Ictalurus furcatus (blue catfish): 128609260
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Entry
128609260 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128609260
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128609260
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
U-box
zf-RING_5
zf-RING_2
zf-Nse
JetA
Prok-RING_4
zf-RING_10
Perilipin
S_2TMBeta
DUF4200
Motif
Other DBs
NCBI-GeneID:
128609260
NCBI-ProteinID:
XP_053483742
LinkDB
All DBs
Position
6:33390626..33394675
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AA seq
470 aa
AA seq
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MASKFSEEDFSCPVCCEIFMDPVLLRCSHSVCKVCLQKFWETKGSRECPVCRRKSSMGEP
PTCLALKNLCETFLQERSQRSSSASETVCSLHSEKLKLFCLDDQQPVCVVCRDSKIHTNH
KFSPIDEALTDCKEELKTALKPLQDKLKIFKDCKLNWSQTAEHIKIQAQHTERQIKEEFE
KLHQLLRDEEAARIAALREEEEQKSQMMKEKIEKLSRDISSLSDTIRGVEEEMRAEDVSF
LQNYKATVRRAQCTLQHPEELSGPLIHVAKHLDNLKFRVWEKIQDAVQYTPVTLDPNTAH
PNLIVSDDLTSVRLSEQEQELPDNPERFDDYLCILGSEVFNSGTHCWDVEVGDCTWWDVG
VMTESAQRKGNIFSRSGIWCVGYTDGKYGTRSTPQPDTLLSVTQKFQRIRVQLDWNRGKL
SFSEPLTNTHIHTFTHTFTDKLLPFIWFACNKSPVKILPLQCSVRVNQIS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaagttttcagaggaggatttctcttgtcctgtgtgctgtgaaatcttcatg
gatcctgttctcctgcgctgcagtcacagtgtgtgtaaagtgtgtttgcagaagttctgg
gagaccaaaggatccagagaatgtcctgtttgtaggaggaagtcgtctatgggagaacct
cccacatgtttggccttaaagaacctgtgtgagactttcttacaggagagaagtcagaga
tcttcatcagcgtctgaaacagtctgcagtctgcacagtgagaaactcaaactcttctgt
ctggatgatcaacagccggtgtgtgtggtgtgtcgggattcaaaaatacacaccaaccat
aaattctctcccattgatgaggcattaacagactgtaaggaggagctgaaaactgctctg
aagcccctacaggacaaactgaagatctttaaagactgtaaactgaactggagtcagact
gcagaacatataaagattcaggcccaacacacagagcggcagattaaggaggagtttgag
aagcttcaccagcttctacgagatgaagaggcagccaggatagctgcactgagagaggaa
gaggagcagaagagtcagatgatgaaggagaagattgagaagctgagcagagacatatca
tctctttcagacacaatcagaggcgtagaagaggagatgagagctgaagacgtctcgttc
ttacaaaactacaaggccacagtgagaagagctcagtgcacactgcagcatccagaggag
ctttcaggaccactgatccatgtggcaaaacatctggacaacctgaagttcagagtctgg
gagaagattcaggatgctgtccaatacacacctgtaacgctggaccccaacactgctcat
cctaacctcattgtatctgatgatctgaccagtgtgagactcagtgagcaggaacaggag
cttcctgataatccagagagatttgatgattatttgtgtatcctgggctctgaggtcttt
aactcagggacacactgctgggatgttgaagtaggagactgtacatggtgggatgtgggt
gtgatgacagaatctgctcagaggaagggaaacatattctccagaagtggaatctggtgt
gtggggtatactgatggtaaatatggaacacgttctacaccacagccagacactctcctc
tcagtaacacagaagttccagaggatcagagtgcagctggactggaacagaggaaagctg
tcgttctctgaacctctcactaacacacacatacacactttcacacacacatttactgat
aaattactgccatttatatggtttgcttgtaataaatctcctgtaaagatcctccccctt
cagtgctctgtaagagtaaatcagatcagttag
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