Ictalurus furcatus (blue catfish): 128610685
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Entry
128610685 CDS
T09387
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128610685 (nop2)
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
128610685 (nop2)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128610685 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
128610685
NCBI-ProteinID:
XP_053486080
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All DBs
Position
1:complement(17298009..17308219)
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AA seq
728 aa
AA seq
DB search
MGRKLDPTTKVKRGPGRKARKQKGAEIELAKLLVNEDEPKKLSSRGRKRAVKRAQGATAR
TEEKQPKKGFSDDNSKWLTPAKRKRKIDHSEGDDDSDSQWEQEEDNEDEVEDIEQGVKEQ
LEADDDDDDDMVDDYGAMEDSSEEQEQEDEAAGSDGEELLPIEQAARKQKKRQEAAAPES
EDEDDDDDEEEDDEKMDDEQEKEEEQDTVQANIDHMDRFKLPSAEEKDKEGHLLLDLQSV
HQRIKDNVDVLSHFTEKREEGRTRSEYLSLLKSDLCTYYSYNDFLMGSLMELFPNAELID
FLEANEVQRPVTVRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATP
EYLAGHYMLQGASSLLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGVIVANDANA
ERLKSVVGNVHRLGVTNTIICNYDGRAFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSK
DTSDILRSAHLQKELILAAIDSVNADSQKGGYLVYCTCSITVEENEWVVDYALRKRNVKL
VPTGLDFGKEGFTRFKERRFHPSLKLTRRFYPHSHNMDGFFVAKLKKFSNTIPTSPAVDE
ENGKASETETPATSEEKNSKPESKQQSKRTQGNVKETKQQSKAASNSKTESPNAKKKPVV
KGKKLKDEGPKKKRAKMDEQNSKEGKTKEKLQALKIHKDITNESVTEKAEGSLLKKKTNK
KNQKKLFK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagctcgatcccaccaccaaggtgaagcgtggacctggacggaaggcacgg
aaacagaaaggcgcagagatcgagctggccaaacttttagtcaatgaggatgagcctaaa
aaactgtctagcagaggcagaaaacgtgctgtgaagagagcacagggtgccactgcacgc
acagaagaaaaacagcccaagaaaggattctctgatgacaacagcaaatggctgacacca
gcaaagcgaaagcgcaaaattgaccattcagaaggggacgatgacagcgacagccagtgg
gagcaggaggaagacaatgaggatgaagtagaggatatagagcaaggagtaaaagaacaa
cttgaggctgatgatgatgatgatgatgatatggtcgatgactatggagcgatggaagat
agcagtgaggaacaagaacaggaggacgaggcggcaggcagtgatggagaggagctgcta
cctattgaacaagctgccaggaaacagaaaaaacgccaggaagctgcagcaccagagagt
gaagacgaggacgacgatgatgatgaggaggaagatgatgaaaaaatggatgatgaacag
gagaaggaagaagaacaggacacggtgcaggcaaacattgaccacatggacaggtttaaa
ctgcctagtgcagaggagaaagacaaagagggacatttgcttctagacctgcagagcgtc
caccagaggatcaaagacaacgtggatgtgctctctcacttcactgagaagagagaggag
gggagaacgcgatcagagtacctctcactgctgaagtcagatctctgcacatactacagc
tacaacgacttcctcatgggcagtctcatggagctgtttcctaacgctgagctcatagat
tttctggaggccaatgaagttcagaggcctgtcacagttaggaccaatacccttaaaacc
aggaggagagacctggctcaggctctgatcaatagaggagtaaatctggatcctttgggg
aagtggtctaaagtgggactggtcatctttgattcctcagttcccataggtgcaactcct
gagtatctagctgggcactacatgctgcagggagcgtcgtcactgcttcctgtaatggcg
ctctctccccaggagggggagtctgtgctggacatgagtgcggctcctggagggaagacc
acatatatggcccagctgatgagaaacacaggagtgatagttgctaatgatgccaatgct
gagaggcttaaaagtgttgtgggaaacgtccatcgcctgggagtcaccaacaccatcatc
tgtaactatgatggcagagcatttcccaaggtgatgggaggttttgacagagtgttgttg
gacgctccttgctcaggtacaggggtcatctctaaagatccagcagtgaaaactagcaag
gacacttcagatattctgcgctcggctcatctacagaaggagctgattctggctgccatt
gactcagtcaatgctgactcacagaagggtggctatcttgtctactgcacctgctctatt
acggtggaagagaacgagtgggttgtggattatgccctaaggaagagaaatgtaaaactg
gttcccacaggattggactttggcaaagaaggcttcaccagatttaaagagcgacgtttc
cacccttcacttaagctgactcggagattctacccacattcccacaacatggatggcttc
tttgtggcaaagctgaagaagttctctaacaccatccccacttcacctgcagttgatgaa
gagaacggaaaggccagcgaaacggaaacacctgctacatcagaggaaaaaaactccaaa
ccagagtctaagcaacagagcaaacgtacacagggaaatgtcaaagagaccaagcaacaa
tcaaaagctgctagcaacagcaaaactgaaagccccaatgccaagaaaaagccagtggta
aaaggtaaaaaattaaaggatgaaggtcccaaaaagaaaagggcaaaaatggatgaacag
aattcaaaggaaggcaagaccaaagaaaagctccaagccctaaaaatacacaaagacata
acaaatgagtctgtgactgagaaagcagagggaagcttgcttaagaagaagacaaacaaa
aagaatcagaagaagctttttaaatga
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