KEGG   Ictalurus furcatus (blue catfish): 128610182
Entry
128610182         CDS       T09387                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04382  Cornified envelope formation
ifu04510  Focal adhesion
ifu04512  ECM-receptor interaction
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128610182 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128610182 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128610182 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128610182 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128610182 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:ifu00536]
    128610182 (col4a5)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128610182 (col4a5)
Glycosaminoglycan binding proteins [BR:ifu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128610182 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128610182
NCBI-ProteinID: XP_053485291
LinkDB
Position
7:complement(23159272..23209370)
AA seq 1680 aa
MNKKLKSLQNLVAVLLFISLSIGVQQSESAACHGCGTGSKCDCSGVKGAKGDRGFPGQSG
HAGVPGFPGPEGPIGPRGEKGDDGPPGPPGPKGIRGPPGLPGFAGTPGIPGLPGSDGPPG
PKGIAGCNGTKGEKGFPGNPGFPGLDGSPGLRGDPGQKGEPGEVISMEIPGTPGGPGSIG
LPGPRGDPGPPGLPGPSGPQGPRGYNGPPGPPGPQGPKGNMGLNFQGPKGDKGETGLKGP
PGPPGQVDQLIGEIDGVIHRGEKGDPGQPGPPGYPGPPGLPGPSDVKGEKGEPGEPGKRG
KPGKDGDPGPPGLQGAIGAPGDPGFPGRDGERGEKGERGLPGPPGVVTPPSLNQVGPKGD
PGLPGAPGRKGEPGLPGVQGPPGQPGQPGIGSQGLPGPPGYTGERGQKGDQGSPGASLPG
SPGRPGPQGFQGPPGPPGPPGISNGFENCLPGPSGLPGLNGEPGFPGEIGQKGEKGDTCV
NCFSSGNLIPGPQGPPGPAGPPGSPGLPGFKGDRGSPGSPGLMGPPGLQGQQGSPGLPGQ
KGDPGDAISLDGMKGDKGDTGFPGPPGLPGRDGAPGRNGPPGAPGPKGAPGSLMLKGERG
PPGEPGLQGPPGDRGLTGAPGFGPQGPSGEKGFQGVSGRQGLPGPPGQKGEPGQTVSEKG
APGPSGRNGEPGLPGNPGNPGQPGSPGFPGLPGQKGEPGLPGIGLPGPPGPKGFPGTAGT
PGSPGRPGPPGVDGLPGTPGFRGPKGEPGYGIPGPQGPPGLPGSKGFPGQKGDPGFPGNP
GAPGRPGIDGPPGYKGDSGLSGSPGAPGPQGPPGFGLPGLPGPPGLPGPMGNPGSPGLNG
EKGDPGSPGLDIPGLPGDPGSPGLSGQPGPPGLPGNPGNPGQDGLPGFPGQKGEMGVMGA
PGSPGNPGNPGVPGFPGPKGDNGQPGLPGNPGLMGTKGNKGEPGLRGPAGITDTSTVKGT
KGEPGLQGISGVPGPKGIPGLPGDPGIPGQDGRPGQPGPPGPKGDSGIPGTPGLPGPPGL
KGTMGEMGLPGPPGVKGSLGQPGRPGQPGSSGAPGFPGPKGDPGTPGFGQPGAQGPKGEP
GSPGIPGSAGTKGQQGPPGSPGIPGSPGAKGDPGLPGFQGAPGATGPKGLDGVPGAPGLA
GAPGRPGSPGPPGLSGAPGDKGQPGRDGIPGPAGLKGEPGIPGYGLPGPSGIPGMPGQKG
DPGFPGQPGSPGFPGPKGDIGPSGTIGSPGLQGPPGPLGQSIQGPKGNQGPPGPPGRGGP
PGPEGPRGPPGSGGVKGEKGYSGNPGSPGLPGQKGDTGPPGFLGPPGSPGTVGLKGDTGL
PGVIGFPGPKGQPGNPGGPGLRGDPGEPGPPGDPGEPGQAPAPIVVKGAQGPPGPPGPPG
SQGLPGEAGLEGLPGGPGSPGDPGPDGPPGFSGPSGRKGDQGPSGQPGQQGLPGPAGPDG
LPGPPGPPGLSSAAHGFLITRHSQSTDVPPCPIGTSLIYNGYSLLYVQGNERAHGQDLGT
AGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIQGENIKPYISRCA
VCEAPAMVIAVHSQTIQLPSCPQNWEPLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFR
