Ictalurus furcatus (blue catfish): 128609121
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Entry
128609121 CDS
T09387
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128609121 (sox1a)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128609121 (sox1a)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128609121
NCBI-ProteinID:
XP_053483491
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Position
6:complement(29263968..29267358)
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AA seq
345 aa
AA seq
DB search
MYSMMMETDLHSPVPQTNTNPGQTGPNSGNKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAATGAGVGLGVSMSAAGVGQRLESPGGHGGSAGAGYSHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYGQHPGTGAHHHHHPHAHHHHPHNPQPMHRYDMSALQYSPISS
SQSYMSASPPGYGGISYSQHQNAGVASSAAIGTLSSLVKSEPNVSPPVSTHSRGPCQGDL
REMISMYLPAGESGEPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacttgcactccccggtaccccagaccaatacaaac
ccggggcagacaggtccgaactcggggaacaaagccaaccaagagcgcgtcaaacgccct
atgaatgcttttatggtgtggtcccgcggccagcgccggaaaatggctcaggaaaatccg
aaaatgcacaactctgagatcagcaagagactcggcgcagagtggaaggtgatgtcagaa
gctgaaaagcggcccttcatcgacgaggcaaaaaggctgcgcgccatgcacatgaaagag
catccggattacaaataccgaccgaggcgcaaaaccaagacactgcttaaaaaggacaag
tactctctggctggcggtctgctcggcggagcggccacgggcgcgggagttggcctcggg
gtgagcatgagtgcagccggtgtaggccagaggttagaaagccccgggggtcacggaggc
tcagccggcgctggttactcgcacatgaacggttgggcaaacggcgcgtattcgggccag
gtggctgccgccgccgccgctgctgctatgatgcaggaggcgcagctcgcgtatgggcag
caccctggcactggcgcacatcaccaccatcacccccatgcccaccaccatcatccgcac
aacccgcagccaatgcaccgctacgacatgagcgctctgcagtacagccctatatccagt
tcacagagttacatgagcgcgtcgccgcccggctatggagggatttcctattcgcagcac
caaaacgcgggtgttgcgtcgtcggccgccatcggcacgctgagctctttggtcaagtcc
gagcctaacgtaagtcctccagttagcacgcactccagaggcccgtgccagggagacttg
agggagatgattagcatgtatttaccggctggagagtccggagaaccgtccgttcagagc
agactgcacgctttaccgcaacactatcagagcacgacggccggagtaaacgggactgtc
ccgctcacgcacatttga
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