Ictalurus furcatus (blue catfish): 128611091
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Entry
128611091 CDS
T09387
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128611091 (ptbp2a)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128611091 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128611091
NCBI-ProteinID:
XP_053486330
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All DBs
Position
1:17753355..17777567
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AA seq
510 aa
AA seq
DB search
MDGISDVAVGVKRGSDELLSGSMYNSPNSGMSSISDGTSNGSDSKKLRVEERVGEAPPSR
VLHIRKLPSEVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTP
HIRNVPVFIQYSNHKELKTETNQSGTPTSGSSDGTLSTPSSPVLRIIIDNMFYPVTLDVL
QQIFSKFGTVMKIITFTKNNQFQALLQYNDAASAQQAKVALDGQNIYNACCTLRIDYSKL
VNLNVKYNNDKSRDYTRPELPAGDGQPAVDPSVAAAFGKDSNSLLGKIPGALSPLSAAAA
AAAAAGRVALSGHSGNGVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQ
MADMNQAQLAMSHLNGQKMYSKIIRVTLSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFKK
PGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFTNSGGTVKAFKFFQDRKMALIQLSTV
EESIQCLIDLHNYNMGNNHHLRVSFSKSTI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggtgtaaagagggggtcagatgagctgttgtcc
ggcagcatgtacaacagtcccaactcggggatgagcagtatcagtgatggcacatccaac
ggaagtgacagtaaaaaattgagagttgaagaaagggtgggagaggctcctccatcacgt
gttcttcatataaggaaactacccagtgaggtctcggagacagagatcattgccttagga
ttgccctttggaaaggtcactaatatccttaccttgaaaggcaaaaaccaggcattccta
gagcttagtacggaagaagccgctattaccatggtgaactactattcagctgttacacca
catattcgaaatgttcccgtcttcattcagtattcaaatcacaaagagctcaagactgag
acaaaccagtctggaacacctacatcaggctccagtgacggcacactctcgacacccagc
agtccagtcttgaggattatcatagacaacatgttctaccctgtcactctagatgtgttg
cagcagatcttctcaaagtttggcacagttatgaaaatcatcactttcacaaagaacaat
cagtttcaggccttgctacagtataatgatgcagcgagtgctcagcaagccaaagtggca
ctcgatggtcagaacatatacaatgcttgctgtacgctccgtatagactactccaagctt
gtcaacctgaatgtgaagtacaacaatgataagagcagggactacactagaccggaactg
cctgcgggtgatgggcagcctgctgtggacccctcggtggcagcggcctttggcaaagac
tcgaactctctgctcggtaagatcccaggtgctctgagtcctctgagtgcggcggcggca
gcggcggcggcggcaggtcgagtggctctgtctggacactctggtaacggagtgctcctg
gttagcaatctcaatgatgagatggttacgccccaaagtctgtttaccctcttcggggtg
tatggtgacgtgcagcgtgtgaagatcctctacaacaaaaaagatagtgcactgatacag
atggcagatatgaatcaggcccaacttgcaatgagtcatcttaatggccagaagatgtat
tcaaaaatcatccgtgtgaccttgtccaagcatcagacagttcagttacccagagatggc
ttggatgatcaaggcctcaccaaggatttcacgaattctcctctacatcgtttcaagaag
cctggctccaaaaacttccagaacatcttccctccctctgccaccctgcatttgtcaaac
atcccgcaagacataactgaagacgacctcagagtactgtttactaactccggaggcact
gtgaaagcgttcaaatttttccaagatcgcaaaatggctctaattcagttatctactgtt
gaagagtccattcagtgcttgatcgacctacacaactacaacatgggtaacaatcaccat
ctgagggtctcattctccaaatcaacaatataa
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