Ictalurus furcatus (blue catfish): 128610002 Help Entry 128610002         CDS       T09387                                  Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism ifu  Ictalurus furcatus (blue catfish) Pathway ifu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ifu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     128610002  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:ifu04990]     128610002 Domain-containing proteins not elsewhere classified [BR:ifu04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    128610002 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 Motif Other DBs NCBI-GeneID:  128610002 NCBI-ProteinID:  XP_053484973 LinkDB All DBs Position 7:17689444..17716167 Genome browser AA seq 1513 aa AA seqDB search MSAQDYACVTVRGRAPWGFQLRQSDTESHRCVQVHQVEEGSHASIAGLCKDDELVSVNGV SCSSLSLAEVIVLIEKATDCLQLLVKRCCLYPQQKSQSVNTTLQASWKELREPYKSEHQV ETCYEETNSDTECPAGNTMVRTQFCIPAPKDRAGTDTFDSSDRGPRFEITPGAVVELQLS LSQTTLEDTGCTSLGSARGVKGDLCHQPNTENDECTTSAPGCSFYIPLHEREPLGQRGVL VSSPSALLGQVEVTIQPSGRESGTERVGAGGTEATANKQQDYAEGEGGYTDEDPTSFSVS FGIPSEEEDSESERELNKPNKHRARHARLRRSESLSEKQVKEAKSKCKRIALLLTTAAPN PNNKGLLMFKKHRQRAKQYTLVSYGTGENEPEFEDEDDDYNDKETHAVEFTVLATSETEI DEDFFTNSSGQKNIVTFDLDTGLLEIERKLHNQEDMNALPETKGKGALMFAQRRQRIDEI AAEHDEMRSKGIPVEGIQEAEKIYQQVNQHSCIQTNDSQNYTDVNVYHQQQPQQYEQYQE QHYQQQQQHQYQEYQQQMQYHQQQQYYQQQQECQQEQQNQPQQYQQQQQMQQYFNNMNGV SSHQTNVVRSSVINRSAKPFSVQNRAAAPFPPSLNQEQTYYSDGQGEQIATRDERISVPA IKTGILQDTRRKNKAKPMFTFKEPQKVSPNPELLNLLNRNDKKAGFDSGTEEDYLSLGAE ACNFLQSTKLKNKTPPPVAPKPHIHQVTPVWSPQPETANQQFQQDVENNIPVTTRDPVPE MESTVIPEEEPSTAPASDQHEASTKLRSEVQPEVINAWGLSETQIQLGQQIGTWHENPSQ PQLHAKPEPAVSSWGPSSTQALEQPPVTAWGPAELPSQVLAQNQSQMHPPWVTQSQILSE VEPPTSFQTQSQPQPSWVTQNQQQHQPHPQSQINTWVTAPIQSPHQPPWAQNQVPRQASV STWSQDLNQPQVQPSWTQQQQESQPIPPWTASQQHPQSPWNQPESQPQPQPTWVSQTQQQ TLPQPPVNTWNQSQSLVQTQPPWTHQAQPSSQPSAQMQQQQNPWTSVPTQLQPQPTWAQQ TQEHPQQTMNSWVPEQNKIQPPWNQPQSPTQAQPPWSHPPQQQTPLQSQFQTTLSTWTPQ PQQGPVITMGSTESQKLAQPSKPWSPPQTTQPPPPHQLNSNTPISKVPSQMPGMGSASRM GSAFEMPALRGKGAELFAKRQSRMEKYVVDSSTVQANKARSLSPSPSLPASWKYSSNCRA PPPLAYNPLQSPSFPLGAIKQPPSTSPTLKNKNKVTEKGKPAPKPLNVLDVMKHQPYQLN SSLFTYGPAAEKLAAEKETAEKFAVQEAAEARAQNQAQAQPQAPDPYSFISHQPQPPQQP YGIPVPSPAMHDGPYHHTPNSYQPTPNAYQQVPHQQIYNPPNACQQLPSNSYQQSPSIPY QQPPSYQAGQYPASQVPCYQPAPASYVVPTCPVAGRADSATGSSTLAAPKPKFSAKKSDA QVWKPSAAESVDK NT seq 4542 nt NT seq  +upstreamnt  +downstreamnt atgagcgcgcaggattacgcatgcgtgacggtgcggggtcgcgcgccctggggcttccag ctacgccaaagtgacacggagtcgcaccgatgtgttcaggtgcaccaggttgaagaaggc agccatgcatccatagctggtctgtgtaaggatgatgaacttgtgtctgttaatggagta tcctgctccagcctcagccttgcagaagttattgttctcattgagaaagccactgactgc ctacaactgctggtaaaaagatgctgtttatatcctcaacagaagtctcagtcagttaac accacactccaggcttcctggaaggaattgagggagccctacaaatctgagcatcaggtt gaaacatgttatgaagagacaaatagtgatacagagtgccctgcagggaacaccatggtc cgaacccagttttgcattccagctcccaaggatagagctggaacagacacctttgactct agtgatagagggcccaggtttgaaatcactccaggagctgtagtggaattgcagttgtca ctctctcagaccaccctggaagacacaggctgtacctcattaggaagtgctcgtggagtt aaaggagacttgtgccatcaaccaaacactgaaaatgacgagtgcacaacgagtgcacca ggctgctctttctatataccactgcatgagagagagcctctgggtcagcgaggcgtgctt gtcagttctccttctgctttgttgggacaggtggaggttaccatacagccatctgggagg gaatctggaacagaaagagtgggggccggtgggactgaggcaacagctaataaacaacag gattatgctgaaggagaaggagggtacactgacgaagatcccacctccttctctgtctcc tttggaattccatcagaagaggaggactctgagtcagagagggagctcaacaagccaaac aagcaccgggcaaggcacgccaggctccgccgaagtgaaagcctgtctgagaagcaggtg aaggaggccaagtctaaatgcaagcgtatagccctcctcctgactactgctgcccccaac cctaataacaagggtttgttaatgttcaagaagcataggcaaagggcaaagcagtacaca