Ictalurus furcatus (blue catfish): 128609356
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Entry
128609356 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128609356
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128609356
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-C3HC4_4
zf-RING_5
zf-RING_2
Prok-RING_4
U-box
zf-RING_6
zf-RING_4
E_raikovi_mat
DUF6845
zf-Nse
Motif
Other DBs
NCBI-GeneID:
128609356
NCBI-ProteinID:
XP_053483863
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All DBs
Position
6:14729381..14731871
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AA seq
472 aa
AA seq
DB search
MATKFSEEDFSCPVCHDIYKDPVVLQCSHSMCKVCLEKSWEAKGSRECPLCRRRSSIPDP
PRNLALKNLCETLLQEKNPSSSPASETVCSLRSEKLFSLDDKHSVCVINQDSGKHNEHKI
CPTNETVTDCKEELKTALKLLQEKLKIFKDCNLNWSRTAEHIKIQAQHTERQIKEEFEKF
HQFLRDEEAVRIAALRDEEEQKSQMMKEKIENLSRDISSLLDTIRVIEEEMRAEDVSFLQ
NYEATVKRAQCTLQHPEELSGALIHVAKHLANLKFRVWEKMQDIVQYTPVTLDPNTAHSN
LIVSDDLTTVRRNVKKQELPDNQERFDEFECILGSEGFNSGTHCWDVEVGGCKQWSLGVM
TESAQKKGDIFNRIGIWFMWCKNGKHAVCSTPHPTTPISIPQELERIRVQLDWERGKLSL
SNPITNTDIYTFTHTFTEKLLPFLANTYKENSLKILPLHCSVSVNQLELVQK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctactaagttttcagaggaggatttctcctgtcctgtgtgccatgatatctacaag
gatcctgttgtcctgcaatgcagtcacagtatgtgtaaagtgtgtttagagaagtcctgg
gaagccaaaggatccagagaatgtcctctttgtaggaggaggtcgtctatacctgatcca
cccagaaatctggccttaaagaacctgtgtgagactctcttacaggagaaaaatccgagt
tcttcaccagcgtctgaaacagtctgcagtctgcgcagtgagaaactcttcagtctggat
gataagcactcggtgtgtgtgataaatcaggattcaggaaaacacaatgagcacaaaatc
tgccccactaatgagacagtaactgactgtaaggaggagctcaaaactgcactgaagctc
ctacaggagaaactgaagatctttaaagactgtaatctgaactggagtcggactgcagaa
catataaagattcaggcccaacacacagagcggcagattaaggaggagtttgagaagttt
caccagtttctacgagatgaagaggcagtcaggatcgctgcactgagagatgaagaggag
cagaagagtcaaatgatgaaggagaagattgagaatctgagcagagacatatcgtctctt
ttggacacaatcagagtcatagaagaggagatgagagctgaagacgtctctttcttacaa
aactatgaagccacagtgaaaagagctcagtgtacactgcagcatccagaggagctttca
ggagcactgatccatgtggcaaaacatctggccaacctgaagttcagagtctgggagaag
atgcaggacattgtccaatacacacctgtaactctggaccccaacactgctcattctaat
ctcattgtatctgatgatctgaccactgtgagacgcaatgttaagaaacaggagcttcct
gataatcaagagagatttgatgaatttgaatgtatcctgggctctgagggctttaattca
gggacacactgctgggatgttgaagttggaggctgtaaacagtggtcactgggtgtgatg
acagagtctgctcagaagaagggagatatatttaacagaattggaatctggtttatgtgg
tgtaagaacggcaaacatgcagtatgttctacaccacatccaaccactcccatctcaata
ccacaagaactcgagaggatcagagtgcagctggactgggagagaggaaagctgtcatta
tctaaccctattactaacacagacatatacacattcacacacacattcactgagaaatta
ctgccatttttagctaatacatataaagagaattctctgaagatcctcccacttcattgc
tctgtaagcgtgaatcagttagagctggttcagaaataa
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