Ictalurus furcatus (blue catfish): 128609595
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Entry
128609595 CDS
T09387
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
KO
K24495
myomesin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128609595 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128609595 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128609595 (myom1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
ChitinaseA_N
C2-set_3
Motif
Other DBs
NCBI-GeneID:
128609595
NCBI-ProteinID:
XP_053484138
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All DBs
Position
7:complement(8191182..8221870)
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AA seq
1492 aa
AA seq
DB search
MAGSIQVQQEQQRRSLETQYESSYHQSSLSSFSHRSYAAHVSSVGLETSSKKQEKKLSSI
SRVQTSGKKQEKKLSSTSRVKSSSKKQEEKKTSYAREHKCACLALDKEESVVGYVVPVCR
SSYLATQDLMESQEELKEEGLGYVVMKNLFSRDAEYQLKLVKKSRSTTMRESAERLSLSK
KIQEKHEFQRKLNTDSLTHPPEFIVKPRGQTVWEGKSVTLHCTVAGWPKPRVAWYKNNLL
IDAKAHAEKYTTESNYNMHSLEIKNCEFDDTAEYRISALNVKGESSAFASVIIKRFKDGE
ATERPHGFSPEHGVTFRTTVIDKFGVAFGREGETMSLGCTVIVYPTVKRYQPEVLWYRNG
VVLEPSQWVQMHWSGQRATLTLIHLNKEDEGFYTLRVNTKSGFDSHSAFVFVRDADVEVE
GVPVAPLDVRCHDANKDYVVVTWKQPAVEGSSSILGYFIDRCEVGTQHWIQCNDTPVKYA
RFPVTGLIEGRTYIFRVSALNIAGVSHPSRVSDPVVAMDPSDRARLRAGVSAPWTGMIKF
TEEDPTVGVIPGSPTDLAVTEATKSYVVLSWKPPVQRGHEGVMYYVEKCMVGTDTWQRVN
TGMPAKSPRFALFDLAEGKSYTFRVRSCNSAGVSEPSEETVATTVGDRLDLPSAPGPVVP
IRNTASSVVVTWKASKEAVELVRYYVEVSVVGSNVWVPCNNKPVRDTRFVCHGLNTGDSC
VFRVKAVNAAGYSTYSSESESCLVKAALEVPAPPSALTLVERFRDYMVLNWQAPAKTGGV
DIRGYYLDYRTVKGSVVSKWHEINTKAATGTTYKVEDLKENVLYQFQVRAVNQAGISESC
ISSVAFECKEWTVALPGPPHGLHMLEVRKDSLVLLWESPTFNGRSPVTGYYVDIKEGNGK
WRGVQDRSTKNTYLQISGLKEGASYILRVTAKNIAGVGGPSKATDPIVAQTRPGTNEIVV
DVDDDGVISLIFECSEMTESSQFVWSKNYEALTDTSRLTIETVKGKSRAIFNDPSLEDLG
IYSCVVTNTDGVSASYTLTEEGLRRLLDISHDHKFPIIPFKTEMAVELQEKGRVRFWAQV
AKFTSKCQVEYVFNDNIITQGKKYTMNFDSKTGIIEMFMDSLEITDEGTFTFNLVDGKAT
GRTSLVLIGKEFAELQKKSEFERAEWVRRQGPHFVEYLSFEVTQECNVYLKCKVGNIKAD
TEITWFKDGIEIAEDDEDAQKIGIADGVLSFNIGKLSKKDAGVYEVKLWDERGKDKTLFD
LTEAGYKAVLNEMFRVIAHSSTELKVQSTEHGIILHSFVVYHTEELPIGWFHKDSKVSHS
DRVQCGVTGEQLWLKINEPTDKDKGKYAIDIFAGEGSVRRVLDLAGQVWEEAYSEFQRLK
AAAIAERNRARVIGGLPDVVTIQEGKSLNLTGNVWGDPTPEVTWLKNDKELVRDDHITLK
FEHGKFASITIAAVNSADSGKYALLVKNKYGTEAGEFTVSVYIPEDEAEKKE
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatccatacaagtgcaacaggagcagcagcggcggagtctggagactcaatat
