Ictalurus furcatus (blue catfish): 128609505
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Entry
128609505 CDS
T09387
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128609505 (tnn)
04518 Integrin signaling
128609505 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128609505 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128609505 (tnn)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128609505 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
Fn3_Dep-1_3rd
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_2
Pur_ac_phosph_N
EGF_Tenascin
Interfer-bind
fn3_2
Fn3_Dep-1_2nd
SdrD_B
hEGF
EGF
DUF7949
Motif
Other DBs
NCBI-GeneID:
128609505
NCBI-ProteinID:
XP_053483961
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All DBs
Position
7:complement(5460503..5487486)
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AA seq
1014 aa
AA seq
DB search
MLPRLNWFWLPLFGMLGVVLLVTQAEESEKAVTFSHVYRFNSGCNQDLQAVLPSQDQASE
GQVMMVDGEKDIVFKHKIKFPSSSCNCADSEEFKDLLYRVNGLEEEVTYLKTQCAQGCCR
GSSGVDTSCSGHGVYQHNTCSCKCDAGWEGPDCSISICPDNCNNNGYCVDGRCVCHAGYT
GHDCGLLTCPDDCNDKGHCVDGKCVCFEGFSGDTCSMQKCPSDCKENGRCIDGKCHCDEG
FFGNDCSMVLGPKGLHVIRVTDVSLLVEWERVKKAEYYLLYYYPHGNEGAIQEIRVPNTE
NSYLITGLKPGVTYIVQVQAVIKGISSESDRITATTDLSGVEGVRVLGQTEDSIQVDWKN
PETEVDYFKLRHASPDGHEQLENVARSQEARTVHTIIGLNPGTEYQITVQAIKGSNEGKP
SHTTGVTDIDSTNYLVTRNVTETTVTVIWEKVRAEVDGYILTYSSAEGSSQEIQVGADAT
SYQLTSLKPGVLYTIFIRAYKGSRLSRNSSTEAETELDAPTNLLVREVTEDSAMVSWDRV
QAEIDGYILSYSSADGSSDEVQVGADSTSYQFTGLRPGVTYTVYVWAFKGTRSSRKTTTE
TETELDAPTNLLVREVTEDSAMVSWDRVQAEIDGYILRYSSADGSSDEVQVGADSTSYQF
TGLRPGVTYTVYVWAIKGSRSSRKTTTETETEIDAPKNLKAVDVKSDSAALTWTPPQAQI
DGYILSYRPEDGSMQTVEKNFVAGDTTISLSGLATGKKYVVTLIAYRGSKRSKVVETIFI
TVEAAYHFPMDCAQIMKNGKMKSGVYTIYVANDRNKPMQVYCDMTTDGGGWLVFQRRNTG
KLDFMKRWRQYMQGFGELTDEFWLGLENIHALTNTSTKYEVRFDLGLGSERAYAVYDDFK
VGSAKQKFKLTIGNYRGNAGDAMAYHQGRPFTTIDSDNDIALGNCAFTHHGAWWYKNCHL
ANLNGKFEDNRHSMGVNWEPWKGHLMSLDYTEIKIRPVNTASRKKRSLKRRAAA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccaggctaaattggttctggttgcccctgtttgggatgctgggtgtagtcttg
cttgttacacaagcagaagagtctgagaaagcagtcacatttagccatgtgtacaggttt
aactctggttgtaatcaggacttgcaggcagttttgccttcccaggaccaagcatcagag
ggtcaggtcatgatggtggatggggagaaggacattgttttcaagcacaaaattaagttt
ccctcgtctagttgcaactgcgctgattcagaggaattcaaagacctgctgtaccgtgtc
aatggtttggaggaggaggttacctacctgaagacccagtgtgctcagggctgctgcaga
ggaagctcaggtgtggacacaagctgtagtggccatggtgtataccaacacaacacatgc
agctgcaaatgtgatgcaggctgggagggtccagactgctccatctccatctgtccggat
aattgtaataataatggctactgtgtagatggacgatgcgtttgccatgctggttacacg
ggccatgactgtggcctgctcacatgtcctgatgactgcaatgacaagggccactgcgtg
