Ictalurus furcatus (blue catfish): 128608875
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Entry
128608875 CDS
T09387
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04814
Motor proteins
ifu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128608875 (dync1i2a)
09142 Cell motility
04814 Motor proteins
128608875 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128608875 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128608875 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128608875 (dync1i2a)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
128608875 (dync1i2a)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
128608875 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
128608875
NCBI-ProteinID:
XP_053482998
LinkDB
All DBs
Position
6:complement(20375674..20417319)
Genome browser
AA seq
635 aa
AA seq
DB search
MEIVPQISIMSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEAEQLKEPVVVQDDSD
LEKKRRETEALLQSMGIAPDVHAVPGPLSPTAKSAGTPSEAGSQDSGDGTTGPRTLHWDS
DPSTLLLHSELGRGPAKLSIVKVTQVDFPPKEVVSYTKETQTPTMSEQKEEEEEEEELPP
AEAVTEVKKETSVQEQEEEVPPHELTEEEKLQILHSEEFMDFFDHSTRIIERALSERVDV
FFDYSGRDLEDKEGEMQAGAKLSLTRQFTDERWSKHRVVTCLDWSPQYPELLVASYNNNE
EAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFVKFHPNLVVGGTYSGQIVLWDNR
SNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSME
LVFKQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTSCRHGSKAGISEMFEGHHGPITGIH
CHTAAGSVDFSHLFLTSSFDWTIKLWSTKNNKPLYSFEDNSDYVYDVMWSPVHPALFACV
DGVGHLDLWNLNNDTEVPTASVTVEGTPALNRLRWAQTGREIAVGDSDGQVLIYDVGEQI
AVPRTDEWTRFVRTLTEINENREDAEELVAQRIPS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtgccacaaatcagcatcatgtcggataagagcgagctgaaggcagagtta
gagagaaagaagcagcggctcgcgcaaataagggaagaaaagaagagaaaagaggaagaa
cgcaagaaaaaagaggcggagcagctgaaagaacctgttgtggtgcaggatgactctgat
ctggagaagaagaggagagagactgaagcgctgcttcagagcatgggaattgcaccagat
gtgcatgcagttcccgggcccttgtctcccacggccaaatctgcaggcaccccgagtgag
gcaggtagccaggattcaggagacggcaccacaggacccaggactctccactgggactct
gatccttctacattactgcttcactccgagctggggcgaggcccagcgaaactgagcatt
gtaaaggtgactcaggtggacttccctcccaaagaggtggtgtcttacaccaaggagact
cagacccccaccatgagcgagcagaaagaggaggaagaagaggaggaagagctgcctcct
gcagaagcagtgaccgaggtgaagaaggagacatcagtgcaggaacaagaagaagaagtg
ccccctcatgagcttaccgaggaggagaagctgcagatcctgcactcggaggaatttatg
gacttctttgaccacagcacacgcatcatcgagagagctttgtccgaacgtgtcgatgtt
ttctttgactacagtggccgtgaccttgaggacaaggagggtgagatgcaggctggagca
aaactgtctctgaccagacagttcacggatgagcgctggtccaaacacagggtggtcacc
tgcctggattggtccccacagtatcctgagctgctggttgcctcctataacaacaacgag
gaggcaccgcatgagcctgatggagtggcgctggtctggaacatgaagtataagaaaact
acgcccgagtatgtctttcactgccagtctgcagtgatgtcagctgcgtttgttaagttc
caccctaacctggtagtaggtggtacgtattcaggacagattgtgctatgggacaatagg
agtaacaagcgaactccagtgcagaggaccccgctttcggccgctgctcacacgcatcct
gtttattgtgtgaatgtcgtcggcactcagaatgctcacaacctgatcagcatctccacc
gatggcaaaatgtgctcatggagtctggacatgttgtcccagcctcaggacagtatggag
ttggtgtttaagcagtctaagtctgtagcagtcacttccatgtctttccccctgggtgac
gtcaataactttgtggtaggcagcgaggacggatcggtctatacgtcctgtcggcacggc
agtaaggcaggtatcagcgagatgtttgagggccaccatggtccaattacaggaatccac
tgccacacagcggctggttctgtagacttctcccatctctttctcacctcttcctttgac
tggaccatcaaactctggagcactaagaataataagccgctctactcgtttgaggataac
tctgactatgtgtatgatgtgatgtggtcgcctgttcaccctgccctctttgcttgcgtg
gatggagttggccatttagacctgtggaacctcaacaatgacacagaggttcccactgcc
agtgttacagtggaggggactcctgctctgaataggctgaggtgggcacagacaggccga
gagattgctgtgggagactctgatggacaggttctcatttatgatgttggagagcagatc
gccgtgccgcggactgacgagtggacacgcttcgtcaggacgctcacagagattaatgaa
aaccgcgaggatgccgaggagctcgtggcccagcgcatcccgtcctaa
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