Ictalurus furcatus (blue catfish): 128610197
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Entry
128610197 CDS
T09387
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128610197 (gigyf1a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128610197 (gigyf1a)
Surveillance factors
Other surveillance factors
128610197 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
TT_ORF1
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
128610197
NCBI-ProteinID:
XP_053485328
LinkDB
All DBs
Position
7:complement(23896582..23931224)
Genome browser
AA seq
998 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDNKIPEDM
QDKVFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAIPASVARGRGS
VRGGRGRGRGESGFYQRSTEDGEVGFSRSVREIHRSQSWDDRGERRFEKPLRREGLRVGF
EEVASGGRKEFMRSDSDNWRTLREEQEQEEGGDPGGSWRLAGSRRDDGGPRSAGWREHGE
VRRKKFDFGSEGGRRRAGSEGAEDERDGLPEWCTDEEEGEMGTFDSSGAFMPIKKGSKDP
IPEEEFDFQGLEDEDECGTDGENKDGSFGDKAERDETDSAAVCEVEVKSLPPSSPSSMSL
IAPQAEPMPTAAPTCLEDPQPVPAMPSKMPSEVLSDPVSELSPSASSSLPSSPPSSSSAA
TDLPPTGGDPEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRNTAAALPLSHDS
AMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMWGRVPF
APGPSPPPLLCNLDQDRLKKQQEIATAALYQQLQQHQFFQLINRCGEQGMMPSMNRSLSV
PDTGSMWDMHTSASQPTGGEASLWDLTMNSSTQGPTLEQLQKLQERREAELRAKREEEER
KRRDEKRRQQQEEQKRREEEELFRRKQQELLMKLLQQAPRQGAASTGSGWSTGPVPGLGK
QGKSINSLEIQQDTERLYKQQQRAPQQRWATESLWSSSGMDGKAAGGSSPSGGSMGVWDE
ALKNQSALRSGMGLKNSRSSPSLSDQYMMMNRRKRTEDEDRLLKLLQGMKAQDGFTTWCE
QMLHALNTSANNSNSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAKEFAKQFLERR
AKQKANHQRQQQLSKEVGGLTMNSFPLQDSMRGMNPAALQSMFQAVHSGKGGMGYDQAGK
LKKKQPMMLHSDPSILGYSFHGAADRMSLSEMEMVEDY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagacactcaatttcggcccagaatggctccgtgcactttccagtggaggc
agtgtgacttcccctcctccctctcccgctatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatgtcaaagacaacaagatcccagaggacatg
caggataaggtgtttgctgctattctgcaggatgagcctcagcaacctctggcactggtg
cctctaactgaggaagaacagcggaatttttcgatgtctgtcaatagtgtggctgtgctg
aggcttatgggtaaagggggtggggccattcctgctagtgtggcccgtggcagaggcagt
gtgagaggtggccgaggcaggggccgtggagagagtgggttctaccaaagaagtactgag
gatggagaggtgggcttcagtaggagtgttagagagatccaccgtagccagagctgggac
gaccggggtgagaggcgctttgagaagcctctgcgtagggaggggttgcgtgttggcttt
gaggaagtggcctctggggggaggaaagagttcatgcgttcagacagtgataactggcgc
acactgcgagaggagcaggagcaggaggagggtggagacccaggaggcagctggagactg
gctggctcacgtcgagatgatggtggcccccgttcagcaggctggcgggaacatggtgag
gttcgccgtaaaaagtttgattttgggagtgagggaggaaggaggagagcaggaagtgaa
ggagcagaggacgagagagatggactgccggagtggtgcactgatgaagaagaaggagag
atgggtaccttcgactcctctggagcattcatgcccatcaagaagggttctaaggaccct
attccagaagaggagtttgattttcaaggtctagaagatgaggacgagtgtggtactgat
ggagagaacaaagacggtagttttggagataaagccgagagagatgagaccgactctgca
gctgtgtgtgaggtagaggtgaaatctctccctccctcctctccttcctccatgtccctc
attgctcctcaggccgagcccatgcccactgctgcccccacttgtctggaggatcctcag
cccgtacctgccatgcccagcaagatgccaagtgaagtgttatcagatcctgtgtctgag
ctgagtcctagtgcctcctccagtctgccttcatcccctccttcctcttcctctgctgct
accgacctcccaccaacggggggcgaccctgaggatgatgagggcatgaagcacctgcag
caggaggcagagaaaatggttgcagctcttcaggacacatctctggaggaagagtgtttc
acccaaacactgcaggagagcagaaacactgcagccgccctacctctctcccacgactct
gccatgaaatggttctacaaagatccacagggagagattcagggcccctttagcacagtg
gaaatgtgtgagtggttccaggcaggctacttcagcatgtctttgctggtgaagcgtggt
tgtgacgagggcttccagcctctgggagatgttattaagatgtgggggcgggtgcccttt
gcacctggcccctccccaccgcctctgctgtgtaatctggatcaggacaggctgaagaag
cagcaagagattgctacggctgctctctaccagcaactgcaacagcatcagtttttccaa
cttattaacaggtgcggagagcagggtatgatgccttcgatgaacagatcactgtcagtg
ccagatacagggtccatgtgggatatgcatacctcagcctcacagccgacaggtggtgag
gccagtctatgggacttaacaatgaattcttctactcagggtccaactcttgaacagctt
cagaagctccaggagagaagagaggctgaactcagggctaagcgggaagaggaagagaga
aaaagaagggatgaaaagaggagacagcagcaggaagaacagaagaggagagaggaggaa
gagctcttcaggcgcaaacagcaggagctgctgatgaagttactgcagcaggctccacgt
cagggggctgccagcacaggctcaggctggagcacaggcccagtgcctggactggggaag
cagggcaagtccatcaactcgctggagattcaacaggacactgagagactctacaaacag
cagcaaagagccccacagcagagatgggctacagagagtctgtggagttcttctggcatg
gatgggaaagcagctggtggcagcagtccctcaggaggcagcatgggggtttgggacgag
gccctaaagaaccagagcgccctccgcagtggcatgggcttgaagaacagccgcagtagc
ccctcactcagtgatcagtacatgatgatgaatcgccgcaaaaggactgaggatgaggac
cgcttactgaagctgttgcagggtatgaaggctcaggatggctttaccacatggtgcgag
cagatgctacatgcccttaacacctctgccaacaactccaactcctccctggatgtggca
actattgtggcatatctgaaggaggtggagtcaccgtacgaggtactggactttatccgc
tcctatctaggtgacactgtggaagccaaagagtttgccaagcagtttctggagcgccgt
gccaaacagaaagccaaccatcagaggcagcagcagctctctaaggaggtgggtggactg
accatgaacagctttcctctgcaggattctatgagaggtatgaaccctgctgctttgcag
tccatgttccaggcagtgcattctgggaagggagggatgggctatgaccaggcagggaaa
ctgaagaagaaacagcccatgatgctgcactctgatcctagcattttaggttactcattc
catggtgcagcggatcggatgagcctgagtgagatggagatggtggaggattactga
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