Ictalurus furcatus (blue catfish): 128609917
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Entry
128609917 CDS
T09387
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128609917 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128609917 (taf6l)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128609917 (taf6l)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128609917 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
128609917 (taf6l)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128609917 (taf6l)
STAGA complex
128609917 (taf6l)
TFTC complex
128609917 (taf6l)
SAGA complex
128609917 (taf6l)
SLIK complex
128609917 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
128609917
NCBI-ProteinID:
XP_053484799
LinkDB
All DBs
Position
7:complement(14973475..14981205)
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AA seq
636 aa
AA seq
DB search
MTETREERRFAEVSRDSIKLMAESAGVELADELASMLAEDVCYRLREAAQNSSQFMRHAK
RRKLTVEDFNRGLRWSNTEVVCGYGAQDAVPFRALKEGELFFVEDREVNLVELALATNIP
KGCAETTVRVHVSYLDGKGNLEPQGTVPSAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LMDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYRQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKALSLTAEGGPAALRSSAGGGMCFRESSPGLSPPPEALSEAPLGIAS
HLQAAGTGCQWEEWTPVSLPAMYCELYSFFGDSLAVRFSTGPALGSAPAAAPVQPSDARK
ESGSGAGSMESTRKMPQLTANMNLSPRPDGSPRTETVPPTLGATGRSLARSSSSSAVPRS
RSSSRPGRSASQSRDIFPKARFLPSQVGPPAFSFLIGGRQMGRRCQGRRFQTSFTPTPSV
SSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLYLPL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgactgagactagagaagagcgtcgtttcgctgaagtttcccgagactccatcaagctg
atggctgagagcgccggcgtggagctggctgatgagttagcctcgatgctcgccgaggac
gtgtgttaccgcctcagagaggccgcacagaacagctcccagtttatgagacacgccaag
agacgaaaactgactgtcgaggacttcaacagaggactgcgctggagcaatactgaggtt
gtttgtggttatggtgcccaagatgccgtaccattccgggcgctgaaagagggcgagctt
ttctttgttgaggatcgggaggtgaacctggtcgagttggctcttgccaccaacattccc
aagggctgcgctgagacgacagtgcgagtgcatgtgtcttatctcgatggaaaaggaaat
ctggaacctcagggcacagttcccagtgctgtgcagtctctgtcggatgacctactcaag
tattaccagcagatcactagagccatattaggagaggatccacatcttatgaaggttgct
ttaatggatcttcagtccaactccaagattgccgctctcctgccttattttgtttatgtc
atcagtggggtgaagtctgtaagtcatgatctggatcagctgaaccggctgttgcacatg
gtgaagagtctggttcagaacccatacctgtatcttggctcgtatgtgcgcagtctggtc
tccagcgtcatgtattgcatcctggagccgcttgccgcctctattaatccactcaatgac
cactggaccctgagggactacgctgctctgcttctcagtcacattttctggactcatggt
gatctggtgagtggactgtaccgtcagattctgttgtcactgcagaaggtcctgtcagac
ccagtgcgtcctctctgctctcattatggagctgtggtcggcttgcacgctcttggctgg
aaggctgtagagcgtgtgttgtatccccacctccctgcctactgggcgaacctgcaagcc
gtgctggacgattactctgtctctaacgcgcaagtaaaagcagatgggcacaaagtctat
ggagccattcttgtggcggtggagcgtctgctaaaaatgaaagccctgagtttgactgca
gaagggggtcctgctgctcttcggagttctgcgggaggagggatgtgctttagagagagc
tctccaggactcagtccccctcctgaagccctgtctgaagcccctctgggtatcgcaagc
cacttgcaggcagctggaacaggatgccagtgggaagagtggacccctgtctccctgcct
gccatgtactgtgagctctactccttctttggagacagcttggctgtgcgttttagcaca
ggtcctgctttaggcagtgcaccagctgcagctccagtgcaaccttctgatgccaggaaa
gagtcagggagtggcgcaggcagcatggagagcacacgcaagatgccacagctcactgcg
aacatgaacctcagccccagaccagatggaagcccacgtactgagacggtaccacctact
ctgggtgctactgggaggtctctggcccgctcttcctcctcatccgcagtccctcgttcc
aggtcctcctcccgtcctgggcgttctgccagccaatccagagacatcttcccaaaagct
cgcttcctgccttcccaggtggggcctccggccttctcctttttgatcggtgggagacag
atgggccggagatgccagggacgacgtttccagacgagcttcactccaactccatccgtc
agctcccttcctccacgggcctatgcccacaaacttccagttatcgggagagtgagcaaa
ccagtgagacgctggacgtgctctcattattcgctgtatctgcctctttaa
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