Ictalurus furcatus (blue catfish): 128608814
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Entry
128608814 CDS
T09387
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128608814 (col14a1a)
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Others
128608814 (col14a1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_2nd
VWA_3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
128608814
NCBI-ProteinID:
XP_053482873
LinkDB
All DBs
Position
1:13078829..13191508
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AA seq
1856 aa
AA seq
DB search
MTAWWLLIFLALVQFPGPSKGQIAGPRRLRFKVLGPDKLHVLWKEPKGEYDGYRFIYNSV
PDGERNELRIGKGQTKAIINDFNPTKEYAVKVIAVSGSQQSRALEGSFAAQGREFDRENT
PPQRIKEVPTEAGIQLSGVDQFVCTTSAVADIVILVDGSWSIGRLNFRLVRTFLENLVNA
FDVGIDKTRIGLAQYSGDPRIEWHLNAFTTKESVIDAVKNLPYKGGNTLTGLALTYILKN
SFKPESGSRSNVPKIGILITDGKSQDAVDIPAQNLKYAGVEIFAIGVKNADENELKVIAS
EPHDTHTYNVADFSIMDTIVEGLTKTVCDGVEQQDREIKRDSVPEDTPNAPQDLVTSEVT
VRSFRVSWSHAPGSVLKYRVIYYPSKGGQPEEVVVDGTETSAVVKDLSSLTEYEIAVFAV
YTDSASEALRGRETTLAMPVVSGLELYDVTHNAMRARWNPTEGVSGYMLVYAPLSSEAID
ETEVKVADTVTEFGLVGLSPDTEYTVTVYAMFGDEASDPATMQETTLALRAPRNLRVTEV
DHNSVRLNWDTPSSAVNGYRLKYGQSNGAQTNEVETGPVSNVYLRNLASQTEYTVSVFAV
YDGDQSEPLKGVFTTKLVPAPRTIRIDEVTPNSFRVSWTQPGDGVKLYKLAWRPFGGGDT
KQVAVSGDINTYVVNDLSPLTEYEVLLSAIYRDEAESSAVPALETTLPMPATTAFPSTTP
PVTRLGVTNLLVDDETTSSLQVSWDIDDADVEEYRVTYVSERGDREEESVLVPGNRKSVM
LQPLLSDTEYKITVNPIYPEGEDSAFSLSSIGRTLPLTAPNNLRVSEEWYNRFRLTWDTP
ASPTMGYRIIYQPTSESGPALETFVGEDVNTLLILNLLPGTEYSVKVISSYTTGSSEALT
GIARTLFLGVSGLRTYQVQMNSMCAQWQPVSQASLYRVIIESLRNGHREEHSVSGGASRQ
CFFNLSPNTQYKISVYTQLQSMEGPAVTIVDTTLPAPTQPPTPPPTTALIPTIPPAKEVC
KAAKAELVFLVDGSWSIGDDNFQKIIRFLYSTTGALDIIGPEGTQVAIVQFSDDARTEFK
LSSYRDKESLLDAVQRITYKGGNTKTGRAIKHVKESIFTEEAGVRRGIPKVLVVLTDGRS
QDDVNKISKDLQTEGYIIFAIGFADADYGELVNIASKPSEKHVFFVDDLDAVNKIEEQLI
TFVCEAATATCPSLLMSGNTLAGFRMMEMFGLVEKDYSNVQGVSMEPGTFNSFPCYRLHK
DALISQPTKYLHPEGLPSDYTVSVLFRILPETPQEAFALWEILNKANEPLVGLILDNGAK
TLIFFNYDYKGDFQTVTFEGPDIRKIFYGSFHKLHVAISKTSAKVVIDCKIVGEKPISAA
GNITTDGMEVLGRMVRSRGSRDNSASFQLQMFDIVCSTSWASRDKCCELPGLRVEKDCPA
LPHACTCSQDSKGPPGPTGPPGGPGIRGSRGDRGEPGSVGPQGPTGEIGPPGPQGPPGPQ
GPSGLSIQGPPGSAGEKGEKGDSGLPGPQGVPGASGGPGRDGRPGQRGLPGKDGPQGQHG
PPGPIGSPGAPGAPGTTGPPGPHGDHGPPGPHGTKGERGERGDMQSQAVVRSIARQVCEQ
LIQSHLSRYNSILNQIPSQSVSVRTVPGPPGEPGRPGPPGPQGEQGPSGRPGFPGGNGLS
GRPGERGLPGEKGEKGSPGVGTQGPRGLPGPPGPPGEGRTGSQGPPGRPGTQGTPGHPGS
PGKPGAAGPPGYCDQNACLGYNIGVQQLPPSSYQNYGPTDTNDEEEQEEEDPFGGYRRYP
PQYYEPSYPNPRVAQPGTAYPGAMMRERGTHRFSRSLTERSIAQTTTQEEEDKSAH
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtggtggctgctcatattcctggcactggtgcagtttccaggaccttcaaag
ggacaaattgcaggcccacgaagactgcgatttaaagtcctgggtcctgacaagttgcat
gtgttatggaaagagccaaagggagaatacgatggctatagatttatttacaacagtgtg
ccagacggcgagaggaacgagcttcgaattggaaagggtcaaaccaaggcgataataaat
