Ictalurus furcatus (blue catfish): 128609995
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Entry
128609995 CDS
T09387
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128609995 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128609995 (dhx15)
03009 Ribosome biogenesis [BR:
ifu03009
]
128609995 (dhx15)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128609995 (dhx15)
Spliceosome [BR:
ifu03041
]
Complex A
U2 snRNP components
U2 related factors
128609995 (dhx15)
Complex B
128609995 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128609995 (dhx15)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
90S particles
Helicases
128609995 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128609995
NCBI-ProteinID:
XP_053484958
LinkDB
All DBs
Position
7:16974282..17009201
Genome browser
AA seq
770 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRDRDRDRERDRDRERDRD
GKAPNSALNLSAVSGGGMLPLKQTAIHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKER
FHEILTRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACTQPRRVAAMSVAQRV
ADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER
TLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTP
EPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKI
IPLYSTLPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK
VYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRS
NLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEF
PLDPQLAKMVIASCEYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHL
TLLNVYHAFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDY
YINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKN
YIRTCTDIKPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYTQY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgacatcgtttggatttaggcgatgattattcgtcgagtaaaaagagatca
tcagacggaaaagatcgtgacagagatcgagacgaaaggtcgaaggaccgggaccgggat
cgtgacagagatcgggacagagacagggagcgtgaccgagacagagagcgagatcgggac
ggcaaagctcccaactctgcccttaatctgagcgctgtgtctggaggagggatgcttcct
ctgaagcagacagccatccatcagcagatcaaccccttcaccaacctaccccacacgcca
cgctactatgagatcctcaagaagcgtctgcagcttcctgtctgggagtacaaagagcgc
ttccatgagatccttacacgccatcaaagctttgtgctggtgggcgagaccggctccggc
aagaccacacagatccctcagtggtgtgtggatatggtgcgctccctgccgggacctaag
cgtggagtagcctgtacccagccccgcagagtggcagccatgagtgtggcacagcgagtg
gcagatgagatggatgtcatgctgggacaggaagttggctactctatcagattcgaggac
tgcagctcggcaaaaaccatcctcaagtacatgactgatggtatgttacttcgagaggcc
atgaacgacccgctgctcgagcgatatggcgtaatcattctggacgaggctcatgagcgc
acgctggccacggacattctgatgggtgttcttaaagaagtcgttcgccagagagcagac
ctaaaggttattgtcatgagcgccaccttggatgccggaaagttccaggtgtactttgac
agctgccccttgctcaccatccccggcagaacacatcccgtagagatcttctacacacca
gagcccgagcgcgactacctggaggcggccatcaggacagtcatccagatccatatgtgt
gaggaagatgagggagacgttttactcttcctcacaggacaggaggaaatcgacgaagcc
tgcaagcggatcaaacgggaaatcgacgacctgggccctgaagtgggcgacattaaaatc
atccccctctactccacactaccaccacagcagcagcagaggatcttcgagcctccgcca
cctcgcaagcctagcggagccatcggtagaaaggttgtggtgtccacgaacatcgccgag
acgtcgctgaccatcgacggagtggtgtttgtaatcgatcccggcttcgccaagcaaaag
gtgtataacccacgcatcagggtggagtcactgctagtgactgcgatcagcaaagcatca
gctcagcagagggcaggaagagctgggcgtacgcggccagggaaatgcttccgcctttac
acggagaaggcgtacaagaccgagatgcaggataacacgtacccagagattctcagatcc
aacctgggctctgtagtgttacagctgaagaagctgggtatcgatgacctggtgcatttt
gacttcatggacccaccagctcctgagactctgatgcgtgctctggagctgttaaactac
ctggcagcgctgaatgatgatggagacctgaccgagctgggctccatgatggcagagttc
ccgctggaccctcagctggctaagatggtcatcgccagctgcgaatacaactgctccaac
gagatcctctccatcaccgccatgttatcagtcccacagtgctttgtgcgccccaccgag
gccaagaaggcggctgatgaggccaagatgaggtttgcccacatcgacggagaccacctc
accctgctcaacgtctaccacgccttcaaacagaaccacgagtcagtgcaatggtgctat
gataactttgtgaactaccgctcgctcatgtcggcagataacgtgcggcagcagctgtca
cgcatcatggaccgtttcaacctgccacggcgtagcacagagttcaccagtcgcgattac
tacatcaatatccgccgcgcgctggtcaccggcttcttcatgcaggtggcccacctggaa
cgtacagggcactatttgacagtgaaggacaaccaggtggtccagctgcacccgtccact
gtgctggaccacaagcccgagtgggtgctgtacaacgagtttgtgctgaccaccaagaac
tacatccgcacctgtacagacatcaagcctgagtggctggtgaagatcgctccacagtac
tacgagatgggcaacttccctcagtgtgaagccaagcggcagctggagcgcattgtcgct
aaactccaaaccaaggaatacactcaatactaa
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