Ictalurus furcatus (blue catfish): 128609246
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Entry
128609246 CDS
T09387
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128609246 (tbc1d4)
Membrane trafficking [BR:
ifu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128609246 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128609246 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128609246 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
DUF4249
Motif
Other DBs
NCBI-GeneID:
128609246
NCBI-ProteinID:
XP_053483713
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All DBs
Position
6:complement(33163084..33196790)
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AA seq
1206 aa
AA seq
DB search
MEGAEDKGRGRGKEKIFSLWYVGCSALDRRTTLPMLPWLVAEIRRKSESGPVQARLVQLS
LTPPMIRCVPASSSSASVFIFEHKAQCISRFVHNSHDLAYFAYLIRCQPDDPEGEMVCHV
FKACDPDQVSEVISSIRQTSKSALKEENKPRQEAEESFYNSQKFEVLYCGKVTVNHKKAS
STLIDDCIDLFREHESERRRLRLLNGQRSVETPVVFSVGDDPLNASLSEAALTEINEKAG
GMRGAFPECIQEDSGFEQQEFRTRCSSLAGGLQKIPRETGAQVQTRRRHASAPNNVQPSD
ADKNRTMLFQVGRFEVNLISPDSKTVVLEKNFKDISFCSQGVKQTDHFGFICRDVLESGP
SQYTCYVFQCASESLVDEVMLTLKQAFSTAAALQSSKTQIKLCEACPMHDLHKLCERIEG
LYPPRAKLAIQKYLSLLSDNEQADIFERVQKMKPSCDQEENELVILHLRHLCETKQKTHA
HIGEAPQNAVGSESSSAAGRNKLDVLKNKARSSLTSSLENIISRGANRMRMRLGSMGSFD
RQDESPGDSPPGTPPATLDEDPDAPLFRRRAHTFSHPPIKKRISFTELPTQNKVPLHRQQ
SLAPELLQSSPVRVPRKRSVSEGESSFNLPSSFSTSTFLKSFYLGSISSLASLPDSPKSN
GEDRNRRLSGCSTDSVSAVTTRRVSWRQKIFLRVASPINKASASMHKADMDGSELLPLSP
RALQQEQDTLSGLLSSTQSLRGENGRRTTADYRALWKKAIHQQILLIRMEKENQRLEASR
DELHIRKMKLDYQEVGECPTEVQALWEKKLNVPCRTKVQWDKDQIHSALCQGVPKSRRGE
VWLLLSQLYRLRHRLPQRQQPPDTSYQDLLKQLTTQQHAILVDLGRTFPTHQYFSAQLGA
GQLSLYNLLKAYSLLDTEVGYCQGISFVAGVLLLHMSEEQAFDTLKFLMYDLGLRRQYRP
DMISLQIQMYQLSRLLHDYHRGLYSHLEEHEISPSLYAAPWFLTLFASQFPLGFVSRIFD
LLFVQGTEVIFKVALCLLSNHEGEILECDSFESIVDYLKTTIPTLRQNQMEETITKALEM
DISKQLHAYEVEYHVLQDEMVDAAPLSEESDRLERLEKTNAQLKKQNMDLLEKLQAARVK
IQSLENSVESFLVRESQMKHMIRSLEQEKANYQKTIERMRSSLPADAADVEMTPLKMNSK
TKAADK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagcggaggacaaagggagagggagagggaaggagaagatcttctcgctgtgg
tatgtgggctgcagcgcgctggaccggcgcaccacgctgcccatgctgccgtggctggtg
gccgaaatccgcaggaagagcgagtccggtccggttcaggctcggctcgtccagctctcc
ctcacccccccgatgatccgctgcgtgcccgccagcagcagcagcgcgtccgtctttatc
ttcgagcacaaggcgcagtgcatctcgcgcttcgtgcacaacagccatgacctcgcctac
ttcgcctacctcatccgctgtcagccggacgacccggagggcgagatggtctgccatgtg
ttcaaggcgtgcgacccagaccaggtgtccgaggtcatcagcagcatccggcagacctcc
aaaagtgcactcaaagaggaaaacaaacccaggcaggaggctgaggagtccttttacaac
tcgcaaaagtttgaggtgctttactgtggcaaggtgaccgtgaaccacaaaaaagcatcc
tccaccctgatcgacgactgcatcgacctgtttcgggagcacgagtccgagcgcagacgt
ctgcggctcctgaacggccagcgctctgtggagaccccggtggtcttcagcgtgggagac
gacccgctcaacgcatcgctgtctgaagctgcgctcacagagataaatgagaaagcaggc
ggtatgcgcggcgccttccccgagtgcatccaggaggactcgggctttgagcagcaggag
ttccgcactcgctgcagcagcttggcaggtggcttacagaagatccctagagaaacagga
