Ictalurus furcatus (blue catfish): 128610241
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Entry
128610241 CDS
T09387
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
ifu03015
mRNA surveillance pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128610241 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
128610241 (acin1b)
03015 mRNA surveillance pathway
128610241 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128610241 (acin1b)
03041 Spliceosome [BR:
ifu03041
]
128610241 (acin1b)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128610241 (acin1b)
Spliceosome [BR:
ifu03041
]
Complex C
Other components
EJC/TREX
128610241 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
128610241
NCBI-ProteinID:
XP_053485404
LinkDB
All DBs
Position
7:25434250..25462628
Genome browser
AA seq
1531 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLESLQRTSTSH
PGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRMEREAREAAEADDTDSPAGPEEDDHTA
ANDSTSYTPDKHHVVASRPSVPEDGGGDQLGPPDPVALGGHRMDTSDASASHDSTDVPTA
KIWRPSFSQEEVATPSPPRAVASLSVRVVGQPERQGVPLIVPRPQQREGTAPVEAGPAHP
MPQLSQSARTQEDSDEDDDDDDDDSDEDDDWGPSARGRKNIHTPPAQRSRRKLQPPQHIP
PRHSPLQLRQPTPPPSPPPELSFPLPDTPKQSPPEQDEPEAPEGAAVSSPASLQRQESSS
SSRSSSPEPPSQRRPGPLSLLVRKMESEGAFDGGQKKDDEEEGDTTVATGEQVEAGPGVL
VFSRGANDVHTSCDSEVVPDHQDSPQEQLPGEPESLPTMPSITENSPQGSVEMKEAEGEQ
AKSSQPDEEEKQDDQEGCSEQKEKEKEAEESFNVSSWKREREESPPRDSADFRHTSPPPS
PPAPAKRARIFSEVPPPECLMSPSKPEQVSVLVSGPQHADADVEMETEAPAGVLQSSPIK
EHDKEMKEVKAEEQEPAEAHEAAEDISKPPSSLPPSPPPEEVEAEHERERSTESKREDSA
ERESEIPAERESEIPAVRESEIPVEKESEIAAEKEREVPAEKEIPADKEREIPAEKEIPT
EKEREIPAEKEREIPAEKEIPAEKEREIPAEKEIPSDKEREIPAERGRQRPAERGRQRSA
ASERQRSAERGRQRSAERGRQRSAERGRQRSAERGRQRSAERGRRRSAVSERRRSAERGR
QRSTERGRQRSAVSERQRSTDREGERSAEREKSRARHSSSSSQSSSSDSDSESSSSSSSG
SSPQDKPRPPSQNKDEEKKASSPDDPAEEKEKPLRDVKQATVAEPTGPVSMELQEQPESE
SALAHPASQEAPETSESRPDESTTPKAFAARKISLTTAKPEGAAVEAESGGGAGRKRRWG
SSTAVTAKKPSISITTESLKSLIPDLKPLQEAVVDLHPDEGRFSGDEDSSQQPERDEDQG
LQIRRTVTQVVPSESQENGQKEKEEDEDEEEEQPEGEKEKPPKKPRRESSSEVAMETQEG
DTKKVTPNDSVVRRSISQQKVAVSITIDDPVRTGRQLSPPRGKTSNIIHVCNLVRPFTLG
QLKELLNRTGAVVEDGFWIDKIKSHCYVTYASTEEAVATREALHGVKWPSSNPKVLRVDF
CEQKELDFHKGLLTGEDPRAVPAPNRPAAPPPLMPPTREKERERERERDGATTNVRDQWA
EREREMERRERTRSEREWDRDKVRDFTREEREAARRSRSRDRERRRKERGKSKEKKSEKK
DKPEEPPAKLLDDLFRKTKAAPCIYWLPLTEEQATQKSLERAERMKEREKRRKELQEEED
KKREEERKERARGRERDGGNAVSSGGGSSRPSEGEKDKERERERDRERERGREKEGEKRR
