Ictalurus furcatus (blue catfish): 128609224
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Entry
128609224 CDS
T09387
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128609224 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128609224 (hspd1)
03110 Chaperones and folding catalysts [BR:
ifu03110
]
128609224 (hspd1)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128609224 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128609224 (hspd1)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
128609224 (hspd1)
Messenger RNA biogenesis [BR:
ifu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
128609224 (hspd1)
Chaperones and folding catalysts [BR:
ifu03110
]
Heat shock proteins
HSP60 / Chaperonin
128609224 (hspd1)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
128609224 (hspd1)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128609224 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
128609224 (hspd1)
Exosomal proteins of breast cancer cells
128609224 (hspd1)
Exosomal proteins of colorectal cancer cells
128609224 (hspd1)
Exosomal proteins of bladder cancer cells
128609224 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
128609224
NCBI-ProteinID:
XP_053483681
LinkDB
All DBs
Position
6:32146547..32151817
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AA seq
575 aa
AA seq
DB search
MLRLPSVMRQMRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPIEIRRGVMLAVETVINELKKLSKPVTTPEEIAQVATISANGDT
EIGTIISDAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAIATGGTVFGDEAVGLAVEDIQAHDFGRVGEVVVTKDDTMLLKG
HGDPAAIEKRTIEIAEQLDTTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDTIKPINEDQKIGIDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQSGSEIGYDALLGEYVNMVERGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTELPKEEKEMPGGMGGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcttgcccagtgtgatgaggcagatgaggccggtgtgcagggcccttgctcca
cacctcacccgggcctatgccaaggacgtgaagtttggagctgatgcccgggcgctcatg
ctccaaggagtggaccttttggcagatgccgtggctgtcactatgggaccaaagggtcgc
acagttatcatcgagcagagctggggcagcccaaaggtcaccaaagatggcgtcacagtt
gccaaaagcattgaccttaaagacaagtacaagaacatcggggcgaggttggtgcaggat
gtggctaataacacaaacgaggaagcgggtgacggcaccaccaccgccactgtactggca
cgggccattgccaaggagggcttcgataccatcagcaaaggtgccaaccccatagagatc
cgcagaggagtcatgctcgctgtggaaacggtcatcaatgagctcaagaagctgtccaaa
ccagtcactacacctgaggaaattgctcaggtggccactatttctgccaacggagacacc
gaaatcggtacgatcatttccgacgccatgaagaaagtaggacgtaaaggagtgatcact
gtaaaggatggcaaaactctgcacgacgagctggagatcattgaaggcatgaagtttgac
cgtggctacatctccccctactttatcaacacggctaaaggtcagaagtgcgagttccag
gatgcctacgtgcttctgagtgagaagaagatatccagcgttcagagcattgtgccagcc
ctggagattgccaaccagcaccgtaaacccctggtcattgtggctgaggatgtagatggg
gaggcccttagcacgcttgtcctcaacaggttgaaggttgggctgcaggttgtggcggta
aaggcaccagggttcggagacaacaggaagaaccagcttagagacatggcgattgctact
ggaggaaccgtgtttggcgacgaggctgtcggcctggccgtcgaggacatacaggcgcat
gactttggccgtgtgggcgaggtggtcgtgaccaaggatgacaccatgctcctgaagggc
cacggagacccagctgccatcgagaagcgtaccatcgagatcgccgagcagctggatacc
accaccagcgattacgagaaggagaagctcaacgagcgcctggccaagctctctgacgga
gtggctgtactgaaggtcggtggaacgagcgacgtggaggtgaacgagaagaaagacaga
gtgaccgacgctctgaacgccactagggctgctgtcgaagagggcattgttcccggaggt
ggctgcgctctcctgcgctgcatccctgccctggacaccatcaaacccatcaacgaggac
cagaagatcggtatcgacatcatccgcagagcactgcgcatccctgccatgaccatcgct
aagaacgcaggagtggagggttctctggtggtggaaaaaatcctgcagagtggctcggag
atcggctacgacgcccttctcggcgagtacgtcaacatggtggaacgaggaatcatcgac
cctacgaaggtggtaaggacagcactgctggacgctgctggcgttgcatccctgctctcg
acggcggaggccgtggttacagagttgcctaaggaggagaaggaaatgcccggaggaatg
ggaggtggcatgggcggaatgggtggtatgggtggaatgggcttctaa
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