Ictalurus furcatus (blue catfish): 128609021
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Entry
128609021 CDS
T09387
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00100
Steroid biosynthesis
ifu01100
Metabolic pathways
Module
ifu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
128609021 (lss)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
128609021 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
128609021
NCBI-ProteinID:
XP_053483287
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Position
6:complement(25343228..25354352)
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AA seq
742 aa
AA seq
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MTEGTYVRRRRGGPYKTTAVTDLTRWRLSNVEGRQTWKYLKDEDTEEREQNFLEAHSVGL
DTSKFVPASPAAHTAVEAAQKGMEFYSHLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIS
LSEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTTLRILGVGPDDPDMVRARN
NLHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPTWMPAHPSTLWCHCRQVYL
PMSYCYAVRLSAQEDSLVLSLRQELYVQDYSIIDWPAQRNNVAESDMYTPHSTLLTAAYF
ILNLYEAHHSTALREKAVKELYDHIQADDRFTKCISIGPISKTINMLVRWHVDGPTSAAF
QEHVARIPDYLWLGLDGLKMQGTNGSQLWDTAFAVQAFLEAGAQNDPRFAQCLMKAHQFF
NLTQVKENPPDYIKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCGFITEHI
PSQRLFDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVM
QALQHFHHAYPEHRAQEIRRTLQQGLDYCRRMQRPDGSWEGSWGVCFTYGAWFGLEAFAC
MGHIFQDGYDGLACTEVWRASEFLLSKQMEDGGWGEDFESCEQRCYVQSKNSQIHNTCWA
LLGLMAVRYPDCIVIERGIQALIDKQLPNGDWPQENISGVFNKSCAISYTSYRNLFPVWT
LGRFSRLYPASSLARNLGGTER
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagggacgtatgtgaggaggagaagagggggtccctataagactacagcagtg
acagacctgacacgctggagactcagtaatgtagaaggaaggcagacatggaaatacctg
aaggacgaagacactgaggaaagggagcaaaacttcttggaagctcactctgtgggtctt
gacacgagtaagtttgttccagcctccccagcagcacacacagcggttgaagccgctcag
aaggggatggagttttacagccatcttcaggctgaggatggccactgggctggagactac
ggaggaccacttttcctgcttccaggtctcctgataacctgtcatgttgctaaaatctct
ctatcagaagcctggaagaaggagatggtgaggtatctacgttcagtgcagctgccagat
ggtggctggggtctgcatatagaagacaagtcgactgtatttggcacagctctcagttac
actacactgagaatcctgggagttgggcctgatgacccagatatggtacgggcaaggaac
aacttacacagcaaaggaggtgctgtaggtataccgtcctggggaaagttctggctggcc
atcctcaatgtgtacagttgggaagggatgaacacgctttttccagagatgtggctgttt
ccaacttggatgccggcacacccgtccactctgtggtgccactgcaggcaggtctacctt
cccatgagctactgttatgccgtcaggttgtctgcacaggaggattcactggtgctcagc
ttgagacaggaactgtatgtccaggactattcaattattgactggccagctcaaagaaac
aatgttgcagaatcagacatgtacacccctcacagcactctgctcactgccgcctacttc
atcctgaacctatatgaggctcatcacagtactgcactgagagaaaaagctgtgaaagaa
ctatacgatcacatccaagcagacgatcggtttacaaagtgcattagcatcgggccgatc
tcaaaaaccataaatatgttggtgcgctggcatgttgatggacccacatcagctgccttc
caggagcatgtggcgaggatcccagactacctctggctaggtcttgatggcttgaagatg
cagggaaccaatggatctcagctatgggacactgcctttgcagtgcaagcatttcttgag
gcaggtgcgcagaatgaccccaggtttgcacagtgtttaatgaaggcccatcagttcttt
aatctaactcaggttaaagaaaatcccccagactacatcaaatattacagacagatgaac
aagggaggctttcctttcagcacacgtgactgtggttggatcgtggctgactgcacagca
gagggcctgaagtcggtgatgttactgcaggagcagtgcggcttcatcacagagcacatt
ccctcacaaagactcttcgatgcagtcaatgtgcttttaagcatgagaaattctgatggc
ggctttgccacatacgagaccaaacgtggaggaaaactattagagctgctcaacccgtca
gaggtgtttggtgatatcatgatcgactacacttacgtggagtgcacgtcggctgtgatg
caagctctgcagcactttcatcatgcctaccctgagcacagagcgcaggagatcaggaga
actcttcagcagggacttgactactgcagaagaatgcaaagacctgatggctcatgggaa
gggtcatggggtgtgtgctttacatatggagcatggtttggattggaggcatttgcatgc
atgggtcatattttccaggatgggtatgatggactggcgtgtactgaggtgtggcgtgcc
agtgaattcctgctctctaagcagatggaggacggaggctggggagaggactttgagtca
tgtgagcagaggtgctatgtacaaagcaaaaattcccaaatccataacacctgttgggct
ctactgggtctgatggctgtcaggtaccctgactgcatagtcatcgagcgtggaatacag
gctttgattgataagcagcttcccaatggagactggccacaagagaacatctctggtgtt
ttcaacaagagctgtgctatcagttacacgtcctatagaaacctgtttccagtttggact
ctgggccgtttctcgcgtctctaccccgccagctcacttgctcggaatctgggaggcact
gagagataa
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