Ictalurus furcatus (blue catfish): 128611079
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Entry
128611079 CDS
T09387
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128611079 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128611079 (atrx)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128611079 (atrx)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128611079 (atrx)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128611079 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128611079
NCBI-ProteinID:
XP_053486301
LinkDB
All DBs
Position
8:complement(3675444..3728753)
Genome browser
AA seq
2086 aa
AA seq
DB search
MSTENGSKLTALVTKLHEFLDHSPEEETAASEVNEISSDKMASSDSNINDEIMEKPSCST
DVPKATPRSKRKPAVVTKHTVVNEPESADEREQDCVADNTDDAAVMEEIPEDVVIVKPEP
VNTEGKDEFKGPEFRNKGGSKVKEEGQRRRPDEHLQEIRCSRVNCTACGQQVNHFQRDSV
YQHPILKVLLCKSCFKYYTSDDISKDDDGMDEQCRWCAEGGNLLCCDYCSNAFCKTCILR
NLGRKELSGIMNDDDKWRCYVCQPEPLQDVVAACEKVLRNLECMKKPKGDHDKLRRDGTK
HKRGKVKNTALNGKDANSDGSGTLTFSYKTLKVPKELLKKTKKLIETTNGLNSTFVQFIQ
QEPVYLGDSVVRHRHLKAFRSVLADLKKVHTTLEEALDAEFRDLEVQNGEGNGLADNASV
AHAVPNSEHVDQSNNDDQVVLDGAVDQVAASSEDYADEENVVPADVEMTEEAVPSAENPE
DAAVENEASASKVLKSEPDRDDDGSAAGEASLDKDIVSVPPSVPEELFEMVERLSDCVKQ
EGEKDSLDSTDSTSSKTSLSDRKSPESGKKSAKVGKKLIVKLTPIPLKITIKKEDSKSQS
KEKDGALSPDESRRSPRMKTTPLRKSSEGRSKSRSDGARANVKDEDRGATLQIPVSIGPS
DSDSDEVPEVLRQVEAMEASSDEREAEPNGKAAGDDKAEKSVEQPAEKSAKRKLIPSSSD
SDAGAKSSKTKKRAAKKKKGKESNSSNHDSDLEKEIKSLSKLSTTKRSSKRGKKQANEGK
KDGEDRKNTKEEDEGEEEEDNESKKVEGESKKEGKKGPKRSFERKRRSKRGKENAPRDSS
SSEEEEEQAADSGEDSSDQQKIKPILDSAMPHMDAFHQSSGDEAQLKEEPSRMVDDDDDP
ENRIAKKMLLAQIKANYSSGDDSSSEDEDCKKDTEEKSSAKAKNDGSSEGEEEEEDSDSG
SEVDVKKAGRRHKLLRKKLTLSEGESDNDKPSKSNKEAKRRGRRKVSSDESADSDFKRSA
SGSSSESALSEEVSEDDEDSKSNKRRTRSSKKTEKDGERSYQKEKKKKRRRIKVQDDSSS
NKSAEEGDEEDGEGDDEKGTPKGRKKIRKILKDDKLRSETQNALKEEEERRKRIAEKERL
REKLRETIVVEESSQIACPITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFIWD
CCCESVKKTLKSAGSGCILAHCMGLGKTLQVVTFLHTVLLCEKLNFSTALVVCPLNTVLN
WLNEFEKWQEGLKDEESLEVTELATVKRPQERAYALQRWHEDGGVMIIGYEMYRNLTQGR
NIKSKKLKETLQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIKTRRRVVLTGTPLQN
NLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTMVDVRIMKKRAHILYEMLAG
CVQRRDYTALTKFLPPKHEYVLAVRMTPIQCKLYRYYLEHFTGVGSALEGGRGRAGTKLF
QDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASETEESSMSLTSEDEKPKRKK
KRGKGKGESSDKSDSDDVEVIKEWNTSSRGGNPEGRNRAEPVEEVRPSNSGPGSPSPDWY
KEFVTEADAEVLEHSGKIVLLFEILRMAEDVEDKVLVFSQSLISLDLIEDFLELAGRAKE
EGKPSPYKGEGKWFRNIDYYRLDGSTNAITRKKWAEEFNDTSNVRGRLFLISTRAGSLGI
NLVAANRVIIFDASWNPSYDIQSIFRVYRFGQLKTVYVYRFLAQGTMEDKIYDRQVTKQS
LSFRVVDQQQIERHFTMNELTELYSFEPDQLDDPSEKKSKRSTPMLPKDPILAELLQNFK
DQIVGYHEHDSLLDHKEEEALSEEERKAAWAEYEAEKKGLSMRFNQPAYPSVGIGGSSNY
FPFNVAALASMSNQQLEDLINQGRQKVLEATNALKSLPREPLEDIVGQVWKENPSLSEAQ
VQGMALARQATIDMELKHREAVYRDILNKQQTLMMYVQKVIANRKVQEQQLALARQGILM
NQLALQNGIAGGMSQMELLGLYQQLGALQGLPTSQIGKNPGPSKGL
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaaacggcagcaagctgactgcactggtgacgaaacttcatgagttcttg
gatcattctccagaggaagaaactgctgcgtccgaagttaatgaaatctccagtgataaa
atggcctccagtgactcaaacatcaatgatgaaataatggaaaagcccagttgttccacc
gacgttccaaaggccacgccacgctcaaaaaggaaacctgcggttgtaacgaagcataca
gttgtaaacgagcccgagtccgcagatgagcgtgagcaagattgcgtcgccgataatacc
gacgatgccgcggttatggaagagatcccagaagacgtggttatagtgaaaccagaaccc
gtcaacaccgaaggaaaagatgaattcaaaggcccggagttccgtaacaagggagggagc
aaagtcaaagaagagggtcagaggaggcgtcccgacgagcatcttcaagagattaggtgc
tcaagagtcaattgcactgcgtgtggccagcaagtcaatcatttccagagggactctgtg
tatcagcatcctatactcaaagttcttctctgcaaatcctgtttcaagtattacacgagt
gacgacatcagtaaggacgacgacggaatggacgaacaatgcaggtggtgtgctgaagga
ggtaatctcctttgttgtgattactgtagcaacgcgttttgcaaaacatgtattctgcgc
aacctcggacggaaggaactctccggtatcatgaacgacgacgataagtggcgttgctac
gtgtgccaacccgagccgcttcaagacgtcgttgcggcttgtgagaaagtcctgcgaaac
ctggagtgtatgaaaaagccgaagggggaccacgataaactgagacgtgacggcacgaag
cacaaacggggcaaagttaaaaacacggctctgaacggaaaggacgcgaattccgacgga
tcggggacgctgaccttttcctataaaaccttaaaggttccgaaagaactgctgaaaaag
acgaagaaactgatcgagacgacaaacggcttgaacagcacgttcgtgcagttcatccag
caggaaccggtctaccttggcgacagcgttgtccgacacaggcatttgaaagcgttccga
tccgttttggccgacttgaaaaaggtccacacgactttggaggaagcgctcgacgcggag
ttcagagacctggaggtccagaatggagaggggaacgggttagcagataacgccagcgta
gcccacgcggtccccaactctgagcatgtcgaccagagtaataacgacgatcaggtggtt
ttagatggcgccgtagatcaggttgcagcttcgtcggaggactatgcggacgaggaaaac
gtagttccggctgacgtagaaatgacggaagaagcagtaccctctgcggaaaatccagag
gacgcggctgtagaaaacgaagccagtgcttcaaaggttttgaagagcgaacccgaccgt
gacgacgatggctcagcagccggagaggcgtctcttgacaaagacattgtgtctgtacca
ccgtctgttcctgaggaactctttgagatggttgagagactttcagattgcgtaaaacaa
gagggtgaaaaggactccctcgattctacagacagtacatcaagtaagacctcgctgtct
gacaggaagtcaccagaatctggtaagaagtctgcaaaggtgggtaaaaaacttatcgta