gaaagcagctaccaccaaagctcgctgtcgtcctttagccaccggtcttatgcagctcac
gtgagcagcgtggggctggagacttcaagtaagaaacaggagaagaaactgagctccatc
tccagggtgcagacttctggtaagaagcaggaaaagaaactgagctccacttccagggtg
aagtcttcaagtaagaagcaagaggaaaaaaagacttcctacgccagagaacacaagtgc
gcctgcctggcactggacaaagaggagagtgtcgttggatacgtggttcctgtttgtaga
agcagttatttagccacacaggatctgatggagagccaggaggagctgaaggaggaaggc
ctgggctatgtggtcatgaagaacctcttctccagagacgctgagtaccagctgaaactg
gtgaagaagagccgcagcacgactatgagggagtctgcagaaagactgtcccttagcaag
aagattcaagaaaagcacgagttccagaggaagctgaacacggacagcctgactcatcct
cccgaattcattgtgaaaccgcgtggtcagactgtgtgggaaggcaagagtgtgacactg
cactgcactgtggctggctggcccaaaccccgcgtggcctggtacaaaaataacttgctc
atcgatgcaaaggctcacgctgagaagtacactaccgaaagcaattacaacatgcactct
ctggagattaaaaactgcgaattcgatgacacggccgaatatcgcatctcggccctcaac
gtgaaaggcgagagctctgccttcgcgtcggtcatcattaaaagatttaaagacggagaa
gcgactgaaagaccccatggtttcagtcccgaacatggcgtcaccttcaggaccaccgtt
atcgataagttcggagtggccttcggccgtgaaggagagaccatgagtttgggctgcact
gtcatcgtctatcccactgtgaaacgctatcagcctgaggtgctctggtacaggaacggt
gtggttctggaaccatctcaatgggtgcagatgcactggagtggccagcgagccacactc
actctcatccacctcaacaaagaggacgaaggattttacactctgcgcgtcaacaccaag
tcgggcttcgactctcactccgcctttgtgtttgtccgagacgctgacgtggaggttgaa
ggggtccccgttgcccctctggatgtgaggtgtcatgatgctaataaggattatgtcgtg
gtgacctggaaacagcctgcggttgagggcagcagctccatcctgggctactttatagac
aggtgtgaagttggcactcagcactggatccagtgtaacgacacgccagtaaaatatgcc
cgttttccagtcaccgggctcatagaggggcgcacttacattttccgggttagcgctttg
aacattgccggggtgagtcacccttctcgtgtctctgaccctgtggttgccatggatcca
tctgaccgagcccgtctgagagctggtgtttccgctccatggaccggtatgatcaaattc
actgaggaagatcccacagttggtgtaatccctgggtctcctactgatctggctgtgact
gaggctactaagagctatgtggtgctcagctggaagcctcctgttcagagaggacatgaa
ggagttatgtattatgtggagaagtgtatggttggcacagacacctggcagagggtgaac
actgggatgcctgcgaagtcccctcgctttgccctttttgacttggccgagggcaaatcc
tacaccttccgcgtgcgttcctgcaactccgcaggcgttagcgagccgtctgaggaaacc
gtagccacgactgtcggggacagactggacctgccctcggcaccagggcctgttgtgccc
atcaggaacacagcctcctccgttgtggtgacctggaaggcttctaaagaggccgtagag
cttgtgcgctactacgtggaagtcagcgtcgtgggcagcaatgtgtgggtgccatgcaac
aacaagccagtcagagacaccaggtttgtgtgtcacgggctgaacacgggagacagctgt
gttttcagagtgaaggccgtgaacgctgctggctacagcacttattccagcgagtccgaa
tcctgccttgtaaaagcagccctcgaggtgcctgctcctccatctgctctcactttggtg