cttgtaagctacggaactggagagaatgagccagaatttgaggatgaagacgatgactac aatgacaaggaaacacatgctgttgagttcacagttctagccaccagtgaaactgaaatt gatgaagattttttcacaaattcctcaggccagaagaatattgtaacctttgatttggat actggactgcttgagatagagcgcaagcttcacaaccaagaggacatgaatgcactccct gaaaccaagggcaaaggagccctgatgtttgcacagcgcagacaacgtattgatgaaata gcagctgaacatgatgagatgagaagtaaaggtattcctgttgaaggtatacaggaagct gagaaaatctaccaacaggtgaatcagcactcttgcattcagactaatgacagccagaat tacactgatgtaaatgtgtatcaccaacagcaacctcagcagtacgaacaataccaagaa cagcattatcaacagcaacagcagcatcaatatcaagaataccaacagcagatgcagtac catcagcagcaacagtattaccagcaacagcaggaatgccagcaagagcaacaaaatcag cctcagcagtaccaacaacagcagcaaatgcaacaatactttaataatatgaatggtgtg tctagtcaccaaacaaatgtagtgcgatcatcagtcattaatagaagtgctaaaccattc tcagttcagaatagagcagcagccccatttcccccttctctgaaccaagagcagacgtat tattcagatggacaaggggaacaaattgctaccagagatgagcgaatttctgtacctgca ataaaaacagggatcttacaagatacaaggagaaaaaacaaagctaaacccatgttcact tttaaagagcctcaaaaagtttccccaaatccagagctgctgaatcttctcaacaggaat gacaagaaggcaggctttgattctggtacagaggaggattatctaagcttgggggcagag gcctgcaactttttacaatccactaaactaaagaacaaaactccaccaccagttgctccc aaacctcacatacaccaagttactcctgtatggtcaccacaaccagaaactgcaaaccag caatttcagcaagatgttgaaaataacatccctgtaactaccagggatcctgtccctgaa atggagtccacagtcataccagaggaagagccctccacagcacctgcttctgatcaacat gaagcttctactaagctccgctcagaggttcaaccagaagtgatcaatgcatggggtcta tctgagacacaaatacaattaggtcagcaaataggtacttggcatgaaaatccatcccag ccacagttacatgcaaagccagagccagctgttagctcttggggtccatcttcaactcag gctcttgagcagccaccagtaactgcttggggtccagcagagcttccatcacaagtcctt gctcagaatcagtcacagatgcatccaccttgggtgacacaatctcaaatcctttcagaa gtggaaccacccacatcttttcaaacacagtcacagccccagccttcctgggtgacacaa aatcaacaacaacatcaaccccaccctcagtctcaaattaatacatgggtaacagctcca attcaatcaccacaccaacccccatgggcccaaaatcaagtgccacgacaggcatctgtc agcacttggtctcaagatctaaatcaaccccaagtacagccatcctggacccaacagcaa caagaatctcaaccaataccaccttggacagcctctcaacagcatccccagtccccctgg aatcaacctgagagccagccacagcctcaaccaacttgggtctctcagacccaacagcaa accttgccacaaccaccagtaaatacatggaatcaatctcagagtctagttcaaacacaa cctccatggactcatcaggctcaaccatcctctcagccttcagcacaaatgcagcagcaa cagaatccttggacctcagtccccacccagttacaaccacaaccaacatgggcacaacag actcaagagcatccacagcaaacaatgaattcatgggtaccagagcagaacaaaatacag cccccctggaatcagccacaatctccaactcaggcacaacctccatggtctcatccacct cagcaacagacaccactacagtctcagtttcaaacaactttaagtacatggacaccacaa ccccagcaaggtccagtcattaccatgggttctactgaaagtcagaagctggctcagcca tccaaaccatggagtccacctcagaccactcaacctcctcctccacatcaactgaactca aatacacccatatcaaaggtaccttcacaaatgcctggaatgggttcagcctctagaatg ggttcagcttttgagatgccagccttgcgagggaaaggtgctgaactttttgctaagagg caatccagaatggaaaagtatgtggtggattcttctacagtgcaggctaacaaggcaaga tctttgtcaccttctccttctttaccagcctcatggaaatattcatctaattgtcgtgct ccaccacctttggcatacaatccactacagtcaccctcatttccactaggtgctatcaag caacctccctctactagccctacattaaagaacaaaaataaagtcacagagaaaggaaaa cctgcacccaaaccacttaatgttttggatgtcatgaagcaccaaccttaccaactaaat tcttcccttttcacctatgggccagcagcagaaaaacttgctgcagaaaaagaaacagct gaaaagtttgctgttcaagaagcagctgaagcccgagctcaaaaccaagcccaagctcag cctcaagctcctgacccctatagttttatatcacatcaaccccagccaccccagcagccc tatggtatacctgttccctctcctgctatgcatgatggcccttatcaccacactcctaac agctaccagcctacccccaatgcttatcaacaagtcccccatcagcaaatatataatcca ccaaatgcttgccaacaacttccttccaattcttaccaacaatcaccaagtattccctac cagcagcccccttcatatcaagctggccaatatccagcttcccaagtaccatgctaccaa ccagctccagcctcttatgtagtgcctacttgtccagtagcaggaagagcagattcagct acaggaagtagcacccttgctgctccaaaaccaaagttctcagccaaaaaaagtgatgca caagtgtggaagcctagtgcagctgaaagtgtagataaatag

DBGET integrated database retrieval system