Ictalurus furcatus (blue catfish): 128609334
Help
Entry
128609334 CDS
T09387
Name
(RefSeq) high-affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128609334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128609334
Transporters [BR:
ifu02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
128609334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
128609334
NCBI-ProteinID:
XP_053483842
LinkDB
All DBs
Position
6:5942294..5954289
Genome browser
AA seq
589 aa
AA seq
DB search
MAIHVEGLLAIALFYLLILFVGIWAAWKNKNSGVGDSTVQSESIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEHVYLPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQLYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDININMSVILSALIAIFYTLV
GGLYSVAYTDVVQLFCIFIGLWISVPFALANPAVSDISVTAVKKVFQTPWLGKIHSSDGW
MWADNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLIMALPSILIGAIGAST
DWNQTSYGSVPPTDKDESDMILPIVLQHLCPPFISFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLAFRQSASDQEIVWVMRITIFVFGALATAMALLTGTVYGLWYLSSDLVYIIIF
PQLISVLFVKGTNTYGSVAGYIFGLFLRIGGGEPYLKLPPFIYYPGWDEEEKVHHLTKEV
EHVVVQKFPFKTVAMLASLLGNAVFSYTAKYLFESGTLSPRYDFLNAVVAKHSKEIMDKT
ILVSNDNIILSEMAPVKPRTASSLAGTFMNPEVLIDEKEISAELNNECE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccatccatgtggaaggactgctggcgatcgcgctcttttatctgctcatcttattt
gttggaatttgggcggcttggaaaaacaaaaactctggggttggagacagtacagtccag
agtgagtctataatggtgggaggacgggacattggactctttgtcggtggatttactatg
accgccacttgggttggtggtggatatatcaatggaacagcagagcatgtgtatttgcct
ggctatggactggcatgggcacaggcaccctttggttatgcacttagcttggtagtaggt
ggtctattctttgccaagccaatgcggtccaggggatatgtaaccatgctcgatcccttt
cagcagctttatgggaagagaatgggtggccttctctttataccagccttgatgggagaa
atcttctggtcagcagccattttgtcagcactgggtgccaccttaagtgtcatagtggat
atcaacatcaacatgtctgttatattatcagcgctgattgccatcttctacacactggtg
ggcgggctatactcagtggcgtacacggatgtggttcaacttttctgcatttttataggc
ttgtggatcagtgtaccttttgctttagctaaccctgcagtgtcagacatcagtgtgaca
gcagtgaaaaaagtatttcagaccccgtggctaggcaaaattcattcttcagatggttgg
atgtgggcagataacttttgccttctgatgttgggggggattccctggcaggtctatttt
caacgcgttctttctgcttcttcagctacttacgcccaagtcctctcgttcctggctgcc
ttcggctgcctcattatggcgctcccttccattctaattggagccataggggcatctaca
gactggaaccagacatcatatggctctgtgccaccgacagacaaagatgaatcagacatg
attctgcctattgtgcttcaacatctttgcccacctttcatctcgttcttcggcttgggg
gccgtttcagccgctgtgatgtcatcagcagattcgtccattctttcagcaagttcaatg
tttgcgcgcaacatctaccagcttgctttccgtcagtcggcatctgaccaagaaattgtc
tgggtgatgcgaatcacaatcttcgtgtttggtgctttggccacagccatggcactcctg
actggaacggtttacggcctgtggtacttgagctcggatcttgtctatattatcatcttt
cctcagctaattagcgtactcttcgttaagggaaccaatacttatggttcagtagccggc
tacatctttggcttgtttctgagaatcggtggtggagaaccctacctcaagcttccgcct
ttcatctactacccaggttgggatgaagaagagaaggtgcaccatctgaccaaagaggtg
gagcatgttgtggtgcagaagttccctttcaagactgtagccatgctagcttcacttttg
ggcaatgctgtcttctcttacacagcaaagtatctctttgagagcggcacactctctccc
aggtatgactttttgaatgctgtggttgccaaacacagcaaagaaatcatggacaagaca
attcttgtaagcaatgacaacatcatcctgtcagaaatggctccagttaaaccaaggact
gcatcctccttggcaggaacattcatgaacccagaggtgcttatcgatgaaaaagaaatc
agtgcagaactgaataatgaatgtgaatag
DBGET
integrated database retrieval system