DSNRGRGNDSKPAGGSRRSRSHSNPSRDRRR
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaagatgttacgctagatgggaaaccgcttcattcgcttcgtgtggcg
gatttaaaagctgccttggagcaacgaggcctggctaaaagcgggcagaaaaatgcgctc
atcaagcgactaaaaggggcactcatgttggagagcctgcagcgaacctccacctctcat
cccggcctgcagcccaactcgcagataggggaggagatgagccagaacagttttattaaa
cagtacctggccaaacagcaagagctcctgcgtcagagaatggagagagaggcacgtgag
gcagctgaggcagatgatacagacagccccgcaggccctgaggaggacgatcacacagct
gccaacgacagcacctcttacacgccagacaagcatcacgttgtagcatctcggccctct
gtgccagaggatggaggaggtgatcagctgggtccaccggatccagttgctctgggaggc
cacaggatggacacaagtgatgcctcagcatcgcacgattccactgatgtacccacagcc
aagatctggcgcccctcgttctcccaggaggaggttgccactccctcacctccccgtgca
gttgcctctctttctgtgcgtgtggttggtcagccagagcgacagggcgtacccctgatt
gtaccccgcccacaacaaagagaaggaaccgcccctgtagaagcaggccctgcccatccg
atgccgcagctcagccagtctgctcgcactcaagaggacagcgatgaagatgatgacgac
gatgatgatgacagcgatgaagatgacgactggggtccttcagctcgtggaagaaagaac
atccacacacctccagcgcagcgctcgcggcgcaagcttcagccccctcaacacattcca
ccccgtcattctccactgcagctccgacagcccactcctcctccttctccccctccagag
ctctccttccccctgcctgacaccccaaaacagagtcccccagagcaggatgaacccgaa
gccccagaaggggctgctgtgtcctctccagcttccttgcagagacaagaatcaagctcc
agctccagatccagcagtcctgagcctccatcccagcgcaggcctgggccactcagcctg
ctggtgcgcaaaatggaatctgagggagcttttgatggtgggcagaagaaggatgatgag
gaagagggagacaccactgtggcaacaggagaacaggttgaggctggacctggggtgctt
gtattttctagaggagcaaatgatgttcacaccagctgtgattctgaggtggttcctgat
catcaagattcacctcaagagcagctgcctggggagcctgagtctctgcccactatgccc
tctatcactgaaaacagccctcaggggtcagtggagatgaaagaagccgagggggaacaa
gcaaaaagttctcagccagacgaggaagagaagcaagatgaccaggagggctgtagtgag
cagaaggaaaaggagaaggaggctgaggagagctttaatgtatcatcatggaaacgtgag
cgagaggaatcaccgcctagggattccgccgacttccgtcacacatcgcctcccccttcc
ccgcctgctcctgcaaaacgagcacgtatcttctctgaagttcccccacccgaatgcctc
atgtctccttccaaaccggagcaggtgtcagtccttgtgtcagggccgcagcatgcagat
gcagatgttgaaatggagactgaagctcccgctggagttcttcagtcctcacccataaag
gagcacgacaaggagatgaaggaggtgaaagcagaggagcaggaacctgcagaggcacat
gaagcagcagaagacataagtaagcctccttcgtcacttcctccatctccaccaccagag
gaagtggaagctgagcacgaaagagagagatctacagagagcaaaagagaggactctgca
gagagagaaagcgagatacctgcagagagagaaagcgagatacctgcagtgagagaaagc
gagatacccgtagagaaagaaagcgagatagctgcagagaaagaaagagaggtgcccgca
gagaaagagataccagcagataaagaaagagagattcctgcagagaaagagataccaaca
gagaaagaaagagagatacccgcagagaaagaaagagagatacctgcagagaaagagata
ccagcagagaaagaaagagagatacccgcagagaaagagataccatcagacaaagaaaga