gatggcaagtgtgtgtgttttgagggcttctctggagacacctgcagcatgcagaaatgc
ccaagtgactgcaaagagaacggccgctgcatcgacggaaagtgtcattgtgacgaggga
tttttcggaaatgactgctctatggtactgggtccaaaaggcctgcatgtgatcagggtg
actgatgtttccctgctggtggagtgggaacgtgtaaagaaagcagagtactacctgctc
tactactatcctcatggaaatgagggagccatccaggagatccgtgttcccaacactgaa
aattcctacttgatcacaggcctcaaacctggagttacctatatcgtgcaagtgcaggct
gtcatcaagggcatcagcagcgaatcggaccgcatcacagccacaacagatttatctggt
gtagaaggtgtccgtgtgcttggacagacagaggactctatccaggtggactggaagaac
ccagaaacagaggtggattactttaaactacgtcatgccagtccagacggccatgagcag
ctggaaaacgtagccaggagccaggaagctaggactgtgcacaccattataggtcttaac
ccaggcactgagtaccagataacagtgcaagccatcaaaggaagcaatgagggaaaacca
tcccatactacaggagtcacagacattgattctacgaattacctggtcactaggaacgta
accgagaccacagtgactgtgatatgggagaaggtccgtgctgaggttgatggctacata
ctgacctatagctctgctgaaggctccagccaggagatccaagttggggcagatgccact
tcctaccagctcacatcactgaaacctggggttctgtacaccatcttcatcagggcctac
aagggttctcgtttgagcaggaacagctctactgaggctgagacggaactagatgcacct
actaacctcttggtcagagaagtgacggaggactcagcgatggtgtcatgggacagagtc
caagcagaaatagatggctacatattgagctatagctctgctgatggctccagtgatgaa
gtgcaagtgggagcagacagcacttcctaccagttcactggtctgaggccaggagttaca
tatacagtctacgtctgggccttcaagggcactcgctccagcagaaaaactacaacagaa
actgagacagaactagatgcacctactaacctcttggtcagagaagtgacggaggactca
gcgatggtgtcatgggacagagtccaagcagaaatagatggctacatattgagatatagc
tctgctgatggctccagtgatgaagtgcaagtgggagcagacagcacttcctaccagttc
actggtctgaggccaggagttacatatacagtctacgtctgggccatcaagggctctcgc
tccagcagaaaaactacaacagaaactgagacagaaattgatgctccaaagaatctgaaa
gctgttgatgttaagagtgattctgcagctctaacctggacccctcctcaggcgcaaatt
gatggctacattcttagttacaggcctgaagacggtagtatgcagactgttgagaagaac
tttgtcgcaggagataccacaattagcctctctggtctggccacagggaagaaatacgtc
gtcactctgattgcttacagaggctcaaagaggagtaaagtggtggagaccatatttatc
actgtagaagcagcctatcattttcctatggactgtgcacagatcatgaagaatggaaag
atgaagagtggagtttacacaatctatgtggccaatgatcgcaataagccaatgcaggtg
tattgcgacatgaccacagatggcggtggctggcttgtctttcagagacgcaacacaggc
aagttagacttcatgaagcgctggagacaatacatgcaaggctttggggaactgactgat
gaattctggcttggcctggagaacattcatgcgctgaccaacacgagcacaaaatatgaa
gtgcgattcgatctgggtctgggaagtgagcgtgcttacgctgtctatgacgactttaaa
gtaggatcagccaagcagaaatttaagctcactattggcaattacagaggaaatgcaggt
gatgctatggcttaccaccagggcagacctttcactactatagactcagacaatgacatt
gccctgggtaattgtgctttcacacaccatggtgcctggtggtacaaaaattgccactta
gccaacttaaatggcaaatttgaggacaacagacacagcatgggggtgaactgggagccg
tggaagggccacctcatgtccctggactatacagagattaagatccgtccggtgaacaca
gctagccgaaagaagagatcgctcaagcgaagagcagctgcctaa
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