gcccaagtgcaaacgcgtaggagacatgctagcgcacctaacaacgttcagccctctgat
gcagacaagaaccgcaccatgttgtttcaggtgggacggttcgaggtgaatctcatcagc
cccgacagcaagacggtagtgctggagaagaatttcaaagatatctcgttttgctcccag
ggagtgaagcagacggaccactttgggttcatctgtcgtgacgtgttggagtcggggccc
agccagtacacgtgctacgtgttccagtgtgccagtgagtctctggtggatgaggtgatg
ctgactctgaagcaggccttcagtacagctgcagcactgcagagctccaaaacccagatc
aagctatgtgaggcctgtccgatgcacgacctgcacaagctttgcgagcgcatcgaagga
ctgtaccctcccagagcaaagctggccattcaaaaatacctctccctgctgagcgataac
gagcaggccgacattttcgaacgcgtgcagaagatgaagccaagttgcgatcaggaggag
aatgagctggttattcttcacctcaggcacctgtgtgagaccaagcagaagacgcatgcg
cacatcggagaggctcctcagaacgcagtaggttccgagagctcaagtgcagctggacgc
aacaagctggacgtgctgaagaataaagcacgcagctccctcaccagctccctggagaac
atcatttcacggggtgcaaaccggatgcgcatgcgtctaggaagcatgggcagctttgac
cgacaagacgagtctcccggtgattctcctccagggactcctcccgctaccttggatgag
gacccggacgcccctctgttccggcgccgtgcacacaccttcagccaccctccaatcaag
aagaggatctctttcaccgagttaccgacccagaacaaggttcctttgcacagacagcag
tctcttgctccagagctgttgcagagcagcccggtgcgtgtaccaagaaaacgcagtgtc
tctgagggcgagtcttccttcaaccttccctcctccttctccacttccactttcctgaaa
agtttttacctgggctccatcagctcactggcctccctgccggacagccccaagagtaat
ggggaggacagaaacaggaggctgtccggctgcagcactgactcggtgtctgcagtgact
acacgcagagtgtcttggcgtcagaagattttcctgagggtggcttcacccataaacaaa
gcctcagcctcgatgcacaaggctgatatggacggcagtgagctgctgccgctttctccc
cgtgccttacaacaggagcaggacaccctatctgggctgctctcctccactcagagcctg
agaggagaaaatggacgccgcactactgctgattatagagctctgtggaagaaggccatc
caccaacagattctcctcatccgcatggagaaggagaaccagcgcctggaggccagccga
gatgagctacacatccgtaagatgaaactggattaccaggaggtgggcgagtgtcctacg
gaggtgcaggctctgtgggagaaaaagctgaacgtgccttgcaggaccaaagtgcagtgg
gacaaagaccagatccactctgctctctgccagggtgtcccaaaaagtcggcgaggtgag
gtgtggctgctcctctctcagctgtatcgcctgcgtcatcgtctacctcagcggcagcag
cctcctgatacgtcctaccaggacctgctcaagcagctcaccacacagcagcacgccatc
ctggtggacctggggcgcacattccccacgcaccagtacttcagcgcacagctgggcgca
ggccagctgtctctctataacctactgaaggcctactctctactggacacggaggtgggc
tactgccagggcatcagctttgtggctggagtgctgctgctgcacatgagcgaggagcag
gccttcgacacgctgaagttcctgatgtacgacctggggctccggcgccagtaccggcct
gacatgatctccctgcagattcagatgtaccagctgtcccggctgctgcatgactaccac
cgtggtctgtattcgcacctggaggagcatgagatcagccccagcctgtacgctgctcct
tggttcctcacgctcttcgcctcccagttccccctcggcttcgtctcgcgcatcttcgac
ctgctatttgtccagggcacagaggtgatttttaaggtggccctgtgtttgctgagcaac
catgagggagagatactggagtgtgacagctttgagagcattgtagactaccttaagacc
accattcccaccctcaggcagaaccagatggaagagacaatcaccaaggctttagagatg
gacatctccaagcagctgcacgcgtatgaggtggagtaccacgtcctgcaggacgagatg
gtggacgccgcgccactttcagaggaatcagacaggctggagagactcgagaagaccaac
gctcagctgaagaagcaaaacatggatctgctagagaaactgcaggctgcacgggtgaaa
atccagagtctagagaacagtgtagagagcttcctggtacgcgagagccagatgaagcac
atgatccgctcgctggagcaggagaaggccaactaccagaagaccatagagcgcatgcgc
agcagcctcccggcagacgcagctgacgtggagatgaccccgctgaagatgaacagcaaa
accaaagcagccgacaaataa
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integrated database retrieval system
