Ictalurus furcatus (blue catfish): 128609512
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Entry
128609512 CDS
T09387
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128609512 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128609512 (chd8)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128609512 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
MUN
HTH_CHD1_Hrp3
LepA_C
Motif
Other DBs
NCBI-GeneID:
128609512
NCBI-ProteinID:
XP_053483975
LinkDB
All DBs
Position
7:complement(5705930..5806591)
Genome browser
AA seq
2544 aa
AA seq
DB search
MADPIMDLFDDSPLFNLDSLPEDAFSQGSSDPVEEALKLALGQVDPPLDSDSAPEASIPV
LSDSAQAPLTTTTTISSVPLKTQPVSQVPLSSVASAPVPIQTITQTSVSMASSSGGSTAV
LMSSPLAVSGSQVAPQHLITQQAAGQAAPKIVILKSPQGQAQVLQSVTGAAGTAGKLTIA
RVVTGAPVRPGMSIVSGGTVLNATQSVQGPVKVGTGVQRLVQTPNGPVKQVLLTSLPQTH
VQLPTQTQITQAQTEMPKLQLQTQVQPSQVPIQAQVQEQVAATTGSTVAAQTQGVTLSTV
AQQVEPKRITLVLQPSSQGGTNQVGTVTVGGNPSAGAGQQGQQSRLVLGSLPGKLVLQGG
QLAALTQARAGQTGAQPKVLTIQLQVQQQPNQQGAKFQLVSGTANASGCHQVVQLSQGQG
VQRLAVPVKLLLQQQTSSASCSGGAVSVVKVINTSTGSSANSTTASQGLRIVKATEPLRK
VETLCKQEKANRIVAEAIARAKARGERNIPRVLSQDEFPARQTSTDIDGVASPTGAKKKS
AGGNKKKCPALGAATVKATVGEKKVKVKSTGSAVAGGGGGCKSKGKTKPNTITLVGGKKR
KRNASSDHSDGELNSPATPLTQEENLSQMRRSNRQVKRKKYTEDLDIKITDDEDEPGEDV
DVTTPAVILSTGHSQPMGTPFQGLEGDGLPSMQFFVENPSEEDAAIVDKVLSMRLTKKEV
SPGQYASVEEFFVKYKNYSYLHCEWASLEQLERDKRIHQKLKRFKAKQSQMRTFFQEDEE
PFNSDYIEVDRILDESHSVDKENGEPVIYYLVKWCSLPYEDATWELKEDVDEGKVEEFKR
IQSRQPRIKRPPRPPASAWKKLEQSREYLSGNTLREYQLEGVNWLLFNWYNRQNCILADE
MGLGKTIQSIALLSEVFATGVQGPFLIIAPLSTITNWEREFSTWTEMNAIVYHGSLASRQ
MIQQYEMYCKDDKGHLIPGAYKFDALITTFEMVLSDCPELREIYWRCVIIDEAHRLKNRN
CKLLDSLKMLNVEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLREFGNLKTEEQ
VQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGAN
HNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVAELREVYNASAPDFHLQALVRSAGKLV
LLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLLHKRYLYERIDGRVRGNLRQAAIDRFS
KSDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMLDKASLKLGLDRAVLQSMSSNKDNNVNGVHQFTKKEIEDLLRKGAYAAI
MDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQ
KWAQKADIDLDTINRKNTLVIDTPRVRKQTRQYSSLRGESGELSDLDSDDEYPPQNSRQA
RASRRADRHSGGGYGRTDCFRVEKHLLIYGWGRWHDILSHARCKRRLGEKDVETICRVIL
VFCLLHYRGDENIKSFIWELITPPENGQEPHTLLNHSGLSIPVPRGRKGKRVKAQSSFDV
QKAEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHVNSILEGADSR
DIDIWLPEMEQQDVPSGWWDTEADRCLLIGVFKHGYEMYTTMRADPCLCFLGRCGRPDDQ
EIKAEQHSADPDLRDGGAYDKFSEDPEFKPVIRHSKEMYEETDPRNMDEFFVEDHSTYST
VVPVEAQSSGSMGTCYWPTSSTLTARLRRLITAFQRSYRREQLKMEAAEKGDRRRRRCEQ
ATKLKELARQERQQRWTRREECDFYRVVSTFGVERIKTEVGTQEGREAKLDWTRFRTHAR
LDKKTDESLNRYFHCFVAMCRRVCHLQPVCGEESLDLSQSLAPITEERASRTLYRISLLS
RLRELVLPHPSLEERLALAPPSSDLPNWWCTPQHDHELLLGAASCGVSRTEHSIFSDSQF
SFIQAHHEYIQKQQACLAAQTLTHSPSQQGDNVREVKSGDENQVLESICSSALPALPFSH
