Ictalurus furcatus (blue catfish): 128609067
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Entry
128609067 CDS
T09387
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128609067 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128609067 (xrcc5)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
128609067 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
128609067
NCBI-ProteinID:
XP_053483379
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All DBs
Position
6:27238483..27254518
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AA seq
726 aa
AA seq
DB search
MARAAKSAVVLCMDVGFSMSNSAPGEEAPFEQAKKIIQKFIQRQVFAENKNELGLVLFGT
DDTKNPLARDDQYQNICVHRHLMMADFDLLEEIEHNLQPGGQHADWLDALVVCMDLLQKE
TMGKKFEKLNIAVLTNLNTPACADQLDIIIGNLKKAGITLQFFLPFPVDADEGAAGDGDR
PGPRPPTQLGKGLSREQKKGLEMVRQVMTSLDEEDGLDDVYTFSDAVEKLSMFKRIERRP
TAWSCLLTIGSSLSIRINGYKTVCEEKIKKTWAIVDAESHQKDDVKRDTVYCLNDDNETE
VQKDDVIQGFRYGSDIVPFSKVDQEQMKYKSDGKSFAVLGFTKQELIHRHHFMGQQIVKV
FAAKDDEHAAVALSALIQALDSLKMVAIVRYIYDRRCNPQVGAAFPCVKDKYECLVYVQL
PYMEDLRQFAFPSLENNKKFVPSEAQLSAVDNLINAMMLVEEGEDGEKEDIFKVNKIPNP
QFQRLFQCLHHRGVNPGAPLPPMEPWLKRMLDRPQAVSARCRAPLQEMKKLFSLKEVVQK
KGQKTSADVFGNSTEEPDAKKFKVDEGEKFSLAETSEGNITSVGSVNPAENFRTLVQKKT
IPFDQACEQLTHRMEQLLGNRSTDYYMKTIACVQAFREQSIKVSNAELFNSYMQSLKNSV
PEKNLQAFWDLLVADSITLISKDEVDSSTVSKQEANQFLAFEEKEEVAAAPSHEDAGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcagccaagtcagctgtggtgctttgcatggatgtgggcttctctatgagt
aactcagcccctggtgaggaagccccattcgagcaagctaagaagatcattcagaaattc
atccaacgccaggtctttgctgaaaacaaaaatgagttgggcctggttctatttggaacg
gacgacaccaagaatccacttgctcgagacgaccagtaccagaacatctgcgtacaccga
catttgatgatggccgacttcgacctgctggaggaaattgaacataatcttcagcccggt
ggtcagcatgctgactggcttgatgctcttgttgtatgcatggatcttctacaaaaggaa
accatggggaaaaagtttgagaagctgaatatcgccgtgctcactaacctcaacacgccg
gcctgcgcagatcagctggacatcattattggcaatttaaagaaagctggcattaccctg
cagttctttctgccattccctgtggatgcagatgaaggggctgctggagatggagacaga
ccaggtccgaggcctccgacccagcttggaaaaggcctgagcagggagcagaagaagggg
ctggagatggtcaggcaggtcatgacctctctggatgaagaagatggcctggacgacgtc
tacactttcagcgatgctgtggagaagctgtccatgtttaagcgaatcgagagacggccg
acggcgtggtcctgtctgcttactattggaagctccctgtccatccgcattaacggatac
aaaacggtgtgtgaggagaagattaagaagacctgggccatagtagatgctgagagtcac
cagaaagatgatgtaaagagggacacagtctactgcctcaacgatgacaatgagactgaa
gtgcagaaagatgatgtcattcagggtttccgttacgggagtgacattgtcccgttctcc
aaagtggaccaagagcagatgaagtacaagtccgatggaaaaagctttgctgtgcttggc
tttaccaagcaggagctgattcatcgccatcatttcatgggccagcagattgttaaggtt
tttgctgctaaagatgatgagcatgcagctgttgcgctctccgctctgattcaagctctg
gacagtctgaagatggtggctattgttcgttatatttatgaccgccgctgcaacccacaa
gtaggagcagcttttccttgcgtcaaagacaaatacgagtgcttggtgtatgtgcagcta
ccgtacatggaggacctccgtcagttcgctttcccttcactggagaacaacaagaaattt
gttccatcagaggctcagctgtcagcagtggacaatctcatcaacgctatgatgctggtg
gaggagggtgaagatggagagaaggaggatatattcaaagtcaacaaaatccccaaccca
caatttcagagactcttccagtgcctacaccatcgtggggtgaacccaggtgcacccctg
ccccctatggagccgtggctcaagcggatgctggatcggccccaggctgtctctgcccgc
tgccgtgcacctctgcaggagatgaagaaactcttcagcctgaaggaggtggtgcaaaag
aagggccagaagaccagtgcggatgtgtttgggaatagcactgaagagccagacgcaaag
aagttcaaagtggatgaaggggagaagttcagcctagcagagacttcagagggaaacatt
acctctgtaggtagcgtgaaccctgcagaaaacttccgcactttagttcaaaagaagacc
attccctttgaccaagcgtgcgagcagctcacccacaggatggagcagttgctgggcaac
aggagcaccgactattacatgaagaccatcgcatgtgtccaggcctttagggagcagtcc
attaaggtatcaaatgcggagcttttcaacagctacatgcagtctctgaagaacagcgtt
ccagagaagaatcttcaggcattctgggacctgctcgttgcagattctataacactgatc
agcaaggatgaagtggatagcagcacagtatccaagcaagaggcaaaccagtttctggca
tttgaagagaaagaagaagtggcagccgctccctcccacgaggacgcaggagacgtggat
gatttgctggacatgatgtga
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