Ictalurus furcatus (blue catfish): 128610197
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Entry
128610197 CDS
T09387
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128610197 (gigyf1a)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128610197 (gigyf1a)
Surveillance factors
Other surveillance factors
128610197 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TT_ORF1
Motif
Other DBs
NCBI-GeneID:
128610197
NCBI-ProteinID:
XP_053485328
LinkDB
All DBs
Position
7:complement(23896582..23931224)
Genome browser
AA seq
998 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDNKIPEDM
QDKVFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAIPASVARGRGS
VRGGRGRGRGESGFYQRSTEDGEVGFSRSVREIHRSQSWDDRGERRFEKPLRREGLRVGF
EEVASGGRKEFMRSDSDNWRTLREEQEQEEGGDPGGSWRLAGSRRDDGGPRSAGWREHGE
VRRKKFDFGSEGGRRRAGSEGAEDERDGLPEWCTDEEEGEMGTFDSSGAFMPIKKGSKDP
IPEEEFDFQGLEDEDECGTDGENKDGSFGDKAERDETDSAAVCEVEVKSLPPSSPSSMSL
IAPQAEPMPTAAPTCLEDPQPVPAMPSKMPSEVLSDPVSELSPSASSSLPSSPPSSSSAA
TDLPPTGGDPEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRNTAAALPLSHDS
AMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMWGRVPF
APGPSPPPLLCNLDQDRLKKQQEIATAALYQQLQQHQFFQLINRCGEQGMMPSMNRSLSV
PDTGSMWDMHTSASQPTGGEASLWDLTMNSSTQGPTLEQLQKLQERREAELRAKREEEER
KRRDEKRRQQQEEQKRREEEELFRRKQQELLMKLLQQAPRQGAASTGSGWSTGPVPGLGK
QGKSINSLEIQQDTERLYKQQQRAPQQRWATESLWSSSGMDGKAAGGSSPSGGSMGVWDE
ALKNQSALRSGMGLKNSRSSPSLSDQYMMMNRRKRTEDEDRLLKLLQGMKAQDGFTTWCE
QMLHALNTSANNSNSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAKEFAKQFLERR
AKQKANHQRQQQLSKEVGGLTMNSFPLQDSMRGMNPAALQSMFQAVHSGKGGMGYDQAGK
LKKKQPMMLHSDPSILGYSFHGAADRMSLSEMEMVEDY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagacactcaatttcggcccagaatggctccgtgcactttccagtggaggc
agtgtgacttcccctcctccctctcccgctatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatgtcaaagacaacaagatcccagaggacatg
caggataaggtgtttgctgctattctgcaggatgagcctcagcaacctctggcactggtg
cctctaactgaggaagaacagcggaatttttcgatgtctgtcaatagtgtggctgtgctg
aggcttatgggtaaagggggtggggccattcctgctagtgtggcccgtggcagaggcagt
gtgagaggtggccgaggcaggggccgtggagagagtgggttctaccaaagaagtactgag
gatggagaggtgggcttcagtaggagtgttagagagatccaccgtagccagagctgggac
gaccggggtgagaggcgctttgagaagcctctgcgtagggaggggttgcgtgttggcttt
gaggaagtggcctctggggggaggaaagagttcatgcgttcagacagtgataactggcgc
acactgcgagaggagcaggagcaggaggagggtggagacccaggaggcagctggagactg
gctggctcacgtcgagatgatggtggcccccgttcagcaggctggcgggaacatggtgag
gttcgccgtaaaaagtttgattttgggagtgagggaggaaggaggagagcaggaagtgaa
ggagcagaggacgagagagatggactgccggagtggtgcactgatgaagaagaaggagag
atgggtaccttcgactcctctggagcattcatgcccatcaagaagggttctaaggaccct
attccagaagaggagtttgattttcaaggtctagaagatgaggacgagtgtggtactgat
ggagagaacaaagacggtagttttggagataaagccgagagagatgagaccgactctgca
gctgtgtgtgaggtagaggtgaaatctctccctccctcctctccttcctccatgtccctc
attgctcctcaggccgagcccatgcccactgctgcccccacttgtctggaggatcctcag
cccgtacctgccatgcccagcaagatgccaagtgaagtgttatcagatcctgtgtctgag
ctgagtcctagtgcctcctccagtctgccttcatcccctccttcctcttcctctgctgct
accgacctcccaccaacggggggcgaccctgaggatgatgagggcatgaagcacctgcag
caggaggcagagaaaatggttgcagctcttcaggacacatctctggaggaagagtgtttc
acccaaacactgcaggagagcagaaacactgcagccgccctacctctctcccacgactct
gccatgaaatggttctacaaagatccacagggagagattcagggcccctttagcacagtg
gaaatgtgtgagtggttccaggcaggctacttcagcatgtctttgctggtgaagcgtggt
tgtgacgagggcttccagcctctgggagatgttattaagatgtgggggcgggtgcccttt
gcacctggcccctccccaccgcctctgctgtgtaatctggatcaggacaggctgaagaag
cagcaagagattgctacggctgctctctaccagcaactgcaacagcatcagtttttccaa
cttattaacaggtgcggagagcagggtatgatgccttcgatgaacagatcactgtcagtg
ccagatacagggtccatgtgggatatgcatacctcagcctcacagccgacaggtggtgag
gccagtctatgggacttaacaatgaattcttctactcagggtccaactcttgaacagctt
cagaagctccaggagagaagagaggctgaactcagggctaagcgggaagaggaagagaga
aaaagaagggatgaaaagaggagacagcagcaggaagaacagaagaggagagaggaggaa
gagctcttcaggcgcaaacagcaggagctgctgatgaagttactgcagcaggctccacgt
cagggggctgccagcacaggctcaggctggagcacaggcccagtgcctggactggggaag
cagggcaagtccatcaactcgctggagattcaacaggacactgagagactctacaaacag
cagcaaagagccccacagcagagatgggctacagagagtctgtggagttcttctggcatg
gatgggaaagcagctggtggcagcagtccctcaggaggcagcatgggggtttgggacgag
gccctaaagaaccagagcgccctccgcagtggcatgggcttgaagaacagccgcagtagc
ccctcactcagtgatcagtacatgatgatgaatcgccgcaaaaggactgaggatgaggac
cgcttactgaagctgttgcagggtatgaaggctcaggatggctttaccacatggtgcgag
cagatgctacatgcccttaacacctctgccaacaactccaactcctccctggatgtggca
actattgtggcatatctgaaggaggtggagtcaccgtacgaggtactggactttatccgc
tcctatctaggtgacactgtggaagccaaagagtttgccaagcagtttctggagcgccgt
gccaaacagaaagccaaccatcagaggcagcagcagctctctaaggaggtgggtggactg
accatgaacagctttcctctgcaggattctatgagaggtatgaaccctgctgctttgcag
tccatgttccaggcagtgcattctgggaagggagggatgggctatgaccaggcagggaaa
ctgaagaagaaacagcccatgatgctgcactctgatcctagcattttaggttactcattc
catggtgcagcggatcggatgagcctgagtgagatggagatggtggaggattactga
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