SEGKRREQQGWSWNKIKERGPRELGTKQAETDGGPSDSDSDSDSESSTSSHRSPSSDVSG
DSDAERDEQEPLKICDADEENSTYSFTPSQDGAPLETLSDPLRVDWPKDRVLINRIDNLC
TLVLTGHWPSGRRYTSDPQLTLAYDEQGLGDDLGYTRISRKGNSTHSGQDGEETEFTVKL
LKEEGLKLTFSKQALIPNGSARVSSGRRRRRDQESSDMEGVLSAPRKRDLPNWLKENPEY
EVEGDMLELLVNRTKRKRRKKRTEKEQAPTGSERVKVIDMKTGKKVQYGGLYGPALQDLK
EYLEENPHHAVAPEWSDTVRNSGFLPEHFFHRLLTLHTSVSRQSHNYLTNPSAQTDPHLE
EGENETLVSDGAYIMDDEDLDSSALTTHHFLTSTYDAKMEAGSLDMDKGDALSPIGYDSS
DREAILDDVIMAPKNSDSSSCSED
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccattatggacctgtttgatgattcaccactgtttaacctggattccctg
ccagaagatgctttttctcagggttcctcagacccagtagaggaggctctgaagttggcc
ctcggccaagtggatcccccattagattcagattcagccccagaagccagtatccctgtc
cttagtgacagtgctcaagcaccactaacaaccacaacaacaatctcttctgttccactt
aagacgcaaccagtaagccaggtgcccctttcatctgttgcttcagctccagttcccatt
cagacaataactcagacttctgtttccatggctagtagtagcggtggttcgactgctgtt
cttatgagttcccctttggctgtgtcagggtctcaagttgctccccaacaccttattaca
caacaggcagcagggcaggcagccccaaaaatagtgattctgaagagccctcagggtcaa
gcccaagtactacagagtgttacaggagctgcgggcactgctgggaagcttaccattgca
agagttgtgacaggtgcacctgtaagacctggaatgtccattgtctcaggagggacagta
ttaaatgctacacaatctgtgcagggaccggtaaaggtggggacaggtgtccagaggttg
gtacagacacctaatggacctgtgaagcaggtgctactgacctctttgccccagacacac
gtccagttacctacacagacacagattacgcaagcacagacagagatgccaaagttgcag
cttcaaactcaagtacagccgtcacaggtgccgatacaggcacaggtccaagagcaggtt
gctgctacaactggaagtacagtggcagctcaaacgcaaggtgtcaccctgtcgacagta
gcacaacaggttgaacctaaaagaatcacactggtgctgcagccgtcttctcagggtggg
acaaaccaggtcggcacagtgacagttggtggcaatccatcagcaggagctggacaacag
ggccagcaatccaggcttgtgttgggctctctgccggggaaattagtgcttcagggtggc
cagttggcagctcttacccaggctagagcaggccagacaggggcacaaccaaaggtgctc
accatccagcttcaagtacagcagcagcccaaccaacagggagccaagtttcagctcgtt
tctggtactgcgaatgccagtggctgccaccaagttgtccagctttctcaaggccaggga
gtacaaagactggcagtgcccgttaaacttctgctacagcaacagacaagctcagcttct
tgttctgggggtgctgtttccgtggtgaaggtcatcaatacctcaactgggtcttctgct
aactccacaactgcctcgcagggtttacgtattgtcaaggccactgagcccttgcgaaaa
gtggagactctgtgtaagcaggagaaagccaatcgaattgttgccgaggccattgctcgg
gctaaagcccgtggtgagcgaaacatcccacgggtgctcagtcaagatgaatttcctgcc
agacagacatccactgacattgatggtgttgcaagtccaactggtgccaagaagaaaagt
gcaggagggaacaaaaagaagtgccctgcattgggtgcagcaactgtgaaagctacagtt
ggagaaaagaaggttaaggtgaaaagtactggatctgcggtggctggaggaggtggaggc
tgtaagagtaaagggaaaacgaagcccaacaccatcactctggtaggtggtaaaaaaagg
aaaagaaatgcatcttcagaccattcagatggagaactgaactctcctgccacacccctc
acgcaagaagaaaatctgtctcagatgagacgttctaatcgtcaagtgaaaaggaaaaag
tatacagaggatttggatattaaaatcacagatgatgaagatgagccaggtgaagatgtg
gatgtgaccacaccagcagtcatattgtctacaggacattctcagcctatggggactcct
ttccaagggctagaaggggatggccttcccagcatgcagttttttgtggaaaacccaagt
gaagaagatgcagcaattgtggataaagtgttgtctatgcgccttaccaaaaaggaggta
tctccaggccagtatgccagtgtagaggaattctttgtcaaatataaaaactactcgtac
