Ictalurus furcatus (blue catfish): 128611038
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Entry
128611038 CDS
T09387
Symbol
limch1b
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128611038 (limch1b)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
128611038 (limch1b)
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GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
128611038
NCBI-ProteinID:
XP_053486231
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All DBs
Position
8:complement(1750096..1824757)
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AA seq
1147 aa
AA seq
DB search
MASPGSDARRQLHPQHPHSEAAPEPAVREARKWIKAVTGRSFGEDFRGSLDNGILLCELL
SSIKPGLVKKINRLPTPLASQDNLVLFLKGCEELGLKGSQLFDPGDLQDTRTTRGSDCNK
RLKNVLITIYWLGRAANSSATYNGPTLDLHEFEGLLSQMRKEVEDWDSPKRSIRDSGYID
YWESERSDSLSPPRHARDDSFDSLDSIGSRSRHTPSPDGLFARSSSDGRGSDSECDIPYR
KLPDMRRDDMLARRTSCSEPRTAVPFNQYLPNKSNQTSYVHIPLRRQRTEREESCKSWSN
ATSPVGGERSFRFGRSDSVFDDPESMSMIDVRTDDDGLLPPHSQVRHELMHGQYTRMKEE
DSQWQDDLARWKSRRRSVSQDLIKKEEERKTMERLLSRDEGSQRRKSFKTYREIVEDKER
RERELHEAYLKARTPEEAAAVLQRYALRFTISEAVLERLKLPRVLERSISADPTRSSSLS
NDPVFSSSSSSSPSSSSNPLQYLRQQSLPAQKFTTTVQARVTGYGAEDVAVGREGGGSGA
ACSSRSIPLLSAKPYSHDRAAKQDEMERVNGETDNDHNAGDEREWRIETEREDGDQREHT
GDSSPLLFYPSPSQNVDSDSTEIEVSDSLSSDKQAISHTLTHTPELDAADFVSVEGRSVV
PGPERQEEEDTQKEGALSQPTSLPTQTQPEEEAVPQSRSIPPTQKQKEYQTEENEKCPED
HPVESSDPDSVRQTEQDTRASSHINVTDNQVSKPVPEPSERTANPPAPSSLDRPTPKFIT
GLPITELADSAQLATLSSNPKLRWDFFTSPEPVEKHDGNVAPTVLNLVQRGERFSWDPEE
ERKRQERWQQEQERMLQLKYQREQQRLKQEWERAQKEVEEEERRYHEEERRILEETAAPL
TPNSPLASSPCFKESSHTQNSIVRDWEREQVRLEKQMMETLENARKMENGRKEATRTKEE
HSQTSERPQKPSCDQIQAQPNGQRGGGAEGPNQVPKQPHTSQDASWSSKQHQQRPSSDPW
QKPASQDTNRNIQPAPGSRRRSGSIENAGAKSSQSISHTDTQQPPSPNRSVSGKKLCSSC
GHPLGKGAAMIIETLSLYFHIQCFKCGVCKGQLGDTSTGTDVRIRNGLLNCHQCYIRSRS
AGQPTNL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggccagccctggttcggatgctagacgacagctccatccgcaacatccgcacagcgaa
gccgcccccgaaccggccgtgcgcgaggcccggaaatggataaaggcggtcactggcaga
agtttcggggaggatttcagaggcagtctggacaacggaatcctgttgtgcgagttgctt
agttcaattaagccaggccttgtgaagaagatcaacaggttgcctactcctctagccagc
caagacaacttggtgctctttctgaaaggctgcgaggagttgggattgaaaggctctcag
ctgtttgacccaggagatcttcaggacacacgcaccacccgaggctcagactgcaacaag
aggctgaaaaatgttctgatcacaatctattggctgggccgggcagccaatagcagtgcc
acttataacgggcccactctggatctacatgagtttgagggactgctctcacagatgcga
aaggaggtagaggactgggacagcccaaagcgcagcattagggacagcggttacattgat
tactgggagtcagagcgcagtgactctctgtcgccgccgaggcacgcgcgagacgactcc
tttgacagtctggactccatcggctcccgctcgcgccacacgccctctccggacggcctg
tttgcccgcagctccagcgatggccgtggcagcgactctgagtgtgacatcccctacagg
aagctaccggatatgcggcgggatgacatgctggcgcgacggacatcatgcagtgagccg
cgtactgcggttcccttcaatcagtacctacccaacaagagcaaccagacatcgtacgta
