Ictalurus furcatus (blue catfish): 128609147
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Entry
128609147 CDS
T09387
Symbol
trim45
Name
(RefSeq) tripartite motif-containing protein 45
KO
K12021
tripartite motif-containing protein 45
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128609147 (trim45)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128609147 (trim45)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
RING_XB3-XBAT31
Ig_GEX2_N
zf-C3HC4_4
zf-C3HC4_3
CENP-F_leu_zip
Y_Y_Y
Apolipoprotein
CBM13-like
Motif
Other DBs
NCBI-GeneID:
128609147
NCBI-ProteinID:
XP_053483540
LinkDB
All DBs
Position
6:complement(29913199..29921175)
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AA seq
575 aa
AA seq
DB search
MSAGEEKSATDIGMNKKSIKGAVSNSRAFCRVCKRMYREPKLLSCLHTFCADCIRQLEPF
SPLSGQPESPARAPERPRSLTVLCPECDSEVELPSSGVDGLTTDHLALDEVFMETLLLDQ
RAVCDLCGDAEAEQRCQVCSLNLCDFCSQAHRRQKRTSSHAIHSLEELKRQGRLSRPVLC
SLHSGQELRRFCETCDLTVCLECAATFHRDHRCSPMHEVIHQHGDRIRELVSRSLRPRLF
RLEEALKCVEVSQEALQSRAEGMAREIQAFARAYTSAVETHCRSLLHSLEDLRLQKHNQL
QLQRAQLEQALCDVRGSVDFAERLLTCGSEAEILSVKGVTTRRLMSLLELGYDPHMTSVS
HDSGGSICFLPQGLAGQVEGFPMVGVLQAKTVDPSKCTVQGEGVHRCVEGQKCEFTLVCR
DSAGELMGKGGDSVLVSIIHTEKKACKVEATVIDNNDGSYAVSYTPTEPGSYSLWVCVKA
QHVKGSPFGLTVKRKFQRHHGIFHCCSFCSSGGAKKAQCGCPGTMPGGFQGCGHGHKGHP
GKPHWSCCGSVLESSECVRSLVSGSHRGHVRTVDL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctggcgaggaaaaatctgcgacagacatcggaatgaacaaaaagtcgattaaa
ggggctgttagcaactccagagcgttttgtcgggtctgtaagcgcatgtatcgggaaccc
aaactcctctcctgcttgcacacgttttgcgcggactgtatccgccagctggagccgttc
tccccgctgagcggacagcctgagagtccggcccgagccccagagcggccgcggtccctc
acagtgctgtgtcccgagtgcgacagtgaggtggagctgccgagctccggggtggacgga
ctcaccacagaccacctggcgctggacgaggtgttcatggagacgctgctgctggatcaa
cgcgccgtgtgcgacctgtgcggagacgccgaggccgagcagcgctgtcaggtgtgcagc
ctcaacctgtgcgacttctgcagccaggcacacaggagacaaaagaggacatccagtcat
gccatccacagcctggaagagctgaagcgtcagggccgtctctccagacccgtgctgtgt
tctctgcactcaggccaggagttgcgtcgcttctgtgagacctgcgatctcactgtttgt
ctggaatgtgccgccacgtttcacagagaccatcgctgcagtcccatgcatgaggtcata
catcagcatggcgaccgtatccgggagctggtttccaggagcctgcggcctcgcctcttt
cgtctggaggaggcactgaagtgcgtggaggtttcccaggaggctttgcagtctcgggca
gaagggatggcgagggagatccaagcctttgcgcgagcctacactagtgctgtggaaact
cactgccgttctcttctgcactccctggaggatctgagattacagaagcacaatcagctc
caactccaaagggcgcagctggagcaggcgctgtgcgacgtccgcggcagcgtggacttt
gctgaacgcttgctcacatgtggctcggaggcagagatcctcagtgtgaagggcgtaacc
acgaggcggttaatgagcctgttggagttggggtacgatccacacatgaccagcgtgagc
catgacagtggtggcagtatctgtttcttaccacaagggcttgcagggcaggtggaggga
tttcccatggtaggagttctgcaggccaagactgtagatcccagcaagtgcaccgttcaa
ggagaaggtgtccatcggtgtgttgagggccagaagtgtgagttcacactcgtctgcagg
gactctgcaggggagctgatgggcaaaggaggagactctgtgctagtcagcatcatccac
acagaaaagaaagcatgcaaagtggaggcgacagtgatcgataataacgatgggtcgtac
gcggtctcctacacgcccacggaacctggatcctactctctgtgggtgtgtgtcaaagca
cagcatgttaagggctcaccttttgggctgacggtgaagagaaaatttcagcgccaccat
ggcatcttccactgctgctccttctgctccagtggaggtgctaaaaaggcacagtgtggc
tgccctgggaccatgccaggagggttccagggctgtggtcatggccataaaggtcaccca
gggaagccacactggtcttgctgtggtagtgtgctggagagctctgagtgcgtgcgcagt
ctcgtgtcaggctctcaccgtggacacgtccgaactgtggacctctga
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