gacttcaatcccacgaaggagtatgcagtcaaggttatcgctgtgagcggaagtcagcaa
agcagagcacttgaaggaagctttgcagctcagggccgggaatttgacagagaaaacaca
ccaccacagagaataaaggaagtgcctacagaggctggtattcaactatctggagtggat
cagtttgtgtgcaccacatctgcggtggctgatattgtcatcctggtagacggttcatgg
agtatcggcaggctcaatttccgtctggtgcgcacattcctggaaaacctggttaatgct
ttcgatgtgggaattgataaaacccgtataggattggcccagtacagtggagatcccagg
attgagtggcatcttaatgcttttaccactaaagagtctgtcattgatgctgttaagaac
ctgccatacaaaggaggaaacacactcacaggtttggcccttacatacattctgaagaac
agcttcaaaccagaatctggttctcgaagcaacgttcctaaaatcgggatcctcatcacc
gatgggaaatctcaggatgccgttgacattcctgcccagaacttgaagtacgccggggtt
gagatcttcgccattggggtaaagaacgcagatgaaaatgagttgaaggtcattgcttct
gagccacacgatacgcacacgtacaacgtggccgacttcagcatcatggacactatagtg
gagggtctgaccaagactgtgtgcgacggtgtggaacaacaagacagagagatcaaaaga
gattcagtccctgaagacacaccaaacgctcctcaggacttggtgacgtctgaagtgact
gtgcgaagtttccgtgtgtcctggagccatgcgccaggcagtgttctgaagtaccgtgtg
atttactatcccagcaaaggaggtcagccagaagaagttgtggtggacggcaccgagacc
tcagcagtggtgaaagacctcagctccctgactgagtatgagatcgctgtgtttgctgtg
tacacagactcggccagtgaggctctcaggggcagggagaccacactggctatgcctgtg
gtcagtggtctggagctgtatgatgtgactcacaacgccatgcgtgctcgatggaaccct
acagaaggggtttctgggtacatgcttgtgtatgcacctctaagcagtgaagctattgat
gagactgaggtcaaagtagcagacaccgtgacagagtttgggctggtgggtttaagtccg
gatacagagtacaccgtgacagtttatgccatgttcggagacgaggccagtgatcctgct
actatgcaggagaccaccttggctctgagggcacctcgtaatcttcgtgtcactgaggtg
gaccacaattcggtgcggctcaactgggacacaccgtcaagcgcagtcaatggctatcgg
ctgaagtacggccaaagtaacggtgcacaaactaatgaggttgaaacaggtccagtttcg
aacgtgtacctaaggaacctggcctctcaaacagagtacacagtatctgtgtttgctgtg
tatgatggggatcagtcagaacccctgaagggagtcttcaccacaaaactcgttccagct
ccacggaccattaggattgatgaggtgacaccaaatagtttccgggtgagctggacacaa
ccaggggacggtgtcaagctttataaacttgcctggagaccctttggaggaggagacact
aaacaggtggccgtatcaggcgacataaacacctatgtggtgaatgatctttctcctctt
actgagtatgaagtgctgctgtctgctatctacagagatgaggctgagagcagtgctgta
cctgcattagagaccacactgcccatgcccgctaccacagccttcccatctacaacccca
ccagtgacgcggctgggagtgactaacctgctggtggacgatgagaccacgagcagtctg
caggtcagctgggacattgatgatgcagatgtggaggagtacagagtgacctacgtcagt
gagagaggagaccgtgaagaggagtcggtgctggtcccaggcaatagaaagagtgtgatg
ctgcagcctctcctctcagacacagaatacaagatcacagttaaccctatttatcctgag
ggggaagatagtgcattctctctgtcctccattggccgtacattaccactgactgcacct
aacaacttgagggtgtctgaggaatggtacaaccgcttccgcctcacctgggacacacct
gcctcacccaccatgggctacaggatcatctaccagcctacttctgagtcgggtcctgcg
ctggagacgtttgtaggagaagatgtgaacacactgctgatcctcaacctgctgcctggc
actgaatacagcgttaaggtcatttcttcatacacaacaggctctagtgaggctctcacc
ggcatagccaggacactgtttctgggagtcagtgggctcagaacataccaggtgcagatg
aacagcatgtgtgcacagtggcagcctgtcagccaggcctccctctacagggtcatcata
gagtccctgcgcaatggccaccgagaggagcacagtgtaagtggtggagcctccaggcag
tgtttcttcaacctgtcgcctaacacgcagtacaagatcagcgtctacacacagctacag