gagatacccgcagagagaggaaggcagaggcctgcagagagaggaaggcagagatctgct
gcgagcgaaaggcagaggtccgcagagagaggaaggcagaggtccgcagagagaggaagg
cagaggtccgcagagagaggaaggcagaggtccgcagagagaggaaggcagaggtccgca
gagagaggaaggcggaggtccgcagtgagtgaaaggcggagatccgcagagagaggaagg
cagaggtccacagagagaggacggcagaggtccgcagtgagtgaaaggcagaggtccaca
gacagagaaggagagagatccgcagagagggaaaaatcacgtgcacgacactcatcctcc
tccagccagtcttcatcctctgactctgattcagaatcctcttcctccagttcctcaggc
tcctccccacaggacaaacccaggccacccagtcagaataaggatgaagagaagaaagca
agcagcccagatgatccagcagaggagaaggaaaaacctttgagggatgtaaagcaggcc
acggttgccgagcccacaggtcccgtctctatggagctccaggaacaacctgagtccgag
agtgcactggctcatcctgcctcacaggaggcgcctgagaccagcgagtcccgtcccgat
gagagcaccactccaaaagcctttgctgcacgcaagatttcacttacgactgctaagcca
gagggagcagcagtggaggcggagtctgggggcggggctggcaggaagaggcggtggggc
tctagtacagcagtcactgccaaaaagccctcaatcagcatcaccactgaatcactgaag
tctttaatcccagaccttaagccgctgcaagaggccgtcgtggacctgcacccagacgag
ggtcgtttctccggggacgaggactcaagtcagcagcctgagcgtgatgaggaccagggg
cttcagatcagacgtactgtaacacaggtggttccatctgaaagtcaagagaatgggcag
aaagaaaaggaggaggatgaagacgaggaggaagagcagccagaaggagagaaagagaaa
cccccaaagaaaccaaggagggagagctcatcagaggttgccatggaaacacaggagggt
gacactaagaaggtgacccctaacgactcagtggtgcggcgctccatcagtcagcagaaa
gtggctgtgtccatcaccatcgatgacccggtgcgcacaggccgtcagctctcacctccc
cgtggcaaaacatccaacatcatccacgtctgcaacctggttcgcccctttactttaggc
cagctgaaggagctgttgaatcggaccggtgcggttgtggaggacggcttctggatcgat
aaaatcaaatcccactgctacgtcacctatgccagtacagaggaggctgttgcgacacgt
gaagctctccacggcgtgaaatggccctctagcaaccccaaagtgctccgtgtggacttc
tgtgagcagaaggagctggacttccataaagggctgctgactggtgaagatccacgagct
gttccagcccctaaccgccccgcagcccctcctccactcatgcccccgacacgggagaaa
gagcgcgagcgtgagcgcgagagagacggagcaactacgaacgtgagggaccagtgggcc
gagagggagcgagagatggagcgcagagaaaggacacgatcggagagggagtgggacaga
gacaaggtgcgagacttcaccagggaggaaagggaagcagccaggagatcacgatcgcgt
gaccgggagaggagacgcaaggagcgaggaaagagcaaagagaagaagtctgagaaaaag
gataaaccagaggagcctcctgccaaacttctggatgatctgttccgcaaaaccaaagca
gctccatgtatttactggctgccacttactgaagaacaggcgactcagaagagcctggaa
cgagcggagaggatgaaggagcgggagaagaggaggaaggagctccaggaggaggaggac
aagaagcgcgaggaggagaggaaggaaagggcacgaggccgagagagagacggggggaac
gcggtgagcagtgggggaggctcaagccgtccatctgaaggagagaaggacaaagagagg
gagagggaaagagacagggagcgggaacggggtagagagaaagagggagagaaaaggaga
gacagcaacagaggccgaggcaacgactccaagccagcggggggcagcagacgctcacga
agccacagcaatccctccagggacagaaggcgttga
DBGET
integrated database retrieval system
