Ictalurus furcatus (blue catfish): 128609308
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Entry
128609308 CDS
T09387
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128609308 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ifu04050
]
128609308 (edar)
Cytokine receptors [BR:
ifu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
128609308 (edar)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
128609308
NCBI-ProteinID:
XP_053483817
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All DBs
Position
6:34256540..34300601
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AA seq
463 aa
AA seq
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MARKIPRVESCLLSFLLASSVYPLRAEYSSCGENEFYNHSSSSCRPCPQCQPGQEPYMNC
GYGVKDEDYDCVSCPPGKFSRGKYEICRRHKDCNALYKATVLTPGTRESDAECGACLPGY
FILENRLRNIYSMMCHSCQNAPRNTKECMRTTSTSTKHVPGIPSTSTTTFPHAQKDPTGQ
GHLATALIIAMSTIFIMAIAIVMIIMFYILKAKTSGQACCSGQIVKTIEAPMNKQEEKKE
AQENAVIFTEKDEFKPPPTKAVKSENDASSENEQLLSRSIDSDEEAAQEKQGATDLCLLS
LVHLTRDKTCSNNTVSTTVNNNNNNCSNNSRTMGIHSRRKKILELYAKACGVAEGVSPVE
LPFDCLERTSRMLSTTYSAEKALVRTWRHLAESFGLKRDEIGGMTDGMQLFDRVSTAGYS
IPDLLARLVQIERLDVVEALCFDILGAPPSGQHLTISSRCASV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcccggaaaataccaagggtcgaatcttgtctcctttcatttctattggcctccagt
gtgtatcctctgagggccgaatactccagctgtggagaaaatgagttttataaccacagc
agcagcagctgtcggccgtgtccacagtgccaaccgggacaggaaccatacatgaactgc
ggctacggtgttaaggatgaagactatgactgtgtgtcgtgtcctccggggaaattctcc
aggggaaaatatgagatctgtcgtcgtcataaagactgtaacgcgctgtacaaagccacg
gtgctgacgccgggtacgagggagagcgacgccgagtgtggagcctgtttacccgggtac
ttcatcttggaaaatcgtctgagaaacatctacagcatgatgtgtcattcctgtcagaac
gctccacgcaacaccaaagagtgtatgcgaacgacatccacttccacgaagcatgtcccg
ggaataccgtccaccagcaccaccacgttccctcatgcccaaaaagatccaacagggcag
ggtcacctagcaacagccctcatcatcgccatgtcaaccatcttcatcatggccatcgcc
atagtgatgatcatcatgttttacatcctgaaagctaagacgagcggccaagcatgctgt
tccggtcagattgtgaagaccatagaagctccgatgaacaagcaggaggagaagaaagaa
gctcaagagaatgctgtaatattcacagagaaggacgagttcaagcctcctccaacaaag
gcagtaaaaagtgaaaatgacgcgtcgtccgagaacgagcagctgctgagccgcagcatc
gacagcgatgaagaagcggcgcaggagaaacaaggagccaccgatctgtgccttttatct
ctcgttcatctcacccgagacaagacctgctcaaacaacaccgtcagcaccaccgtcaac
aacaacaacaacaactgcagcaacaacagcagaactatggggattcacagtcgaaggaaa
aaaatcctggagttgtacgccaaagcgtgcggtgttgccgagggtgtgagtccggtcgag
ttgccctttgactgcctggagcgaacgagccgcatgctgagcaccacctacagcgcggag
aaggcgttagtcaggacgtggcgtcacctggccgagagcttcggattaaaacgtgacgaa
atcggaggaatgacagacggcatgcagctcttcgaccgtgtcagcacggctggctacagc
atcccggacctgctagctcgactcgtccagatcgagaggttggatgtggtcgaagcacta
tgcttcgatattctcggagcgcccccttctggccagcatctgacgatttcttcacgttgc
gctagcgtttga
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