Ictalurus furcatus (blue catfish): 128609938
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Entry
128609938 CDS
T09387
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128609938 (focad)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128609938 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
128609938
NCBI-ProteinID:
XP_053484844
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All DBs
Position
7:15443333..15513104
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AA seq
1797 aa
AA seq
DB search
MTSETLKKRFEFPSSFIQSQAVRSLVTAVLKEKGQKDKISESNTQSPALVTLWEQCSSES
VVVRSACCDALVLLVEQGHADLHYVLNSILNLLPSARNVQGLIKVVGKLLQIQASQRDKS
TSFSCPYSIRSCPHPYITVLENRPDCWAALLQEIDDFIQLAADKDEPLFISMLAPFLRYL
YCEPQRLSENALLRHGLLRVLLQRREITQGHGSACARVTHQILHCLFNLFPHILVDSITA
VVEISSMAESLSSALLAEPEYWRTELAQLALQLMCVCHLSLQLGGELRSLLHTLHCLLPV
CKEGLPSEQVIMGISLLLLRASASQQTALLELAVKLVPPEERPIWGASLLVMPLLQVLSC
STLMEALTDSQTQAKNQGLATSLLQTIERDTSSPVQNSTQLILPLSTWYSELQVATSVLC
QVSADPTAATDWLYSVQSTLPLCGRVPDSLPLLLTHLILSSEGDLCRLALDTAACIAEAD
PTQVPCLVPVLMFKLGRVSDLTLSHAVLFTLPKLGTHTFCIPQVLHVLQMIASCSKLRAV
ALRLLTALWQKQDRVYPDLQKLMALLEKSSVVVGKEVQWEQILARAACVRDICRERPYQH
GGDMLAAITDTLTQCSQKDQATPAALALQGLHELCRAEVVDLGSTWRALYPKLGCETRPL
VLKAIAEFLSLVPSLRVKTEQYENFKSEAVSVLWSYTLSQDAEVASSGYRALSEFPESSH
SILHLPEPARPEEKQPCDQDKEEKENETEEDLTVPGSSYIKLVDFTQRPVLPALETFLTA
LIRQEMSQMPRGVYHLALRGGNLRSDHGKTVAGVPAFMLKTYEKNRQPGLKPGLAAGLLL
CYDLPVQTDRDGRPISRFMVSRGRSFQQMLTTLIHEVNIQPSEWHRSLLLPQAWRGFLSR
AYHGVLQGRKAELEMLQKQGKESPEELQYKQHCAWLWVRDQLTDVVKAAAKDSPVVQGNC
ILALSGLAVVLSRHESSLPAQSDGQVEVGPEILPTAHWLYMVIDTLLSIVSSSSRPKGQV
FPWFVHRSYSGENTASAIARSCAALGLAMLVPVLVTSHRDAVPSIQDTLQAGLPGVPTAD
DSQAVQFHSGLALGMLMAWLNEEKVSDIGGQTMWELLLSSLEHLESCCFNTQLEYNSGCV
LGLGLLLSSLCSSSDIEQRMRVSVSLDRLLQSLQDSGSMGRMQQEVLAYSVACAGVSAFS
CGIIDASKAEEVMNTLRSMTEESQQTPGLALALGLTVHGLSSSGHGKTEDLHPRLLSAWT
KILLAEGCPTMQRLAALNGVIALVGSETAFLQLRSESEQSPQQQNRLNDVIRSITQIISF
SGTIGLQSNGACLVAHLHLAHMSSSHSRTAVPQDFSYLPEKSILRASVFYITEAGRKGPE
TIAPDLIKVVLAPLATVGTSFQYPPVNWSAILSPLMRLNFGEEVQHHCLELAANQVQTSS
SASLFLGVWLAPPLVHSLSQRTRALLYESLCFWMKHIADDKLQVYVESLAVQQFNPDHRA
QRLSLCLSILHGLAKAMALPNPAQSCWTILCSTTEKIFHLLPDHIQAHEVNLYEGICSCL
SEMSDTEIDRIVKVTEANVEKTTFILSYLSSKGRIPLLGLNDVISTVLQKGKPERISWLL
MQCFYQSRLASSPNTGVPKRMEWLLELMGHIRKVLYGAPTVQYDNAKKGISFLLDVFAAA
VVSWADHPMPLLIGIRAQWFPWQKSSKHIDLPHDLYVNTASTEESVKQCVLAVSYSLKHL
LAKEPWKAQSQKFIDWLFSLTEAPEESLSQIARAALLALKSTPEFKKKTVWTRAYGW
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaaactttaaagaagagatttgagtttcccagctccttcattcagtcccag
gctgtgaggagtctggttactgctgtactgaaggagaagggccaaaaggacaagatctct
gagtccaatacacagagcccggctctggtgacgctgtgggagcagtgcagcagtgagagt
gtggttgtgcgttcggcttgctgtgatgccttggtgctgctggtggagcagggccacgct