agcatggagggccctgccgtcaccatcgtggacaccacacttccagctccaacccagcca
ccgactccacctcccaccaccgccctgattcccaccatcccaccagctaaagaagtttgt
aaagcagccaaagcagagctggtgttcttggtagacggctcctggagcataggagatgac
aacttccagaagatcatccgcttcctatacagcaccactggcgctttggatatcattggt
cctgaaggaacacaggtggccatcgttcagttcagtgatgatgccaggactgagttcaag
ctcagctcctacagggacaaggagtctttgctggacgctgtgcagcgcatcacctataag
ggaggaaacaccaaaacaggtcgagccattaagcatgtgaaggagagcatctttacagaa
gaggctggtgtgaggaggggaattcccaaagtcctggtggtgctcacagatggccgctca
caggacgacgttaataagatctccaaagacctacagacggagggttacatcatctttgcc
attggctttgctgacgcggattacggggagctggtgaacattgcaagcaagcccagcgag
aaacatgtcttctttgtagacgatctggatgcagtcaataaaatcgaggagcagctcata
acatttgtgtgtgaggcagcaacagccacttgtccgtctttgctgatgagtgggaatacc
ttggcaggtttccgtatgatggagatgtttgggctggtggagaaggactacagtaatgtg
cagggtgtttccatggagcctggaactttcaacagtttcccttgctacaggctgcacaag
gatgctctgatctcacagccaaccaagtatctgcaccctgagggactcccttctgactac
accgtgtcagtgctgttccgcatcctgccagaaactcctcaggaggcctttgcattgtgg
gaaattctcaataaagccaatgaacccctggtgggtctcatcctggacaatggtgcgaaa
acattgatattctttaactatgactacaagggcgatttccagacagtgacctttgaagga
cctgacatcagaaaaatcttttacggcagttttcacaagctccatgtggcaatcagcaag
acgtctgcgaaggtagtgatcgactgtaagatagtgggtgagaagcccatcagcgctgct
gggaacatcaccacagatggaatggaggttctgggccgaatggtgcgctcacgtggcagc
agggacaactcggcatcgtttcagcttcaaatgtttgatattgtctgcagtacgtcatgg
gccagtcgagataaatgctgtgagctcccaggcctgagagtagagaaagactgtcctgct
ctgcctcatgcatgcacctgctcacaggacagtaaaggaccaccaggacccactggacct
ccaggtggtcctggtataagaggctcaagaggtgaccgaggggaaccaggctcagtggga
cctcaagggccaactggtgaaattggacctccaggacctcaggggcctcctggaccacag
gggccaagtgggctctctatccagggaccaccaggatctgcaggagaaaaaggagagaaa
ggtgactcgggtctgccaggtcctcagggtgtaccaggagccagtggaggacctggcaga
gacggccgaccgggacagaggggtttgcctgggaaagatggaccacagggacaacatggc
ccaccaggacctattggcagtccaggtgctcccggagctccaggaaccactggaccccca
ggaccacatggtgatcacggaccacctggtcctcatggtaccaaaggcgagcgaggggag
aggggtgacatgcagtctcaggcagttgtccgctctatagccagacaagtgtgtgaacaa
ctaattcagagccacttgtctcgctacaactcaatcctgaatcagatccccagtcagtct
gtgtcagtccggacagtgccaggtcctccaggggaaccaggccgtcctggccctccgggg
ccacagggagagcaggggccttcaggcagaccaggcttccccggaggtaatggactgagt
ggccgtccaggagagagaggcctcccaggagagaaaggagagaaaggcagtccaggtgtg
gggacacagggaccacgtggcctcccaggacctccaggtcctccaggtgagggccggaca
ggaagccagggtcctccaggcaggcctggaactcagggcactccgggtcaccctggaagt
cctggaaagcctggtgctgctggaccaccaggttactgtgaccagaacgcctgcttaggg
tataacataggagtacaacagttacctcccagttcctaccaaaactacgggcccactgac
actaatgatgaagaagagcaggaggaagaggacccgttcggtggataccgccgctaccca
ccccagtactacgagcccagctatccaaaccctcgtgttgcccagcctggcactgcttat
cccggtgccatgatgagggagcgaggcacgcaccgcttctcccgcagcctgactgagagg
agtatagctcagaccacaacacaagaggaagaagataaatctgcacactga
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integrated database retrieval system