SSPFIECHGRGTCNYYGNSYSFWLATVEQSEMFRKPQSETLKAGNLQTRVSRCIVCMKRT
NT seq 5043 nt   +upstreamnt  +downstreamnt
atgaataaaaagttaaagagtctgcagaacctcgtcgccgtgctactcttcatatctctg
tccataggggttcagcagtccgagtctgcggcatgccatggttgtggaactggatcgaag
tgtgactgcagtggagtgaaaggcgcaaagggtgatagaggattcccaggtcagtcaggt
catgcaggtgtaccaggattccctggaccagaagggccaattggacctcgtggagagaag
ggtgatgatggacctccaggaccacctggacctaaaggaataagaggacctcctggactt
ccaggatttgcaggaacaccaggaattccaggtcttccaggatcagacgggcctccaggt
ccaaaaggaattgcaggctgtaacggaaccaagggtgaaaaaggatttccaggaaatcca
ggtttcccaggtttagatggttcaccaggactacgtggtgacccaggacagaagggagag
cctggtgaagtcatctctatggaaataccaggaacaccaggaggtccaggaagcatcggt
ctgccaggccccagaggagatcctggaccgcccgggttgccaggtcctagtgggcctcag
ggtccaagaggttacaatgggccaccaggtccccctggtccacaagggccaaagggaaat
atggggctgaacttccaagggccaaaaggagataagggtgaaactggcttgaaggggcct
cctgggcctccagggcaagtcgaccagttaataggtgaaatagacggagtgattcatcga
ggagagaagggtgaccctggacaacctggaccaccgggatatcctggccctcctggatta
cctggtccatctgatgtgaagggagagaagggagagccaggagaacctggaaagaggggt
aaacctggtaaagatggggaccctggccctcctggacttcagggtgccataggagcccct
ggtgatcctggttttccaggaagagatggagaaagaggtgagaaaggtgagcgaggacta
cctggacctccaggcgtggtgacacccccatcactcaaccaagtaggacctaaaggagat
cctgggcttcctggagcccctgggaggaaaggagagccagggctacctggtgtccaagga
ccaccaggtcagccaggtcagccaggaatcggaagtcaaggcctacctggcccccctggt
tatacaggagagcgaggacagaaaggagatcaaggatcgcctggagcttctcttccaggt
tctcctggtagacctggaccacaaggtttccaaggccctccaggaccgccaggacctcca
ggaatatcaaacgggtttgaaaactgcctcccagggccttctggtcttccaggcctgaat
ggagaacctggtttcccaggagagataggccagaaaggtgaaaagggggacacgtgtgtg
aattgcttctcaagtggcaacctcatcccaggaccacagggtccaccaggacctgcagga
cccccaggcagtcctgggctccctggttttaaaggagacagaggatccccaggcagccct
ggtttaatggggccaccaggtttacaaggacagcaaggttcacctggactacccggacag
aagggtgaccctggtgatgcaatttcccttgatggtatgaagggagacaagggagacaca
ggattccctggccctccaggtctgcctggccgggatggagcacctggtcgaaatggacct
cctggagcgcctggtcccaaaggcgcacctggttccctaatgcttaaaggtgaacgtggt
cctcctggagagcctggtctccaaggtcctcctggagaccggggccttactggtgcccct
ggatttggcccacagggaccttctggagagaaggggttccagggtgtgtcaggaaggcaa
ggacttcctggacctccaggtcagaaaggtgaaccaggtcagactgtctctgagaaaggg
gcacctggacccagcggacgtaatggagaacctggtctaccaggaaatccaggtaaccca
ggccaacctggctccccaggtttcccaggattacctggccaaaaaggagaacctggtctc
ccgggtataggcttgccaggcccaccaggtcctaaaggattcccaggtactgcgggaact
cccggcagccctggcaggcctggacctcctggtgtggatggactgcctggtacacctggc
ttccgtggacctaagggcgaacctggttatggtatccctggccctcaggggcccccaggt
ttgcctggcagtaagggttttcccgggcaaaaaggtgatcctggattccctgggaatccg
ggtgcacctggccgacctggtatcgatggtccccctggctataaaggtgattctggtctt
tctggttcaccgggtgcacctggccctcaagggccccctggttttggtttacccggtcta
