
gctatacgaggaatggagaacctgacgcatgtttacttggagcgcaataagatcgaagcc
gtagcctacaacactctgctcggactatgcaacctcaagtatctgaacctacaggagaat
cgtatcagtgtcatccatgatgaagcctttaaggacctaagacaactacagaacctttac
cttaatgacaatctgttggttgacttgccaaggagatctttcaaaggcctctgcaatcta
aagatgttaaatctgggtggtaaccttctaaccaatatctccaacacctggtttggggac
ctggtggaactggaggtactctacttggaccggaactggctgtcatttattgacaagggt
gcctttgagaatctgaccagcctcatgacactgcatctcaacagcaacaaactgacgtct
ctgcctttctccatcttccagcccatctacttcatcgggcatctttatttgttccgcaat
ccctgggagtgcagctgtgagctggcatggctgaagaagtggatggagaactataagctg
gtgagggatatcccatgtgcttcccctccttcagtagctggtctggatctgagcaaggtg
ctgtatgcacatgtgaacggaacttgcattgacccagcagagtttaacctaaccacagct
gttccagattacagcacaatgcagcgcaagttcaacagcctgatctccacactgatgaat
caggaattcagggaggtggagaggaactttactgaaggccagaggaacgggacagtgctg
gaaccagcagaaggtcaggtctcagctgctcacaggccttctagtgttggtttagtcctg
ctattactgctgccccacatccaagcttag
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