ttgcactgtgaatgggccagtctggaacagcttgagagagacaagaggatccaccagaag
ctgaagagatttaaggctaaacagtctcaaatgagaaccttcttccaagaggatgaggag
ccgttcaattcagattatatagaagtggaccgcatcctggatgaatcccatagtgtggac
aaagaaaacggagagccggtgatatactacttagtgaagtggtgctctctgccctatgag
gatgccacgtgggagctgaaagaagatgtagatgaagggaaggtggaggaattcaaaagg
atccagagtcgccaacccagaatcaaaagacctcctcgcccacctgcaagtgcatggaag
aagttggagcaatcacgagaataccttagtggaaacaccctgcgagagtatcagctagag
ggagtcaactggctacttttcaactggtataacaggcagaattgcattctggcggatgag
atgggtcttggtaagactatccagtcaatagccctcctgtctgaagtatttgctactgga
gtccagggaccctttctgataattgcccctctctccaccatcacaaactgggaaagagaa
ttttccacatggacagaaatgaacgctattgtctatcatggcagcctagccagcagacaa
atgatccagcagtatgagatgtactgcaaggatgataaggggcacctcattccaggagct
tataaatttgatgctctgatcacaacctttgagatggttctgtctgactgcccagaactg
agggagatctattggcgttgtgtgatcattgatgaagcacatcgcctgaagaacagaaac
tgcaaactgcttgacagtctcaagatgctaaatgtggagcataaagtgctgttaacaggc
acacctttgcagaatactgtggaagagttgttcagtctgttgcacttcttagaacctgca
cagttcccttcggagacagagttcctgcgtgaatttggtaatctcaaaacggaggagcag
gtgcagaaattgcaggctattctgaaacccatgatgctacgcagattgaaggaggatgtg
gaaaagaacttggcaccaaagcaggagaccattattgaggtggagttgactgatgtgcag
aagaagtactaccgtgctattctagagcgtaacttcagcttcttgagcatgggagctaat
cacaacagcaatgtccccaatcttcttaacaccatgatggagctccgcaaatgctgcaac
cacccttatttaatcacaggtgctgaagagaaaatagtggctgaacttagggaggtgtac
aatgcctcagctccagacttccaccttcaggccttggtgcgttcagcagggaaactggtc
cttctggataagttgctgcctcgtctcaaggctggtggacacaaagtccttattttctcc
cagatggtgcgctgtctcgacattctagaagattatctcctccacaagagatatctctac
gaacgcattgatggtcgagtaagaggaaaccttcgtcaggcagccatcgatcgcttcagt
aagtcagactctgaccggtttgtcttcttgctgtgtacccgtgctggaggactgggtatt
aacctgactgctgctgacacttgcgttatattcgactctgactggaacccacagaatgac
cttcaggcccaggcccgttgccatcgtattggccagtccaaggcagttaaggtgtatcgt
ctcatcaccagaaactcctatgaacgggagatgttggacaaagctagtttgaagttggga
ctggatagggctgtgcttcaaagcatgagtagcaataaagacaataatgtcaatggggtt
caccagttcaccaagaaggaaattgaagatttgctaagaaaaggagcttatgctgctatt
atggatgagaatgatgagggcagccgtttctgtgaagaagacattgaccagatccttcag
aggagagccaccacgatcaccattgagagtgaaggcaagggatccaccttttctaaggcc
agctttgtggcatctgaaaataggactgacattgctctggacgacccggaattttggcag
aagtgggcccagaaagcagacattgacttggacaccataaataggaagaatacccttgtg
attgatactccacgtgtgcggaagcagacacgacagtactcgtctcttcgtggggaaagt
ggtgaactttcagacttggacagtgatgatgagtatccaccccaaaattctcggcaggct
cgagcctcacgccgtgctgaccgtcactctggtggtggctatggccgcactgactgcttc
agagtggagaaacacctgctgatttatggctggggacgttggcacgatatcctgtctcat
gctaggtgtaagcgtcgtcttggggaaaaggatgtggagaccatctgcagggtcatccta
gtcttctgtctgctacattaccgtggagatgaaaacatcaaaagctttatatgggagctc
atcacgcctccagagaatggccaagaaccacacacactcctcaaccactctggtctgtcc
attcctgtgcctcgtggaagaaaagggaaaagagtcaaggctcagagctcttttgatgtg
caaaaggcagagtggatccgcaagtataacccagatacacttttgttggatgacagctat
cgcaagcacctcaaacaccagtgtaacaaggtattgctgcgagtacgtatgctgtattac
