Ictalurus furcatus (blue catfish): 128609777
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Entry
128609777 CDS
T09387
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128609777 (cpdp)
Enzymes [BR:
ifu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
128609777 (cpdp)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128609777 (cpdp)
Prokaryotic type
128609777 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
128609777
NCBI-ProteinID:
XP_053484510
LinkDB
All DBs
Position
7:12675484..12685430
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AA seq
526 aa
AA seq
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MRAISGRIIRCSLEVRRFSVIMSENKRNLKRKGEPMKGLEKLAAARGAERGARWLQEKVE
EMRRNSSECKFNTKRLRFLSDAKKVRQGCGAVLYWMARDQRVQDNWALVYAQQLALEENL
PLHVCFCLVPRYLEATYRQYAFMLRGLQEVAKECTSLGIQFHLLRGEPELTLPGFVKHWD
IGAVVTDFNPLRLPLQWTERVKKELPPDVPFIQVDAHNVVPCWGASNKLEYAARTIRGKI
TKLLPEFLTEFPPVDMHPHPSTKTAKKVDWEKVMSSLEVDRSVGEVLWAQPGTAGGVAML
ESFIDQRLRIFASERNNPNASALSQLSPWIHSGQLSAQRVLLEVKRWGKHSTESVSSFTE
ELLVRRELSDNFCFYNDNYDNINGAYDWAKKTLQDHAKDSRPYLYTREQLENADTHDQLW
NAAQRQLMLEGKMHGFMRMYWAKKILEWTASPEEAVNISIYLNDRYALDGCDPNGYVGCM
WSVCGIHDQGWAERPVFGKVRYMNYAGCKRKFDVGQFERRYAGKKA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctatttctggcagaattattcgctgtagtttagaagttagaagattttccgtc
atcatgtccgagaataaaaggaacctgaagcgcaaaggagagccgatgaaaggcctggag
aagctcgcagcagcccggggagcggagagaggagcgcggtggctgcaggagaaagtggag
gagatgcggagaaactcatctgagtgtaaattcaacacgaagcgtctccggttcctgtct
gacgccaagaaagtgagacagggctgcggggcggtgctttactggatggcccgggatcag
agagtgcaggataactgggccctggtttacgctcagcagctcgccctggaagagaatttg
cctctccacgtgtgtttctgcctcgtgccacggtatttagaggcgacttatcgccaatac
gccttcatgctcaggggactgcaggaagtggccaaggagtgtacaagtctgggtattcag
ttccacctcctgcgtggcgagcccgagctgacactgcctggttttgtgaaacactgggac
atcggtgccgttgtgactgatttcaaccctctccgtcttccactgcagtggactgaacgt
gtgaaaaaggagcttccgcctgatgtccccttcattcaggtcgacgcccataatgtggtg
ccatgctggggggcatcgaataaactggagtatgcagccagaacgatccgggggaaaatc
accaaactcctcccagagttcctcaccgagtttcctccagtggacatgcaccctcacccg
tccaccaaaacggcaaagaaggtggattgggagaaagtgatgtcatcactggaggtcgac
cgcagcgttggggaggttttgtgggcacagccgggaacagcgggaggtgtcgccatgctt
gagtcgtttatagaccagcggctgcgtatttttgcctccgagaggaacaacccgaacgcc
agtgcgctcagccagctctcaccctggatccactcgggtcagttatcagctcagcgtgtg
ctgttggaggtgaagcgttgggggaaacactcgaccgagtcagtgtcctccttcacagag
gagctgttagtacgcagggagctctccgataacttctgcttctacaacgacaactacgac
aacatcaacggtgcgtatgattgggcgaagaagacgctgcaggatcacgctaaagactct
cggccttatctgtacacacgagagcaactggaaaacgcagacacacacgaccagctgtgg
aacgctgcacagaggcagcttatgttagaggggaagatgcacggtttcatgcgcatgtac
tgggctaagaagatcctggagtggacagcttcacccgaggaggcggtgaacatctccatc
tatctgaacgaccgctacgcgctggatggctgcgacccgaacggatacgtgggctgcatg
tggtccgtctgtgggattcatgatcagggctgggcggagcggcccgttttcggtaaagtg
cgctacatgaattacgcaggctgcaagcgcaagttcgatgtgggccagttcgagaggagg
tacgctgggaagaaggcctga
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