catattcctctgcgtagacaacgcaccgagcgagaggagagctgcaagagctggagcaat
gccacctcgcccgtaggaggagagaggtctttcagattcggccgcagcgatagtgtattt
gacgaccccgagagcatgagtatgatcgacgtgaggaccgacgatgacggcctgctgccg
cctcacagtcaggtccgacacgagctgatgcacggccagtataccaggatgaaggaggag
gatagccagtggcaagatgacctggcgcggtggaagagtcgcaggagaagtgtctctcaa
gacctgataaagaaagaggaagagaggaagacgatggaaagactgctgagccgagacgaa
ggctcgcagaggcggaaaagtttcaagacctaccgagagatcgtggaagacaaggagcgt
cgtgagcgggaactccatgaggcttacctgaaagctcgaaccccagaggaggcagctgct
gtactacagcgctacgccctgcgcttcactatcagcgaagctgtgctggagcgcctcaag
ttaccccgcgttctggagcgcagtatctctgctgaccccacgcgttcctcatctttgtcc
aacgaccctgttttctcttcttcttcttcttcttctccctcctcgtcctccaatccactg
cagtacctgcgtcagcagtccctgcccgcacaaaagttcaccaccaccgtgcaggcccgg
gtgacgggatacggggcggaggatgtggcagtggggagggaaggaggaggttcaggggca
gcttgttcaagcaggagcatcccattgctcagtgccaaaccctacagccatgacagagca
gccaagcaggatgaaatggagcgagttaatggggaaacggacaacgaccacaatgctgga
gacgagcgagaatggaggattgagacagaaagagaagatggggatcaaagagaacacaca
ggagattcttctcctttgctgttttatccgtctccttcccagaacgttgactcagacagt
acagaaatagaagtgtcagactctctgtcctcagacaaacaagcaatctcacacacactg
acacacactccggagttagacgcagcagacttcgtgtcagtagaggggcgtagcgtggtg
ccaggacctgagagacaggaggaagaagacacgcagaaagaaggagcacttagtcaaccc
acctccttacccacgcagacacagcctgaagaagaggcagttccacagtccaggagtata
cctcctacccaaaaacaaaaagagtaccaaacagaagagaatgagaagtgtcctgaagat
catccagtggagagttctgaccctgactcggtccgtcagaccgaacaagacacacgtgcc
tcatctcacataaacgttactgataaccaggtcagtaaaccagttccggaaccctcagag
agaactgcaaacccgccagccccatccagtctagatcgtcctacgcccaaatttatcacc
ggactccccataacagagctggccgacagtgcccagctcgcaacgttgtccagtaaccct
aagttacgctgggacttcttcacttcaccagaacctgtcgagaaacacgacggaaatgtc
gctcctacggttttgaatctggtgcagcggggtgagcgcttttcgtgggatcccgaggaa
gagcgcaaacggcaggaaaggtggcagcaagagcaggaacgcatgcttcagttgaagtac
cagcgtgagcagcagaggctgaagcaggaatgggagagagcccagaaggaagtggaggag
gaagagagaagataccacgaagaggaacgtaggattcttgaggaaacagcggctcctctg
acgcccaactctcccctggcgtcttctccctgctttaaggaatcttctcacacacagaac
agcatcgttcgtgactgggaacgcgagcaagtgcggttggagaaacagatgatggaaacg
ttggagaatgcgaggaaaatggaaaatgggaggaaggaagcaacaaggacaaaggaagag
cactctcagacatcggagcgtcctcaaaagccaagctgtgaccagatacaggcccagcct
aacggacagcgaggaggaggcgcagaggggccgaaccaggtccctaaacaaccgcacacc
agtcaggatgcctcatggagcagtaagcagcatcagcagcggccatcatcagatccctgg
caaaagcctgcttcccaggacactaacagaaatatccagccagcacctggtagtcgtaga
aggtccggctccatagaaaacgctggtgcaaagtcatcacagtccatctcacacacagac
acacaacaacctccatcgccaaacagatctgtgagtgggaagaagctgtgctcaagttgt
ggtcatccactgggtaaaggagcagccatgattattgagacgctcagcctttacttccac
atccagtgctttaagtgtggggtttgtaagggacagctaggtgacacctccacaggaacc
gacgtaaggatcaggaacggtctgctcaactgtcatcagtgctacatccgctctcgttct
gccggtcagcccaccaacttgtga
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