cctggaccaccgggacttccaggacctatgggcaatcctggttcccctggtttgaatggt
gagaaaggagaccctggttcgcctggactggatattccaggcttgcctggtgacccaggt
agccctggattgtctggacaacctggccctcctggccttcctgggaaccctggtaaccct
ggccaagatgggctacctggattccctgggcaaaagggagaaatgggcgtgatgggtgct
ccaggatctcctggtaatcctggtaaccctggtgttccaggatttcctggaccaaaaggt
gataatggtcagccaggtctgccaggaaacccaggtttgatgggaacgaagggaaataaa
ggtgaaccaggtctaagagggccagctggtatcaccgatacttctacagtaaaaggaaca
aagggagaaccaggacttcaaggaataagtggagttccaggaccgaaaggtattcctgga
cttccaggagatccaggtatccccggacaggatggacgccctgggcaacctggacctcca
ggtcccaagggagattccggaattccaggaacaccaggactccctggtcctccaggactg
aaaggcactatgggcgagatgggattgcctggccctcctggagttaaaggaagcctaggt
caacctgggcgacctggacagcctggatcttcaggagcaccagggttcccaggaccgaaa
ggagaccctggaacgccaggatttggccaaccaggagctcaaggacccaagggtgaaccc
ggctctcctggtatccccggatctgcagggacaaaaggtcaacagggccccccaggaagt
ccagggatacctgggagccctggcgcaaagggtgatcctggcctcccaggattccaaggt
gcacctggtgctactggtcctaaaggtctggatggagtcccaggtgcccctggtctagca
ggagcacctggaaggccaggaagccctggcccacctggtttgtcaggtgcacctggagac
aagggtcaacctggtcgtgatggtattcctggaccagcaggattgaaaggagagccaggt
ataccaggttatggactcccaggtccttccggcattcctgggatgccaggtcaaaaagga
gaccctggctttcctggccagcctggcagccctggtttccctggaccaaagggtgatata
ggaccctctggtacaataggtagccctggtctacaagggccccctggtcctctgggtcag
tccattcaagggcctaaaggcaaccagggtcctcctggaccaccaggaagaggaggccct
cctggcccagaggggccccgtggacccccaggttctggaggagtgaagggtgagaaaggc
tattctggaaaccctggatcacctggtttacctggacagaagggagacactggaccacca
ggttttttgggcccccctggatctcctggaactgttggacttaaaggtgacaccggcctt
ccgggtgttataggattcccaggacctaaaggtcaacctggcaatcctgggggtcctggc
ctgcgtggtgatcccggggagcctggtcctccaggtgatcctggtgagccaggtcaagcg
ccagccccaattgtggtaaagggtgcgcaggggcctcctggtccgcctggacccccagga
tcccaagggctaccaggagaggcaggactggaggggcttccaggtgggcctggtagtcct
ggtgacccaggtcctgatggtcctccaggattcagtggtccatctggaaggaaaggagac
cagggaccatctgggcagccaggtcagcagggtttacccggccctgctggtccagatggg
cttccaggtcctccaggtcctccaggtctgtcgtcagcagctcatggcttccttataacg
cgacacagtcagtctacagatgtaccgccatgcccaattggcacctctctcatctacaat
ggctattctctgctttacgtgcagggcaacgagagggcacatggccaggacctgggtacg
gctggaagttgtctacgtcgtttcagcaccatgcctttcatgttctgcaacatcaacaac
gtgtgcaactttgcttcccggaatgactactcctattggttgtctactcctgaacccatg
cccatgagcatggctcctatccagggagaaaacatcaaaccctacataagcagatgtgct
gtgtgtgaagccccagctatggtgatagcggtgcacagccagaccatccaactgccatca
tgtccacagaactgggagcctttgtggattggctattccttcatgatgcacactagcgca
ggtgcagagggctctggtcaggctctggcctcgcctggctcctgtctggaggagtttcgt
tcatctccattcattgagtgccacggccgcggaacctgcaactactacggcaactcctat
agcttctggctggccactgtcgaacagtctgaaatgttcaggaagccacagtctgagacg
ctgaaagcagggaatctccagacacgtgtgagtcgctgcattgtgtgtatgaagaggacg
taa

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