aagctcacccctatccctcttaaaattaccattaagaaagaggacagcaagtcacagtcg
aaagagaaggacggtgctctgtcaccagatgaaagcagacgttcccccaggatgaagacc
actcctctgcgcaagtcgtccgaagggaggagtaagagtaggtccgatggtgcgcgagcg
aacgtgaaggacgaagaccgcggcgctactttgcagattccggtttccatcggtccgtca
gactccgactccgacgaagtccccgaggtccttcggcaggtagaagccatggaggccagc
tcggatgaacgggaggcggagcctaacggcaaggccgcgggcgacgacaaagcggaaaag
tcagtcgagcaacccgcggaaaagtcggcgaagcgcaagctcatcccgtcctcctcggat
tcggacgcaggcgcgaagtcgtccaaaacgaagaaacgggccgccaaaaaaaagaagggt
aaagaatccaattcgtcaaaccatgactcggatctcgagaaggagatcaagagtttaagc
aagctgagcactacgaagagatcgtctaaacgaggcaagaagcaggcgaacgagggcaag
aaggacggggaagaccgcaagaacacgaaggaggaggatgagggcgaggaggaggaggac
aatgagagcaagaaggtagaaggtgagagcaagaaggagggtaaaaaaggtccaaagcgg
tcgtttgagcggaaacggaggtccaagaggggtaaagaaaatgccccgagagattcatcc
tcgagtgaggaagaggaggagcaggcagcagactctggagaggatagcagtgatcagcag
aagatcaaacctatcctcgattctgccatgccccacatggatgctttccatcagtcatca
ggagacgaagctcaactgaaggaggaaccctctcggatggtcgatgacgacgacgaccct
gagaatagaattgcaaagaagatgctgttggctcagatcaaagccaattactcgtcaggg
gacgacagctcttcagaagacgaagactgcaaaaaagacaccgaggaaaagtcatcagct
aaagcgaagaacgacggcagctccgaaggcgaagaagaggaagaggactctgattccggt
tcggaagtggacgtgaaaaaggccgggcggagacacaagctgctccgcaagaagctgacg
ctgagcgagggcgagtccgacaacgacaaaccgtccaagagcaataaagaggccaagaga
agaggaagacggaaagtgagcagcgacgagtccgccgattcagacttcaaacgctcagcc
tccggttcatcgagcgagtcggcgctgagtgaggaagtgagcgaggacgatgaggacagc
aagagtaacaaacgcagaacgcgatcctccaaaaaaacagagaaagacggcgaaaggagt
taccagaaagagaagaagaaaaagaggcggcggataaaagttcaagacgactcctccagc
aacaagagtgcagaggaaggggacgaggaagacggagaaggggacgatgaaaagggcacg
ccgaagggccgcaagaagatccgcaagatcctgaaagatgacaagctgcgctccgagacc
cagaacgcgctgaaagaggaagaagagaggcgtaaacgaatagctgaaaaagagcggctg
agagaaaaactacgtgagacgatcgtggtggaggaatcctcgcagatcgcctgtcccatt
actacgaaactggtcctggatgaggatgaagagaccaaggagcctctcgtccaagtccac
agaaacatggtgaccaagctgaagccccatcaagtggacggcgtgcagttcatttgggat
tgctgttgtgagtctgtgaaaaagactctgaagtcagccggctctggctgtatcctggct
cactgtatgggtctggggaaaacccttcaggtggtgacgtttctccacaccgtgcttctg
tgcgagaagctcaacttctccacggctttggtggtgtgtcccctcaacaccgtcctcaac
tggctgaacgagttcgagaagtggcaggagggcttgaaagatgaggagagcttagaggtg
actgagctggccacggtgaagaggcctcaagagcgagcgtacgccctgcagcgctggcat
gaagacggcggcgtcatgatcatcggttacgaaatgtaccgcaacctaacgcaaggccgc
aacatcaagagcaaaaagctcaaagagacgctccagaagaccctcgttgacccaggtcca