ctgaaacaggaagttattggagaacatgtgaactctatacttgaaggcgctgacagcagg
gatattgacatttggctgcccgagatggaacagcaggatgttccatcaggctggtgggat
acagaggctgatcgttgtttgcttatcggagtgttcaagcatggatacgagatgtacact
acaatgcgtgctgatccctgtttgtgtttcctggggagatgtggtcgtcctgatgaccag
gagatcaaggcagaacagcactcagcagatccagatttgagagatggaggtgcctatgac
aagttttcagaggatccagagttcaaacctgttataaggcacagcaaagaaatgtatgaa
gagactgaccccaggaacatggatgagttctttgtggaggatcactccacatattccact
gttgtgccagttgaggcacaatcctcaggatctatgggaacctgttactggccaacaagc
tccaccctcacagctcgactacggcggctaatcacagcattccagcgcagttacagacga
gaacaactcaagatggaggcagctgaaaaaggagatcggcgacgccggcgctgtgaacag
gccaccaagctcaaagagcttgcgcgacaagagcgacagcaaaggtggactcgtagagag
gagtgcgacttttatcgagtggtgtccacatttggtgtggaacgcataaagactgaggtg
ggaacccaagagggtagggaggccaaactggactggacacgtttccgcacgcatgcgaga
ctagacaagaaaactgatgagagtcttaaccgatacttccattgctttgtggctatgtgt
cgcagggtttgtcacttgcagcctgtctgtggcgaggaatctctggacttgtcccagtca
ctagcacccatcactgaggagcgagcctcacgaacgctctaccgaatcagcctgttgtcc
cgcctacgtgagcttgtgcttcctcatccctccctagaggagcgccttgccctggcacca
cccagctctgacctacccaactggtggtgtaccccacagcatgatcatgaactgcttctc
ggtgctgccagctgtggcgtaagccgcacagagcattccatattctcagactcacagttc
tcctttatccaagcccatcatgagtatatccagaagcagcaagcatgccttgctgcacaa
accctcacacacagcccatcacaacagggagacaatgttcgagaagtaaaaagtggtgat
gagaaccaggttttggagtccatttgctcatcagcccttccagccctaccattctctcac
tctgaaggcaaaaggagagaacaacaaggctggtcctggaataaaatcaaagagaggggg
cccagagagcttggaacgaaacaagcggagacagatggagggccttcagactcggattct
gattctgattctgaatcatctacctcttcccatcgatctcctagttcagatgtcagtggg
gacagtgatgcagagagagatgagcaggaaccactgaagatctgtgatgcagatgaagag
aacagcacctactcattcactccatcccaagatggtgctccactagaaacactcagtgac
ccactcagagttgactggcctaaggatcgtgtattaataaaccgaatagataacctttgt
actctggttctgacggggcactggccatctgggcgacgatatacctcagatcctcagcta
actctggcatatgatgagcaagggcttggagatgacctaggctacacccgtatatcccgc
aaaggcaacagtacccactctggacaggatggagaagaaacggaatttactgtcaaactc
ttgaaagaggaagggctgaaattgaccttctccaaacaggctctaatacctaatgggtca
gcaagagtgtcaagtggacgtcgaaggcgtagagatcaagagtcatctgatatggaggga
gtactcagtgcccctcgtaagagggacctgcccaactggctcaaagaaaatcctgaatat
gaagttgagggtgacatgctagagctgttggtgaacaggaccaaaaggaaaaggagaaag
aagagaacggaaaaggaacaagcaccaactggcagtgaaagagttaaggttatagacatg
aagactggcaagaaggttcagtatggtggattgtacggacctgcgttgcaggacttaaag
gagtatcttgaagagaatcctcaccatgcagtagcaccagaatggtcagacactgttcgc
aactcgggcttcctgccagaacatttcttccaccgactgttgactctgcacacctcggtc
tccagacagagccacaattacctcaccaacccttcagcccaaactgaccctcatctggag
gaaggtgagaatgagacactggtttctgatggagcttacatcatggacgatgaagatctg
gacagtagtgcccttactactcatcacttcctaacttctacatatgatgctaagatggag
gctggttctcttgacatggacaaaggagatgctttgtcaccaattggatatgatagctct
gatagggaggctattttggatgatgtgattatggcacctaaaaattctgattcttcctca
tgctcagaagattga
DBGET
integrated database retrieval system
