Ictalurus furcatus (blue catfish): 128609036
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Entry
128609036 CDS
T09387
Symbol
adarb1b
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128609036 (adarb1b)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128609036 (adarb1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
128609036
NCBI-ProteinID:
XP_053483313
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All DBs
Position
6:25649444..25833533
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AA seq
790 aa
AA seq
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MHLTVRENLQVFMTLEHFYKGHPLCLFVCFFFGRESVVAVYFRPSSSGSDRKGCVFPRSA
DPAGVQHQLLVDTEVCGAGVRQARAQQKLFTMDVDEEENMSSCSTDVKENRNLDNVFSKE
GASVPEQLPNGSGGGGRKRPLEEGNNGHAHPKFRPKKRKKTPGPVLPKNALMQLNEIKPG
LQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNAAEKALRSFVQFPNASEAH
LAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEDSFYLGSNTNGSINPLGEYPVPPVT
GNNSLAQAPLPPPTTFNTSSSGKNPVMILNELRPGLKYEFVSESGESHAKNFVMSVTVDS
QTFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREGLQLHLPQVLADAVSRLV
VDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVSTGTKCINGEYMSDRGLALN
DCHAEIIARRSLLRYLYMQLEYFLSNSKEEHEKSIFTRCEKHGYRLKDNVQFHLYISTSP
CGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTIPVRSSNTIQTWDGVLQGER
LLTMSCSDKIARWNVVGIQGSLMSYFTEPIYFSSIILGSLYHADHLSRAMYQRIADIEHL
PQQFTLNRPLLSGISNAEARQPGKAPNFSVNWAVGDQGLEVINATTGKDDMGRPSRLCKH
ALYSRWVRLHSKLLSTLRIKMAKPSSYHEAKQAAVEYHAAKQTLIKAFQKAGLGAWVKKP
IEQDQFSLSS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgacagtaagggaaaatttacaagtatttatgacactggagcacttttataaa
ggtcatcctctgtgtctgtttgtttgttttttttttggcagggaatctgttgtcgccgtg
tacttcagaccctcgtcttccggctctgatagaaaaggctgcgtttttccaaggtcagct
gatccagcaggagtccagcaccagctgctagtggacactgaagtgtgtggagccggagtg
cggcaggctcgggctcagcagaagctcttcactatggatgtggatgaggaggagaacatg
agttcctgcagcaccgacgtcaaggaaaatcgcaacctggacaacgtcttctccaaggag
ggggcgagcgtgcccgagcagctccccaacggcagcggagggggcgggcgcaaacgcccc
ctggaggagggcaataacggtcatgcgcaccccaagttcaggcccaagaaacgcaagaaa
acgccagggccggttcttcccaagaacgctctcatgcagctgaatgagatcaagccaggc
ctgcagtacaagctgctctctcagactgggccagtccatgctccagtctttgtcatgact
gtagaggtgaacgggcagctttttgaaggctcaggccccactaagaaaaaggcaaagctg
aacgcagccgagaaggcactacgctcgttcgtgcagtttcccaacgcttcagaggcacat
ctggccatgggccgaacgctcaccgtcaacacggacttcacatcagaccaggccgacttc
cctgacatgctcttcaatggctttgagactcctgcaccacccgaggactccttttacctg
ggctctaacaccaacggttccataaaccctctgggagaatacccagttcccccagtgact
ggtaacaacagcctggctcaggccccactgcctcctcccacgaccttcaacacatcgtcc
agcggaaagaaccccgtcatgatcctgaacgaactgcggccgggcctcaagtatgagttt
gtgtcggagagtggtgagagccatgctaaaaactttgtcatgtccgtgaccgtggactcg
cagacgttcgagggatcagggaggaataagaaactggccaaggcgcgggctgctcaggcc
gcactctcggctctcttcaacatgcagctggaccagacaccatctcgccagccaatcccc
agagagggcctacagctccacctgccccaggttttagcagatgctgtctcacgtctcgtg
gtggacaagttcagcgagctcaccgacaacttcacgtcccctcatgcacggaggaaagtg
ctagctggggttgtcatgacaacaggcaccgatgtgaaggaggcccaggtgatctgcgtc
tccactggaaccaagtgcatcaacggcgagtacatgagcgaccgtggcctggcacttaac
gactgccacgctgaaatcatcgcccgccgctcccttctccgctacctatacatgcagctg
gagtacttcctcagtaacagcaaagaggagcacgagaagtccattttcacccgctgcgag
aaacatggctaccggctcaaggacaacgttcagtttcacctgtacatcagcacgtcgcca
tgtggagacgctcgcatcttctccccacacgaggcaggcgtcgaagatcagggagacaga
cacccgaacagaaaagctcggggtcagctgagaactaagatcgagtcgggcgaggggacc
atcccagtgcgctccagcaacaccatccagacgtgggacggagttctgcagggggagaga
ctcctcaccatgtcgtgtagtgacaagatcgccaggtggaacgtggtggggatccagggc
tcgctgatgagctacttcactgagcccatctacttctcgagcatcatcctgggcagcctg
taccacgctgatcatctctctcgggccatgtaccagcgcattgcagacatcgaacaccta
ccccagcagttcactctcaaccggcccctgctcagcggaatcagtaacgcagaagcacgg
cagccaggaaaagctcctaacttcagtgtgaactgggcggtgggtgaccaggggttagag
gtcattaacgccaccacgggtaaggacgacatgggccggccttctcgcctctgcaagcat
gctctctacagccgctgggttcgactgcactcaaagctcttgtccaccttgcggatcaaa
atggccaaaccgagctcgtaccacgaagccaagcaggcagcagtggagtatcacgccgct
aagcagacgctcatcaaggccttccagaaagcaggattgggggcctgggtgaaaaagcct
atagaacaggaccagttttctctgagctcctga
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