gagcgttttcgtgactacatggtgttgaactggcaggctcctgctaaaaccggaggagtc
gatatcaggggctactacctggattacaggaccgttaagggcagtgtcgtaagcaagtgg
cacgagatcaacaccaaggctgccactggaaccacctataaggtggaagacctgaaggag
aatgtattgtaccagttccaggttcgtgcagttaaccaggctggcattagcgagtcctgc
atcagcagcgttgccttcgagtgtaaggagtggaccgttgcattgccaggccctcctcat
gggcttcacatgctggaggtgagaaaggattcattggtgctgctttgggagtcgcccacg
ttcaacggccgtagccccgtcaccggctactacgtggacatcaaggaagggaatggcaaa
tggagaggagttcaggacaggtccaccaagaatacatacttgcagatatcgggcctgaag
gaaggtgcctcctacatactacgtgtcactgctaagaatattgcaggtgttggtggaccc
tccaaagctacagaccccatcgtcgctcagactcgcccaggcactaatgagattgtggtc
gacgtggatgacgatggcgtgatctcgctgatcttcgagtgctctgagatgactgaaagc
tctcaatttgtgtggtcaaagaactacgaggctctcaccgatacctcccgtctcactatc
gaaacagtcaagggaaaatccagagccatctttaatgatccttcactggaggacctgggc
atctactcctgtgttgtcaccaacactgatggagtttctgccagctacacactgacagag
gagggactgaggcgcttgttggatatcagccatgaccacaagttccccattattcctttc
aagaccgaaatggctgttgagctacaggagaaaggacgcgtgcgtttctgggcgcaggtt
gctaagtttacctccaaatgccaagtggagtatgttttcaacgataacatcattactcaa
ggaaagaaatacaccatgaattttgacagtaaaaccggcattattgagatgttcatggac
tctttggaaatcaccgatgaaggaaccttcacgtttaacctcgtcgatggcaaagctacc
ggtcgtaccagtttggtgcttattggaaaagagtttgctgagcttcagaagaagtctgag
tttgagagagcagagtgggtcaggagacaaggccctcactttgtggaatacctcagtttc
gaggtcacccaagaatgtaacgtgtacctaaaatgcaaggtcggaaatatcaaagcggac
actgagataacctggtttaaggatggaattgagatcgcggaggatgacgaagatgctcag
aaaattggcattgcagatggcgtgctgtccttcaacattggcaagctttcaaagaaagac
gcgggtgtttacgaagtgaagctgtgggacgagagaggaaaggataagactttgttcgac
ctgacggaagcaggttacaaggccgtgctgaatgaaatgttcagagttatagcgcactct
tctaccgaattgaaggttcagagcactgagcatggaatcatcctccactcgttcgtcgtg
tatcacacagaagagctccctattggttggtttcacaaagatagcaaggtttcacactca
gacagagtgcagtgtggagtcacaggagagcagctgtggctgaagatcaacgagcccaca
gacaaggacaagggcaagtacgccatcgacatcttcgccggcgaaggcagcgtcaggaga
gttctcgacctcgccggccaagtgtgggaagaagcctattcagagttccagaggctgaag
gctgcagctatcgcagagagaaaccgagcgcgtgtgatcggaggcctgccagatgtggtc
acgatccaggaaggcaagtctttgaacctcaccggcaacgtgtggggcgaccctacacct
gaagtcacttggctgaagaatgacaaagagctggtacgtgacgatcacatcacgctcaag
tttgagcacggcaagttcgccagcatcaccatcgcggcagtcaattcggccgactcgggc
aagtacgccctgctggtgaagaacaagtacggcacagaggctggcgagttcaccgtcagc
gtctacataccagaagacgaggctgagaagaaagagtag
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integrated database retrieval system