gactttgttatttgcgacgagggccacgtgttgaagaacgaagcgtcggccgtgtccaaa
gccatgaactccattaagacccgtcgaagagtggtgctgaccggaacgccgcttcagaac
aacctgattgagtaccactgcatggtaaacttcatcaaagagaacttgctgggctcggtg
aaagagttcaggaaccgtttcatcaaccccatccaaaatggccagtgcgccgactccacg
atggtcgacgtgcgcatcatgaagaaacgagcgcacattctctacgagatgctggccgga
tgcgtccaaagaagagactacaccgcacttactaagttcctgccgcccaaacacgagtac
gtgctcgcggtgcggatgacgccaatccagtgcaagctgtacagatactatctggagcac
tttacaggtgtcggttctgccttggaggggggaagaggccgtgcgggcacaaagcttttc
caggatttccagatgctcagcagaatctggacccatccttggtgtctccagctggactat
atcagtaaggaaaacaagggctacttcgacgaggacagcatggacgagttcatcgcgtcc
gaaacggaggagtcgtcgatgagcctgacttccgaagacgagaaacccaaaaggaagaag
aaacgggggaaaggcaaaggcgagagctcggacaagtccgacagcgacgacgtggaggtg
attaaggagtggaacacgagctcccgtggaggaaacccagaggggaggaacagagccgag
cctgtagaagaagttcgtccgagcaactccggccccggcagcccgtctcccgactggtac
aaggaatttgtgaccgaagcggatgccgaagttctggaacactctggaaaaattgtgctg
ctgttcgaaattctgcgaatggcggaagacgtggaagataaagttttggtgttcagtcag
tccctcatttcactggacctcatcgaggatttcctggagttagcaggcagggccaaagag
gaaggaaaaccctctccttacaaaggtgagggcaagtggttcagaaacattgactactac
cgactggatggttctaccaatgccattactaggaagaaatgggctgaagaattcaatgac
accagcaacgttcggggtcgtctttttctcatctcgacaagagctggttctctagggatc
aacctagtggcagcaaaccgggtcatcatcttcgatgcctcgtggaatccgtcctatgac
attcagagtattttcagggtgtaccgcttcggccaactgaaaaccgtgtacgtctacagg
tttttggctcagggaaccatggaggataagatttacgacaggcaggtgaccaaacagtcc
ctatcattccgtgtggtggaccaacagcagattgagcgccacttcaccatgaacgaactg
actgaactctacagtttcgagccagaccagctggatgacccgtcggaaaagaaaagcaag
aggtccacacccatgttacccaaggacccaattctcgctgagctacttcaaaacttcaag
gatcagattgtgggttaccacgagcatgattctctgctggaccacaaagaggaggaggct
ttgagtgaggaggaacgtaaggccgcttgggccgagtatgaggcagagaaaaagggtctc
tccatgcgcttcaaccagccggcgtatccttccgtaggcatcggaggatcgtccaactac
ttccccttcaacgtggcagctctggcctctatgtccaaccagcagctggaggacctgatc
aaccagggtcgacagaaggtgttggaggccaccaacgctctgaagtctttgccccgggag
ccgcttgaggacatcgtcgggcaggtgtggaaggagaatcccagtctgtcagaggcccag
gtgcagggcatggctctggccagacaggcaaccatcgacatggagctgaaacacagagag
gccgtgtaccgagacattctcaataagcagcagacgctgatgatgtatgtgcagaaggtg
atcgccaatcgaaaggttcaggagcagcagctggcgcttgccaggcaggggatactgatg
aaccagctggcccttcagaacggcatcgctgggggaatgagtcagatggaactgctgggc
ctgtaccaacagctgggtgccctccagggtctgccaacctcccagataggcaagaaccca
gggccctcaaagggcctgtag
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