gacctgcactacgtcctcaacagcatcctcaacctcctgccctcagcacgaaatgtacaa
gggctgataaaggtggttgggaagctgctacagatccaagcgagtcagagggataaaagc
acatccttctcttgtccgtactcgatcaggagctgccctcatccgtacatcacagtgctg
gagaatcggcctgattgctgggccgctcttctgcaggagattgatgacttcatccagctg
gctgctgacaaagacgagccgttgtttatctccatgctggctccgttcctgcgttacctt
tactgtgagcctcagaggctgtcagagaatgcactgctcagacatggactgctccgagtg
ctgctgcagcgccgggagatcactcagggtcatggctcagcctgtgcgcgggtcacccac
cagatcctgcactgccttttcaatttgttccctcatatactggtggacagcattacagct
gtggtggagatcagttccatggccgagtcgctaagctctgctctgctggccgagcctgag
tactggaggactgagttagcgcagctagcactgcagctcatgtgtgtctgtcacctcagc
ctccagctgggaggagagctgaggtctttactccacaccttgcactgtctcctgcctgtc
tgtaaagagggtctcccatctgagcaagtgatcatggggatctcgctgctcctcctcaga
gcctccgcctcgcagcagactgctctcctggagctcgctgtaaagcttgttccacctgaa
gagagacctatctggggtgcctcattgctggtgatgccactgctgcaggtgctttcctgc
tccactctcatggaggcattaactgactctcaaacgcaggcaaagaatcaaggcctggcc
acttcactgctacagacgattgagagagatacgagcagtccggttcagaacagtacgcag
ctcattcttcctctcagcacatggtacagtgagctgcaagtggccaccagtgtgttatgt
caagtctctgcagaccccacggccgccacggactggctctactccgttcaatccactctt
cctctgtgtggacgtgtccccgattctcttcctctcctgctcactcacctgatcctcagc
agtgagggggatctctgcagactggcattggacactgcagcatgcatcgccgaggccgat
cccactcaggtcccgtgtctggtgccagtgttgatgtttaagctgggtcgagtctctgac
ctgactctgtctcatgctgtactcttcaccttaccaaagctgggaacacacacgttctgt
ataccacaggtcctgcatgttctccagatgatcgccagctgctccaagttgagggccgtg
gctctgcggctgcttactgcactgtggcaaaaacaggatcgtgtgtatccagacttgcag
aagctcatggcgctgctggagaaatcctcagttgtggtggggaaagaggttcagtgggag
cagattctagccagagctgcctgtgtgcgagacatctgcagggagaggccataccaacat
ggaggagacatgttggcagccatcacagacacactgactcagtgctcccagaaggaccag
gccactccagcagcgctggctctgcagggtctccacgagctgtgcagagctgaggtggtt
gatttaggctccacatggagggcgctttatcccaagctgggctgtgagacgagaccactg
gtgttaaaggccatagctgagtttctctctctggtgccctcactgcgtgtcaaaacagag
caatatgagaattttaaaagtgaagcggtcagtgttctgtggagctacactctgagtcag
gatgcagaggtagctagcagtggctacagagccctgtctgaattcccagaatcttctcac
tccatcttgcaccttcctgagccagccagaccagaagagaagcagccatgtgaccaggat
aaggaggagaaggagaatgagactgaagaagatctcactgttccaggctcttcatacatt
aagcttgttgatttcacacaacggccagttttaccagcacttgagaccttcctaacagct
ctcataagacaagagatgagccaaatgcctcgtggagtgtaccatttagccctgagaggt
gggaacttgcgctctgaccacggcaaaactgtcgctggagtccctgccttcatgctgaaa
acgtatgagaagaacaggcagccaggtctgaaacctggtcttgcagccggtttgctgctc
tgttacgacctccctgtccagactgacagagacggacgaccaattagccgcttcatggtc
agcagagggcggagcttccagcagatgttaaccaccctcatccatgaggtgaacatccag
ccttcagagtggcaccgctcccttctcctgcctcaggcatggcgcggctttttgagccgg
gcataccatggtgtcctacaggggcgtaaggccgagctggagatgctgcaaaagcaaggg
aaagagagtcctgaggagctgcagtataaacagcactgcgcctggctctgggtcagggac
cagctgactgatgtggtgaaggctgcagccaaggacagtcctgtggtccagggaaactgc
