Ictalurus furcatus (blue catfish): 128609839
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Entry
128609839 CDS
T09387
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128609839 (elavl1a)
03041 Spliceosome [BR:
ifu03041
]
128609839 (elavl1a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128609839 (elavl1a)
mRNA cycle factors
Stress granule specific factors
128609839 (elavl1a)
Spliceosome [BR:
ifu03041
]
Common components
Common spliceosomal components
General mRNP proteins
128609839 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_7
RRM_3
RRM_DEAH11
YqeY
Motif
Other DBs
NCBI-GeneID:
128609839
NCBI-ProteinID:
XP_053484642
LinkDB
All DBs
Position
7:complement(13536024..13544110)
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AA seq
379 aa
AA seq
DB search
MGVDVTFRLEFPCGGGFVSRARSHVQTEGFRKVIFFCFVFESRFGAGVKSEVYDMSNGYE
DHMVEEAKDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNY
VNPSDAERAISTLNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKNMTQKDVEDMFTR
YGRIINSRVLVDQTSGLSRGVAFIRFDKRSEAEDAIKELNGQKPPGAAEPITVKFAANPN
QIKNSQIIPQVYHSQSRRFGGPVHHQAQRFRFSPMGVETHMGGLSGANMGGSAQAGWCIF
IYNLGPDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAVAIASLNG
YRLGDKILQVSFKTSKTHK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggacgtgactttccggttagaatttccttgtgggggcggttttgtgtcacgc
gcacgcagccacgttcagacagaaggctttcggaaggtgatttttttttgttttgttttt
gagagcagattcggcgcgggggtgaagtcggaggtgtacgacatgtcgaacggttacgag
gatcacatggtggaggaggcgaaggacgccaagacgaaccttattgtgaactatctgccg
cagaacatgtcgcaggaggagctgcgcagtctcttcagcagcatcggcgaggtggagagc
gctaagctcatccgagataaagtcgccggccacagtttagggtacggctttgttaactat
gtaaaccctagtgatgcagaaagagcaatcagtactctgaatggcttgaggctacagtct
aaaaccatcaaggtgtcatacgcacggccgagctcggactcaatcaaagacgccaatctg
tacatcagcggcctccctaagaacatgacgcagaaggacgtagaggacatgttcacacgc
tacggacgcatcatcaactctcgcgtgctggtcgatcagacttcaggtctttcccgcggc
gttgcatttatacgtttcgacaagcgctccgaggcagaagacgccattaaagagctgaac
ggacagaaacctcccggcgcagctgagcccatcacagtcaaatttgctgccaatcccaat
cagattaaaaactcacagatcatccctcaggtctatcactcacagtctcgccgcttcgga
ggacctgtacaccaccaggcccagagattcaggttctccccgatgggtgtggagacccac
atgggtggtctgtctggggcgaacatgggtgggagtgcgcaggccgggtggtgcatcttc
atctataacctgggtccagatgcagacgagggaatcctgtggcagatgttcggtccattc
ggcgccgtcaccaacgtcaaagtgatccgagacttcaacaccaacaagtgcaaaggcttc
ggttttgtcaccatgaccaactatgaggaggcggccgtggccatcgctagcctcaacggc
tacagattgggggacaaaatcctgcaggtgtccttcaaaaccagcaagacgcacaagtag
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