atccttgctctaagtggtcttgctgttgtcctgagccgccatgagagcagccttcctgcc
cagagcgatggacaagtcgaggttggtccagagatcctacccactgcccactggctgtat
atggtgattgacactctccttagcatcgtgagcagcagcagtcggcccaaaggacaagtt
ttcccctggtttgttcatcgttcatactcgggcgagaacacagccagtgccattgctcgg
tcctgtgctgcattgggcctggcaatgctagttcctgtcctggtcacctcacacagggac
gcagtgccctctatacaggacactttacaagcaggcctgcccggtgtgcccactgcagac
gactctcaagctgtgcagttccacagcggcttggcattaggtatgctgatggcctggctt
aatgaggagaaagtcagtgacattggtgggcagaccatgtgggaactgctgctgagctct
ttggagcatctggaatcatgctgtttcaacacccagctggaatataattctggctgtgtt
cttggtcttgggctgctactcagctctctctgtagcagcagtgacattgagcagcgaatg
cgtgtgtctgtctctctggacagacttcttcagagcttgcaggacagcgggagcatggga
cgcatgcagcaggaggttttggcatactctgtggcatgtgctggagtgtcagcgtttagt
tgtggtattattgatgccagtaaagctgaggaggtgatgaacactctgcgatccatgact
gaggagagccagcagactccaggcttggccctggctctgggcctcactgtgcatgggctc
tcgtccagcggccatggtaaaactgaggacctccaccctcgcctgctgtctgcgtggacc
aagatcctgctggcagagggctgtccgactatgcagaggctggcagctctgaatggagtg
atcgctttggtgggatctgagactgctttccttcagctcaggagtgaatcagagcagtcc
cctcagcaacagaacagactaaatgatgtcataagatctatcacacagatcatctctttc
tcaggaacaataggtctgcagtctaatggagcatgtctggtggctcacctgcatttggct
cacatgtccagcagccacagtagaactgcagtgcctcaagacttcagttatctcccagaa
aagagtatcctcagagcatcagtgttctatattactgaagctggaaggaaaggacctgag
actattgctcctgatttgataaaagtagtactggctccactggccacagtgggcactagc
ttccaatatccacctgttaactggagcgccatcctctcgcctctgatgagactcaacttt
ggtgaagaagtgcagcatcactgtttggagctggctgccaatcaggtacagacttcctcc
agtgcctcgctgttcctgggtgtgtggcttgcacctcctctggtccacagcctcagtcaa
cgcaccagagcactcctctatgaaagcctgtgtttctggatgaagcacatagcggatgat
aagctgcaggtgtatgtggagagtttggctgtacagcagtttaatccagaccaccgagct
cagcgtctttctctctgcctctccatcctgcatggccttgctaaggctatggctctaccc
aaccctgcccaaagctgctggactatcctgtgttccaccactgagaagatttttcacctt
ttacctgatcacatacaggcacatgaggtgaacctctatgaagggatctgttcctgtttg
tcagaaatgagcgacacagagatagacaggattgtcaaagtcactgaggccaatgtggag
aagaccacctttattctgtcctacttaagctcaaaaggcagaattccactcctgggcctc
aatgatgtcatcagtaccgttttacagaaggggaaaccagagcgaatcagctggctgcta
atgcagtgcttctaccagtcacgtttggcctctagccctaacacaggtgtgcccaaacga
atggaatggcttctggagttgatggggcacatcaggaaagtgctgtatggagcacctact
gtacaatatgataatgccaaaaagggcatcagtttcctgctggatgtttttgcagctgca
gtggtgtcatgggcagaccaccccatgcctcttctcattggcatccgagcccagtggttt
ccatggcaaaagtcatccaaacacatagacttgcctcatgacctctacgtgaacactgca
tccactgaggagtcagttaaacagtgtgtgctggcagtgtcatacagcctaaagcacctg
ttagccaaagagccatggaaggcccagtcccagaagttcattgactggctcttcagccta
accgaagctcctgaggaatctttatcgcagatagccagagcggccttactagcattgaag
tctaccccagagttcaagaagaagaccgtgtggacaagagcgtatggctggtga
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integrated database retrieval system
